TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Toxin (Protein)


Predicted family mazF (T10130) Predicted domain PRK09907
Locus tag orf967 Length 111 a.a.
Coordinates 1035053..1035388 (+)

Antitoxin (Protein)


Predicted family mazE (AT10130) Predicted domain PRK09798 (MazE)
Locus tag orf966 Length 82 a.a.
Coordinates 1034805..1035053 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf964 1031144..1032445 + 1302 ORF964 Predicted ORF by PRODIGAL Version 1.20 -
orf965 1032493..1034727 + 2235 ORF965 Predicted ORF by PRODIGAL Version 1.20 -
orf966 1034805..1035053 + 249 ORF966 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf967 1035053..1035388 + 336 ORF967 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf968 1035459..1036250 + 792 ORF968 Predicted ORF by PRODIGAL Version 1.20 -
orf969 1036478..1038115 + 1638 ORF969 Predicted ORF by PRODIGAL Version 1.20 -
orf970 1038203..1039501 + 1299 ORF970 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin

PRK09907 (E-value: 1.8e-66, Score:219.1)

(1-111)

COG2337 (MazF) (E-value: 1.3e-17, Score:62)

(2-106)

PRK09812 (E-value: 1.7e-15, Score:55.1)

(1-108)

PF02452 (PemK) (E-value: 2.6e-06, Score:25.8)

(4-107)

Antitoxin

PRK09798 (MazE) (E-value: 1.7e-59, Score:196.1)

(1-82)

COG2336 (MazE) (E-value: 6.1e-34, Score:114.4)

(1-82)

smart00966 (AbrB) (E-value: 1.7e-21, Score:74.2)

(4-85)

PRK11347 (ChpS) (E-value: 3.7e-09, Score:34.6)

(4-83)

COG4456 (VagC) (E-value: 2.3e-08, Score:32)

(4-73)

TIGR02609 (doc) (E-value: 4.4e-06, Score:24.8)

(3-51)

TIGR01439 (AbrB) (E-value: 0.014, Score:13.2)

(12-52)


Sequences

Toxin        


Download         Length: 111 a.a.        Molecular weight: 12098.04 Da        Isoelectric Point: 8.2618

>ORF967 TA_10 Toxin
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPF
EVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG

Download         Length: 336 bp

>ORF967 TA_10 Toxin
ATGGTAAGCCGATACGTACCCGATATGGGCGATCTGATTTGGGTTGATTTTGACCCGACA
AAAGGTAGCGAGCAAGCTGGACATCGTCCAGCTGTTGTCCTGAGTCCTTTCATGTACAAC
AACAAAACAGGTATGTGTCTGTGTGTTCCTTGTACAACGCAATCAAAAGGATATCCGTTC
GAAGTTGTTTTATCCGGTCAGGAACGTGATGGCGTAGCGTTAGCTGATCAGGTAAAAAGT
ATCGCCTGGCGGGCAAGAGGAGCAACGAAGAAAGGAACAGTTGCCCCAGAGGAATTACAA
CTCATTAAAGCCAAAATTAACGTACTGATTGGGTAG

Antitoxin


Download         Length: 82 a.a.        Molecular weight: 9355.74 Da        Isoelectric Point: 4.4665

>ORF966 TA_10 Antitoxin
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVN
DITPENLHENIDWGEPKDKEVW

Download         Length: 249 bp

>ORF966 TA_10 Antitoxin
ATGATCCACAGTAGCGTAAAGCGTTGGGGAAATTCACCGGCGGTGCGGATCCCGGCTACG
TTAATGCAGGCGCTCAATCTGAATATTGATGATGAAGTGAAGATTGACCTGGTGGATGGC
AAATTAATTATTGAGCCAGTGCGTAAAGAGCCCGTATTTACGCTTGCTGAACTGGTCAAC
GACATCACGCCGGAAAACCTCCACGAGAATATCGACTGGGGAGAGCCGAAAGATAAGGAA
GTCTGGTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10130 Escherichia coli str. K-12 substr. MC4100 strain K-12

100

100

1
T1044 Escherichia coli str. K-12 substr. MG1655

100

100

1
T137 Deinococcus radiodurans R1

45.536

95.726

0.459
T10069 Klebsiella pneumoniae subsp. pneumoniae MGH 78578

44.545

98.214

0.441
T10090 Enterococcus faecalis ATCC 29212

32.955

77.876

0.261
T663 Streptococcus mutans UA159

29.703

91.818

0.27
T10067 Agrobacterium tumefaciens str. C58

38.947

79.832

0.333
T1852 Lactobacillus salivarius UCC118

30.928

85.088

0.27
T6120 Xylella fastidiosa

36.364

91.667

0.324
T6238 Lactobacillus rhamnosus ATCC 8530

34.884

74.783

0.27
T6142 Lactobacillus rhamnosus ATCC 8530

34.884

74.783

0.27
T6137 Lactobacillus rhamnosus Lc 705

34.884

74.783

0.27
T1049 Escherichia coli str. K-12 substr. MG1655

38.835

88.793

0.36
T10042 Candidatus Desulforudis audaxviator MP104C

37.736

89.831

0.36
T6252 Mycobacterium tuberculosis H37Rv

40.964

70.339

0.306
T911 Nitrosomonas europaea ATCC 19718

29.268

72.566

0.216
T1076 Shigella flexneri 2b

30.682

66.165

0.243
T6091 Staphylococcus aureus

28.261

82.143

0.234
T6141 Lactobacillus rhamnosus ATCC 8530

30.769

61.417

0.216
T6140 Lactobacillus rhamnosus GG

30.769

61.417

0.216
T6136 Lactobacillus rhamnosus Lc 705

30.769

61.417

0.216
T6135 Lactobacillus rhamnosus GG

30.769

61.417

0.216
T10131 Legionella pneumophila subsp. pneumophila str. Lorraine

26.596

88.679

0.225
T134 Bacillus subtilis subsp. subtilis str. 168

32.051

67.241

0.225
T1499 Bacillus anthracis str. Sterne

32.051

67.241

0.225
T10096 Clostridium difficile R20291

30.769

61.417

0.216
T10094 Staphylococcus aureus strain HG003 isolate RN1 Scaffold_3

25.641

65

0.18
T10078 Staphylococcus aureus strain HG003 isolate RN1 Scaffold_3

25.641

65

0.18
T1073 Staphylococcus aureus subsp. aureus N315

25.641

65

0.18
T612 Staphylococcus aureus subsp. aureus MW2

25.641

65

0.18
T6090 Staphylococcus equorum

22.222

90

0.216
T10177 Staphylococcus epidermidis isolate BPH0662

25.641

65

0.18
T101 Mycobacterium tuberculosis H37Rv

33.898

54.128

0.18
T10160 Mycobacterium tuberculosis H37Rv

32.877

68.868

0.216
T6248 Mycobacterium tuberculosis H37Rv

26.364

80.882

0.261
T6247 Mycobacterium tuberculosis H37Rv

35.484

27.193

0.099