MGE detailed information
MGE type: Genomic_island MGE length: 11027 bp
Accession: NZ_CP049198 Location: 3290150..3301176 Organism: Escherichia coli strain E686 Replicon: chromosome
Accession: NZ_CP049198 Location: 3290150..3301176 Organism: Escherichia coli strain E686 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6000_RS15615 () | 3285629..3286132 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| G6000_RS15620 () | 3286145..3286675 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| G6000_RS15625 () | 3286685..3289321 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| G6000_RS15630 () | 3289388..3290113 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| G6000_RS15635 () | 3290150..3290689 | - | 540 | WP_000824114.1 | Type-1 fimbrial protein, A chain | VF |
| G6000_RS15640 () | 3290754..3291301 | - | 548 | Protein_3058 | Type-1 fimbrial protein, A chain | VF |
| G6000_RS15645 () | 3291704..3292378 | - | 675 | WP_126709165.1 | Tyrosine recombinase XerD | VF |
| G6000_RS15650 () | 3292856..3293458 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| G6000_RS15655 () | 3294914..3295630 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| G6000_RS15660 () | 3295650..3296756 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| G6000_RS15665 () | 3296821..3297801 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| G6000_RS15670 () | 3298384..3299624 | - | 1241 | Protein_3064 | DNA helicase | - |
| G6000_RS15675 () | 3299740..3299985 | + | 246 | Protein_3065 | GNAT family N-acetyltransferase | - |
| G6000_RS15680 () | 3300362..3300619 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| G6000_RS15685 () | 3300631..3301176 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| G6000_RS15690 () | 3301232..3301978 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| G6000_RS15695 () | 3302147..3302365 | + | 219 | Protein_3069 | hypothetical protein | - |
| G6000_RS24600 () | 3302403..3302519 | + | 117 | Protein_3070 | VOC family protein | - |
| G6000_RS15700 () | 3302764..3303885 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| G6000_RS15705 () | 3303882..3304160 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| G6000_RS15710 () | 3304172..3305485 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.003 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.007 |