NZ_CP0622394523056..4534846

MGE detailed information

MGE type: Genomic_island        MGE length: 11791 bp
Accession: NZ_CP062239        Location: 4523056..4534846         Organism: Escherichia coli strain AML001_ev03       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IHN56_RS21775 () 4518747..4520060 - 1314 WP_000460843.1 galactitol-specific PTS transporter subunit IIC -
IHN56_RS21780 () 4520072..4520350 - 279 WP_000722973.1 PTS sugar transporter subunit IIB -
IHN56_RS21785 () 4520347..4521468 - 1122 WP_000010829.1 M42 family metallopeptidase -
IHN56_RS21790 () 4521713..4521829 - 117 Protein_4239 VOC family protein -
IHN56_RS21795 () 4521867..4522085 - 219 Protein_4240 hypothetical protein -
IHN56_RS21800 () 4522254..4523000 - 747 WP_000354251.1 class I SAM-dependent methyltransferase -
IHN56_RS21805 () 4523056..4523601 - 546 WP_001309181.1 N-acetyltransferase Antitoxin Detail
IHN56_RS21810 () 4523613..4523870 - 258 WP_001054376.1 hypothetical protein Toxin Detail
IHN56_RS21815 () 4524247..4524492 - 246 Protein_4244 GNAT family N-acetyltransferase -
IHN56_RS21820 () 4524862..4525848 + 987 WP_001323209.1 hypothetical protein -
IHN56_RS21825 () 4526431..4527411 - 981 WP_000991438.1 9-O-acetyl-N-acetylneuraminic acid deacetylase -
IHN56_RS21830 () 4527476..4528582 - 1107 WP_001309184.1 N-acetylneuraminate epimerase -
IHN56_RS21835 () 4528602..4529318 - 717 WP_001295734.1 N-acetylneuraminic acid outer membrane channel NanC -
IHN56_RS21840 () 4530774..4531376 + 603 WP_000790583.1 Tyrosine recombinase XerC VF
IHN56_RS21845 () 4531854..4532450 + 597 WP_000044711.1 Tyrosine recombinase XerD VF
IHN56_RS21850 () 4532932..4533480 + 549 WP_000695564.1 Type-1 fimbrial protein, A chain VF
IHN56_RS21855 () 4533545..4534084 + 540 WP_000824114.1 putative major fimbrial subunit LpfA VF
IHN56_RS21860 () 4534121..4534846 + 726 WP_000066547.1 Chaperone protein FimC VF
IHN56_RS21865 () 4534913..4537549 + 2637 WP_000121005.1 fimbrial usher FimD -
IHN56_RS21870 () 4537559..4538089 + 531 WP_001244827.1 type 1 fimbria minor subunit FimF -
IHN56_RS21875 () 4538102..4538605 + 504 WP_000870592.1 type 1 fimbria minor subunit FimG -
IHN56_RS21880 () 4538625..4539527 + 903 WP_000832247.1 type 1 fimbria D-mannose specific adhesin FimH -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20089 HG738867 4419085..4430625 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA6279 NC_000913 4533239..4545029 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21460 NC_007779 4537919..4549709 0
Escherichia coli BW2952 Genomic island TA23876 NC_012759 4469997..4481537 0.004
Escherichia coli DH1 Genomic island TA27426 NC_017638 4513009..4524807 0
Escherichia coli BW25113 Genomic island TA48705 NZ_CP009273 4523056..4534846 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68445 NZ_CP017979 4432698..4444488 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285034 NZ_HG738867 4419085..4430625 0.004