MGE detailed information
MGE type: Genomic_island MGE length: 11030 bp
Accession: NZ_CP040456 Location: 4365455..4376484 Organism: Escherichia coli strain UPEC132 Replicon: chromosome
Accession: NZ_CP040456 Location: 4365455..4376484 Organism: Escherichia coli strain UPEC132 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FE252_RS22850 () | 4360934..4361437 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| FE252_RS22855 () | 4361450..4361980 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| FE252_RS22860 () | 4361990..4364626 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| FE252_RS22865 () | 4364693..4365418 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| FE252_RS22870 () | 4365455..4365994 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| FE252_RS22875 () | 4366059..4366607 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| FE252_RS22880 () | 4367090..4367686 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| FE252_RS22885 () | 4368164..4368766 | - | 603 | WP_000790583.1 | type 1 fimbria switch DNA invertase FimB | - |
| FE252_RS22890 () | 4370222..4370938 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| FE252_RS22895 () | 4370958..4372064 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| FE252_RS22900 () | 4372129..4373109 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| FE252_RS22905 () | 4373692..4374932 | - | 1241 | Protein_4110 | helicase YjhR | - |
| FE252_RS22910 () | 4375048..4375293 | + | 246 | Protein_4111 | GNAT family N-acetyltransferase | - |
| FE252_RS22915 () | 4375670..4375927 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| FE252_RS22920 () | 4375939..4376484 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| FE252_RS22925 () | 4376540..4377286 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| FE252_RS22930 () | 4377455..4377673 | + | 219 | Protein_4115 | hypothetical protein | - |
| FE252_RS27530 () | 4377711..4377827 | + | 117 | Protein_4116 | VOC family protein | - |
| FE252_RS22935 () | 4378072..4379193 | + | 1122 | WP_000010830.1 | M42 family metallopeptidase | - |
| FE252_RS22940 () | 4379190..4379468 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| FE252_RS22945 () | 4379480..4380793 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.002 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.006 |