MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_LR881938 Location: 4516733..4528523 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_LR881938 Location: 4516733..4528523 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEU92_RS21725 () | 4512424..4513737 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| IEU92_RS21730 () | 4513749..4514027 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| IEU92_RS21735 () | 4514024..4515145 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| IEU92_RS21740 () | 4515390..4515506 | - | 117 | Protein_4226 | VOC family protein | - |
| IEU92_RS21745 () | 4515544..4515762 | - | 219 | Protein_4227 | hypothetical protein | - |
| IEU92_RS21750 () | 4515931..4516677 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| IEU92_RS21755 () | 4516733..4517278 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| IEU92_RS21760 () | 4517290..4517547 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| IEU92_RS21765 () | 4517924..4518169 | - | 246 | Protein_4231 | GNAT family N-acetyltransferase | - |
| IEU92_RS21770 () | 4518285..4519525 | + | 1241 | Protein_4232 | DNA helicase | - |
| IEU92_RS21775 () | 4520108..4521088 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| IEU92_RS21780 () | 4521153..4522259 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| IEU92_RS21785 () | 4522279..4522995 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| IEU92_RS21790 () | 4524451..4525053 | + | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| IEU92_RS21795 () | 4525531..4526127 | + | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| IEU92_RS21800 () | 4526609..4527157 | + | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| IEU92_RS21805 () | 4527222..4527761 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| IEU92_RS21810 () | 4527798..4528523 | + | 726 | WP_000066547.1 | Chaperone protein FimC | VF |
| IEU92_RS21815 () | 4528590..4531226 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| IEU92_RS21820 () | 4531236..4531766 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| IEU92_RS21825 () | 4531779..4532282 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| IEU92_RS21830 () | 4532302..4533204 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |