Results

Job ID: wrVbGpMxFf
Sequence Name: NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Length: 4833062 bp
Number of predicted TA systems: 31
DetailLocus_tagT/ATypeProtein IDCoordinatesLengthStrandBLAST resultsHMMER results
Best hitFamilyBest hit domain
orf49ToxinIVORF4949122..49442106 a.a.-T10128yeeVCbtA_toxin (CbtA)
orf50AntitoxinORF5049476..49841121 a.a.-AT1042yeeUCbeA_antitoxin (CbeA)
NuclAT_22AntitoxinI-210466..21053267 bp-AT6344rdlD-
orf195ToxinORF195210581..21068835 a.a.+T6328ldrDLdr_toxin (Ldr)
NuclAT_23AntitoxinI-210949..21100658 bp-AT6344rdlD-
orf197ToxinORF197211064..21117135 a.a.+T6328ldrDLdr_toxin (Ldr)
NuclAT_24AntitoxinI-211432..21149059 bp-AT6344rdlD-
orf198ToxinORF198211547..21165435 a.a.+T6328ldrDLdr_toxin (Ldr)
orf279AntitoxinIIORF279307514..30778088 a.a.+AT200ataRCOG4453 (DUF1778)
orf280ToxinORF280307787..308314175 a.a.+T200ataTCOG2153 (ElaA)
orf338AntitoxinIIORF338374504..37480098 a.a.-AT303higAPRK10072 (HTH)
orf339ToxinORF339374859..375176105 a.a.-T6088higBRelE
orf380AntitoxinIIORF380417983..41815055 a.a.+--PF10832 (YhfG)
orf381ToxinORF381418140..418742200 a.a.+T10186VbhTPRK10347 (Fic)
orf587ToxinIIORF587611959..612423154 a.a.-T1047yhaVToxin_YhaV (YhaV)
orf588AntitoxinORF588612423..612758111 a.a.-AT1047prlFPrlF_antitoxin (PrlF)
orf815AntitoxinIVORF815861442..86170888 a.a.+AT6368cptB-
orf816ToxinORF816861689..862096135 a.a.+T6368cptACpta_toxin (Cpta)
orf966AntitoxinIIORF9661034805..103505382 a.a.+AT10130mazEPRK09798 (MazE)
orf967ToxinORF9671035053..1035388111 a.a.+T10130mazFPRK09907
NuclAT_25AntitoxinI-1058981..105903555 bp-AT10211sokX-
orf988ToxinORF9881059075..105922750 a.a.+T10211hokX-
orf1243AntitoxinIIORF12431329120..132938688 a.a.+AT439vapBCOG4456 (VagC)
orf1244ToxinORF12441329386..1329784132 a.a.+T439vapCPRK13725 (VapC)
orf1685ToxinIIORF16851792645..179294198 a.a.-T10079PrpTCOG3668 (ParE)
orf1686AntitoxinORF16861792943..179319483 a.a.-AT10079PrpATIGR02606 (CC2985)
orf1704AntitoxinIIORF17041819527..181981796 a.a.-AT6025ataCOG5606 (Ata)
orf1705ToxinORF17051819807..1820145112 a.a.-T6025tadCOG4679 (Tad)
orf1748AntitoxinIIORF17481869367..186961883 a.a.+AT1043yefMPRK11409 (YefM)
orf1749ToxinORF17491869615..186986984 a.a.+T1043yoeBPF06769 (YoeB)
NuclAT_0AntitoxinVIII-2026214..2026485272 bp-AT10165RyeA-
NuclT_0Toxin-2026344..2026447104 bp+T10165SdsR-
orf2187AntitoxinIIORF21872311821..231206079 a.a.+AT1041relBPRK11235 (RelB)
orf2188ToxinORF21882312060..231234795 a.a.+T1041relEPF05016 (ParE)
orf2344AntitoxinIIORF23442483281..2483718145 a.a.-AT10189hicBPF03681 (UPF0150)
orf2345ToxinORF23452483743..248391958 a.a.-T10189hicACOG1724 (HicA)
orf2447AntitoxinIIORF24472587670..2588431253 a.a.---PF12840 (HTH_20)
orf2448ToxinORF24482588454..2589200248 a.a.-T6104zeta-
NuclAT_17AntitoxinI-2737637..273770468 bp-AT6347rdlD-
orf2593ToxinORF25932737752..273785935 a.a.+T6326ldrDLdr_toxin (Ldr)
NuclAT_18AntitoxinI-2738172..273823564 bp-AT6347rdlD-
orf2594ToxinORF25942738288..273839535 a.a.+T6326ldrDLdr_toxin (Ldr)
