MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP014270 Location: 4438440..4450230 Organism: Escherichia coli K-12 strain K-12 DHB4 Replicon: chromosome
Accession: NZ_CP014270 Location: 4438440..4450230 Organism: Escherichia coli K-12 strain K-12 DHB4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DHB4_RS21980 () | 4434131..4435444 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| DHB4_RS21985 () | 4435456..4435734 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| DHB4_RS21990 () | 4435731..4436852 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| DHB4_RS27070 () | 4437097..4437213 | - | 117 | Protein_4178 | VOC family protein | - |
| DHB4_RS26245 () | 4437251..4437469 | - | 219 | Protein_4179 | hypothetical protein | - |
| DHB4_RS21995 () | 4437638..4438384 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| DHB4_RS22000 () | 4438440..4438985 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| DHB4_RS22005 () | 4438997..4439254 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| DHB4_RS26775 () | 4439631..4439876 | - | 246 | Protein_4183 | GNAT family N-acetyltransferase | - |
| DHB4_RS22020 () | 4439992..4441232 | + | 1241 | Protein_4184 | helicase YjhR | - |
| DHB4_RS22025 () | 4441815..4442795 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| DHB4_RS22030 () | 4442860..4443966 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| DHB4_RS22035 () | 4443986..4444702 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| DHB4_RS22050 () | 4446158..4446760 | + | 603 | WP_000790583.1 | type 1 fimbria switch DNA invertase FimB | - |
| DHB4_RS22055 () | 4447238..4447834 | + | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| DHB4_RS22065 () | 4448316..4448864 | + | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| DHB4_RS22070 () | 4448929..4449468 | + | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| DHB4_RS22075 () | 4449505..4450230 | + | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| DHB4_RS22080 () | 4450297..4452933 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| DHB4_RS22085 () | 4452943..4453473 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| DHB4_RS22090 () | 4453486..4453989 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| DHB4_RS22095 () | 4454009..4454911 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |