NZ_CP059043287975..299765

MGE detailed information

MGE type: Genomic_island        MGE length: 11791 bp
Accession: NZ_CP059043        Location: 287975..299765         Organism: Escherichia coli strain SY3626C1       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HZ987_RS01300 () 283666..284979 - 1314 WP_000460843.1 galactitol-specific PTS transporter subunit IIC -
HZ987_RS01305 () 284991..285269 - 279 WP_000722973.1 PTS sugar transporter subunit IIB -
HZ987_RS01310 () 285266..286387 - 1122 WP_000010829.1 M42 family metallopeptidase -
HZ987_RS01315 () 286786..287004 - 219 Protein_258 hypothetical protein -
HZ987_RS01320 () 287173..287919 - 747 WP_000354251.1 class I SAM-dependent methyltransferase -
HZ987_RS01325 () 287975..288520 - 546 WP_001309181.1 N-acetyltransferase Antitoxin Detail
HZ987_RS01330 () 288532..288789 - 258 WP_001054376.1 hypothetical protein Toxin Detail
HZ987_RS01335 () 289166..289411 - 246 Protein_262 GNAT family N-acetyltransferase -
HZ987_RS01340 () 289781..290767 + 987 WP_001323209.1 hypothetical protein -
HZ987_RS01345 () 291350..292330 - 981 WP_000991438.1 9-O-acetyl-N-acetylneuraminic acid deacetylase -
HZ987_RS01350 () 292395..293501 - 1107 WP_001309184.1 N-acetylneuraminate epimerase -
HZ987_RS01355 () 293521..294237 - 717 WP_001295734.1 N-acetylneuraminic acid outer membrane channel NanC -
HZ987_RS01360 () 295693..296295 + 603 WP_000790583.1 Tyrosine recombinase XerC VF
HZ987_RS01365 () 296773..297369 + 597 WP_000044711.1 Tyrosine recombinase XerD VF
HZ987_RS01370 () 297851..298399 + 549 WP_000695564.1 Type-1 fimbrial protein, A chain VF
HZ987_RS01375 () 298464..299003 + 540 WP_000824114.1 putative major fimbrial subunit LpfA VF
HZ987_RS01380 () 299040..299765 + 726 WP_000066547.1 Chaperone protein FimC VF
HZ987_RS01385 () 299832..302468 + 2637 WP_000121005.1 fimbrial usher FimD -
HZ987_RS01390 () 302478..303008 + 531 WP_001244827.1 type 1 fimbria minor subunit FimF -
HZ987_RS01395 () 303021..303524 + 504 WP_000870592.1 type 1 fimbria minor subunit FimG -
HZ987_RS01400 () 303544..304446 + 903 WP_000832247.1 type 1 fimbria D-mannose specific adhesin FimH -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20089 HG738867 4419085..4430625 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA6279 NC_000913 4533239..4545029 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21460 NC_007779 4537919..4549709 0
Escherichia coli BW2952 Genomic island TA23876 NC_012759 4469997..4481537 0.004
Escherichia coli DH1 Genomic island TA27426 NC_017638 4513009..4524807 0
Escherichia coli BW25113 Genomic island TA48705 NZ_CP009273 4523056..4534846 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68445 NZ_CP017979 4432698..4444488 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285034 NZ_HG738867 4419085..4430625 0.004