NuclAT_19AntitoxinI-2738710..273877364 bp-AT6342rdlD-
orf2595ToxinORF25952738823..273893035 a.a.+T6326ldrDLdr_toxin (Ldr)
orf3336AntitoxinIIORF33363543573..3543947124 a.a.+AT10152TomB-
orf3337ToxinORF33373543973..354419172 a.a.+T10152Hha-
orf3369AntitoxinIIORF33693577650..3577961103 a.a.+AT4502itaRCOG4453 (DUF1778)
orf3370ToxinORF33703577945..3578487180 a.a.+T4502itaTCOG2153 (ElaA)
orf3574ToxinIIORF35743792473..379275192 a.a.+T10132hicA-
orf3575AntitoxinORF35753792744..3793100118 a.a.+AT10132hicBCOG1598 (HicB)
orf3577AntitoxinIIORF35773794116..379437686 a.a.+AT6290dinJPF04221 (RelB)
orf3578ToxinORF35783794379..379465792 a.a.+T6290yafQCOG3041 (YafQ)
NuclAT_21AntitoxinI-4067588..406764558 bp-AT10209sokC-
orf3816ToxinORF38164067637..406784669 a.a.+T10209hokC-
orf3884AntitoxinIVORF38844136285..4136599104 a.a.+AT1042yeeUCbeA_antitoxin (CbeA)
orf3885ToxinORF38854136630..4136971113 a.a.+T10198ykfICbtA_toxin (CbtA)
orf3998ToxinIIORF39984269419..4269733104 a.a.-T1049chpBPRK09812
orf3999AntitoxinORF39994269763..427001483 a.a.-AT1049chpSPRK11347 (ChpS)
orf4091ToxinVORF40914365771..436594457 a.a.-T6099ghoTToxin_GhoT_OrtT (ghoT)
orf4092AntitoxinORF40924365972..436626898 a.a.-AT6099ghoSGhoS
orf4324AntitoxinIIORF43244634785..463507596 a.a.-AT6088higAPRK10072 (HTH)
orf4325ToxinORF43254635076..4635387103 a.a.-T6088higBRelE

T/A: This shows the type of the protein. T for Toxin and A for Antitoxin.
This page lists unpaired toxins/antitoxins that were failed to predicted as TA systems in current parameter settings. To reduce the false positive rate, each listed unpaired toxin/antitoxin should have at least one BLAST hit. These unpaired toxins/antitoxins may need further manual checking.

Job ID: wrVbGpMxFf
Sequence Name: NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Length: 4833062 bp
Number of predicted orphan toxins/antitoxins: 34/72
DetailLocus_tagT/ATypeProtein IDCoordinatesLengthStrandBLAST resultsHMMER results
Best hitFamilyBest hit domain
orf139AntitoxinIIORF139150263..15047570 a.a.-AT6297b--
orf174AntitoxinIIORF174185206..18549696 a.a.-AT6088higAPRK10072 (HTH)
orf222AntitoxinIIORF222247069..247797242 a.a.+AT183--
orf242ToxinIIORF242265759..266601280 a.a.-T228parE-
orf256AntitoxinIIORF256286451..286810119 a.a.+AT10132hicBPF12441 (CopG)
orf461AntitoxinIIORF461481040..481702220 a.a.+AT6245vapBPF00440 (TetR_N)
orf519AntitoxinIIORF519544639..545205188 a.a.-AT10123relB-
orf552AntitoxinIIORF552578408..579292294 a.a.+AT6261relB-
orf559AntitoxinIIORF559586699..587202167 a.a.+AT6279yjhQPF13527 (Acetyltransf_9)
orf574AntitoxinIIORF574600431..601132233 a.a.-AT10115tsbA-
orf607ToxinIIORF607635624..636520298 a.a.+T76vapCPF00126 (HTH_1)
orf631AntitoxinIIORF631658726..659229167 a.a.-AT171higA-
orf633AntitoxinIIORF633660721..661137138 a.a.+AT10135higACOG5499 (HigA)
orf670ToxinIIORF670708267..70855796 a.a.-T6078lsoA-
orf703AntitoxinIIORF703740619..741503294 a.a.-AT10134NpoA-
orf810AntitoxinIIORF810856730..857473247 a.a.+AT10134NpoA-
orf878AntitoxinIIORF878926022..926783253 a.a.+AT10134NpoA-
orf976AntitoxinIIORF9761046116..1046901261 a.a.+AT10134NpoA-
orf1003ToxinIIORF10031074172..1074882236 a.a.+T6111vagD-
orf1037ToxinIIORF10371106104..1106514136 a.a.+T87vapC-
orf1069AntitoxinIIORF10691140067..1140597176 a.a.-AT10093phdPRK10870 (MprA)
orf1228AntitoxinIIORF12281314640..1315161173 a.a.-AT10073mazE-
orf1286AntitoxinIIORF12861374945..1375736263 a.a.+AT10134NpoA-
orf1319AntitoxinIIORF13191411267..1412124285 a.a.-AT183--
orf1351AntitoxinIIORF13511445263..1445778171 a.a.-AT6025ata-
orf1360AntitoxinIIORF13601449033..1449686217 a.a.-AT325higAsmart00530 (HTH_XRE)
orf1361AntitoxinIIORF13611449804..145001971 a.a.+AT325higAPF13560 (HTH_31)
orf1390AntitoxinIIORF13901469641..1470096151 a.a.+AT10133higA-
orf1394AntitoxinIIORF13941474276..147453686 a.a.-AT10132hicBPF01402 (RHH)
orf1591AntitoxinIIORF15911700978..1701739253 a.a.+AT10134NpoA-
orf1602ToxinIORF16021712651..1713382243 a.a.-T10171CD2517.1smart00422 (HTH_MERR)
orf1621AntitoxinIIORF16211741829..1742167112 a.a.-AT10014panA-
orf1623AntitoxinIIORF16231743331..174360390 a.a.+AT10117TsdA-
orf1627AntitoxinIIORF16271746346..1747092248 a.a.+AT10093phdPF00392 (GntR)
orf1642AntitoxinIIORF16421761271..176157099 a.a.-AT10169higAPRK09726 (HipB)
orf1794ToxinIIORF17941921385..192157362 a.a.+T10090mazF-
orf1953AntitoxinIIORF19532074269..2074616115 a.a.-AT950vapB-
orf2095AntitoxinIIORF20952224778..2225377199 a.a.-AT6245vapBPF00440 (TetR_N)
orf2120ToxinIIORF21202246236..224645171 a.a.-T10152Hha-
orf2126AntitoxinIIORF21262253361..2254128255 a.a.+AT10134NpoA-
orf2127AntitoxinIIORF21272254369..2254947192 a.a.+AT6245vapBPF00440 (TetR_N)
orf2155AntitoxinIIORF21552286286..2286900204 a.a.-AT6256relB-
orf2162AntitoxinIIORF21622294662..2295222186 a.a.-AT10030phdPF13420 (Acetyltransf_4)
orf2175AntitoxinIIORF21752304099..230422742 a.a.-AT727relB-
orf2177AntitoxinIIORF21772304551..2304958135 a.a.-AT1005relBPF01381 (HTH_3)
orf2189ToxinIORF21892312419..231257451 a.a.+T10039hokW-
orf2221ToxinIIORF22212336009..2336581190 a.a.+T3593hicA-
orf2271AntitoxinIIORF22712393040..239330688 a.a.+AT10195hipBPRK09726 (HipB)
orf2305AntitoxinIIORF23052437427..243771194 a.a.+AT6146higATIGR02607 (HigA)
orf2318ToxinIIIORF23182453894..2454787297 a.a.+T6365abiQ-
orf2337ToxinVORF23372475643..247581657 a.a.-T6099ghoTToxin_GhoT_OrtT (ghoT)
orf2348AntitoxinIIORF23482486497..2487033178 a.a.-AT10123relBPF13443 (HTH_26)
orf2392ToxinIIORF23922538065..2538391108 a.a.-T82vapC-
orf2421ToxinIIORF24212567351..2567791146 a.a.-T10100PfiT-
orf2442ToxinIORF24422583059..258321451 a.a.-T10039hokW-
orf2451AntitoxinIIORF24512590496..259075084 a.a.-AT6245vapBCOG3311 (AlpA)
orf2452AntitoxinIIORF24522590830..2591249139 a.a.+AT106mbcAPF12844 (HTH_19)
orf2464AntitoxinIIORF24642601001..260117457 a.a.-AT6032PsyrA-
orf2509AntitoxinIIORF25092648358..2648915185 a.a.-AT325higAPF13560 (HTH_31)
orf2651ToxinIORF26512794145..2794876243 a.a.+T10171CD2517.1smart00422 (HTH_MERR)
orf2678AntitoxinIIORF26782824202..2824897231 a.a.+AT6245vapBPF00440 (TetR_N)
orf2696AntitoxinIIORF26962841701..2842435244 a.a.-AT10134NpoA-
orf2701AntitoxinIIORF27012845790..2846311173 a.a.-AT3484--
orf2772AntitoxinIIORF27722919975..2920613212 a.a.-AT6245vapBPF00440 (TetR_N)
orf2826ToxinIIORF28262972926..2973435169 a.a.+T10152Hha-
orf2883ToxinIIORF28833043751..3044341196 a.a.-T6098--
orf2930AntitoxinIIORF29303100629..3101105158 a.a.-AT10197vagC-
orf2934ToxinIIORF29343103309..310356685 a.a.+T10008panT-
orf2990AntitoxinIIORF29903147901..3148659252 a.a.+AT611-PF08220 (HTH_DeoR)
orf3014AntitoxinIIORF30143178259..3178726155 a.a.-AT127higAPF01325 (Fe_dep_repress)
orf3047ToxinIIORF30473213356..3213808150 a.a.-T10192PhoH-
orf3096ToxinIIORF30963267106..3267828240 a.a.+T10099ccdBPF00392 (GntR)
orf3138AntitoxinIIORF31383317767..3318129120 a.a.+AT4250vapBPF01402 (RHH)
orf3181ToxinIIORF31813363006..3363473155 a.a.+T6252mazF-
orf3229ToxinIIORF32293411450..3412265271 a.a.+T10183zetaAAA_21 (AbiEii)
orf3236ToxinIORF32363422312..342246450 a.a.-T10211hokX-
orf3237ToxinIORF32373422815..342296750 a.a.-T10211hokX-
orf3298ToxinIIORF32983495816..3496526236 a.a.-T10105Rhs-
orf3314AntitoxinIIORF33143515722..3516117131 a.a.-AT6124higAsmart00530 (HTH_XRE)
orf3333AntitoxinIIORF33333537873..3538520215 a.a.-AT6245vapBPF00440 (TetR_N)
orf3441AntitoxinIIORF34413646657..364693291 a.a.+AT10117TsdA-
orf3452ToxinIIORF34523657202..3657975257 a.a.-T10093doc-
orf3498AntitoxinIIORF34983715899..3716753284 a.a.-AT183--
orf3502AntitoxinIIORF35023720532..3721389285 a.a.+AT183--
orf3530ToxinIIORF35303752827..3753201124 a.a.-T176-PRK09831
orf3534ToxinIIORF35343756204..3756920238 a.a.-T137mazFcd06171 (Sigma70_r4)
orf3581ToxinIIORF35813796497..3797075192 a.a.-T10178sam-T-
orf3591ToxinIIORF35913811337..3811837166 a.a.+T10179doc-
orf3690AntitoxinIIORF36903923699..3924115138 a.a.-AT183--
orf3691AntitoxinIIORF36913924203..3924796197 a.a.+AT6245vapBPF00440 (TetR_N)
orf3755AntitoxinIIORF37553992759..3993217152 a.a.-AT131vapB-
orf3778AntitoxinIIORF37784023153..4023968271 a.a.-AT10015panA-
orf3837AntitoxinIIORF38374090859..4091728289 a.a.+AT183--
orf3848ToxinIIORF38484102994..410314349 a.a.+T10195YjjJ-
orf3870AntitoxinIIORF38704123222..4123761179 a.a.+AT6130stbDPRK02854 (DnaT)
orf3871AntitoxinIIORF38714123764..4124501245 a.a.+AT10046AAA-ATPase-
orf3887AntitoxinIIORF38874137989..4138384131 a.a.+AT6033sanaADUF6088
orf4071AntitoxinIIORF40714342309..434245548 a.a.-AT10118EcnA-
orf4072AntitoxinIIORF40724342566..434269141 a.a.-AT10118EcnA-
orf4075AntitoxinIIORF40754344769..4345638289 a.a.+AT663mazE-
orf4096AntitoxinIIORF40964368818..4369537239 a.a.+AT10123relB-
orf4209ToxinIIORF42094499373..4499816147 a.a.+T10120KacTPRK10514
orf4247AntitoxinIIORF42474550376..4551080234 a.a.-AT6245vapBPF00440 (TetR_N)
orf4321AntitoxinIIORF43214633474..463374389 a.a.-AT4250vapB-
orf4322AntitoxinIIORF43224633962..463418072 a.a.-AT4250vapBCOG3905 (RHH)
orf4386ToxinIIORF43864703545..4704345266 a.a.-T843vapC-

T/A: This shows the type of the protein. T for Toxin and A for Antitoxin.