TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Toxin (Protein)


Predicted family itaT (T4502) Predicted domain COG2153 (ElaA)
Locus tag orf3370 Length 180 a.a.
Coordinates 3577945..3578487 (+)

Antitoxin (Protein)


Predicted family itaR (AT4502) Predicted domain COG4453 (DUF1778)
Locus tag orf3369 Length 103 a.a.
Coordinates 3577650..3577961 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf3364 3572670..3573617 + 948 ORF3364 Predicted ORF by PRODIGAL Version 1.20 -
orf3365 3573639..3575630 + 1992 ORF3365 Predicted ORF by PRODIGAL Version 1.20 -
orf3366 3575620..3576234 + 615 ORF3366 Predicted ORF by PRODIGAL Version 1.20 -
orf3367 3576234..3576563 + 330 ORF3367 Predicted ORF by PRODIGAL Version 1.20 -
orf3368 3576575..3577465 + 891 ORF3368 Predicted ORF by PRODIGAL Version 1.20 -
orf3369 3577650..3577961 + 312 ORF3369 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf3370 3577945..3578487 + 543 ORF3370 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf3371 3578721..3579503 - 783 ORF3371 Predicted ORF by PRODIGAL Version 1.20 -
orf3372 3579875..3581239 + 1365 ORF3372 Predicted ORF by PRODIGAL Version 1.20 -
orf3373 3581367..3581858 - 492 ORF3373 Predicted ORF by PRODIGAL Version 1.20 -
orf3374 3582026..3582937 + 912 ORF3374 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin

COG2153 (ElaA) (E-value: 2.9e-05, Score:22)

(56-136)

PF00583 (GNAT) (E-value: 8.6e-05, Score:20)

(96-160)

PRK10314 (E-value: 0.0012, Score:16.8)

(69-133)

COG3818 (GNAT) (E-value: 0.0054, Score:14.6)

(92-146)

PTZ00330 (E-value: 0.039, Score:11.9)

(91-138)

Antitoxin

COG4453 (DUF1778) (E-value: 3.4e-17, Score:60.7)

(69-150)

PF08681 (DUF1778) (E-value: 3.1e-13, Score:47.7)

(8-91)

PF01402 (RHH) (E-value: 0.0076, Score:14.4)

(9-48)


Sequences

Toxin        


Download         Length: 180 a.a.        Molecular weight: 19805.02 Da        Isoelectric Point: 8.3395

>ORF3370 TA_24 Toxin
MVDKHEEITLPIVLSCNYQSDITYPGQKQFDCGNPVIDKFVRASLKKSVRNSDCAAKALI
DRQSGELIGICTFTAYSLEKQRVSGVLQGSQPSEIGVVRLVMLGVARKYQKRGFGQDLLC
DFFEHVKIIHQALPIKGVYLDADPAAINFYARLGFVQLSATPNAFGAVPMFLAIQHILAA

Download         Length: 543 bp

>ORF3370 TA_24 Toxin
ATGGTCGACAAGCATGAAGAGATTACTCTGCCCATAGTCCTCTCCTGTAATTATCAGTCT
GATATTACTTATCCTGGGCAAAAACAGTTTGATTGCGGTAACCCTGTTATCGATAAATTT
GTACGCGCATCGCTAAAGAAAAGTGTGCGTAATAGCGACTGTGCGGCTAAAGCACTTATT
GACAGACAAAGTGGTGAACTGATCGGCATCTGTACTTTTACGGCATATTCGCTGGAAAAA
CAACGCGTTTCTGGCGTCCTTCAGGGTTCACAACCTTCAGAAATTGGTGTTGTCAGATTA
GTCATGTTGGGGGTAGCACGGAAGTATCAAAAGCGGGGCTTTGGTCAGGACCTACTATGT
GATTTTTTTGAACATGTAAAAATAATTCACCAGGCATTACCAATTAAAGGGGTTTATCTT
GATGCTGACCCTGCCGCCATTAATTTTTATGCTCGTCTCGGCTTTGTTCAGCTTTCAGCG
ACACCAAATGCTTTTGGTGCTGTACCTATGTTTTTGGCGATTCAGCATATTCTCGCGGCT
TAG

Antitoxin


Download         Length: 103 a.a.        Molecular weight: 11358.04 Da        Isoelectric Point: 10.4825

>ORF3369 TA_24 Antitoxin
MPGKTATLPDVDKTLKNARVELKTSPDAKNKLREAAQAVGVDLSAFILSAAMERAESVLD
NQRRRELSNQSWELMNQLIAEPAQPTLALKALMKRKNSDGRQA

Download         Length: 312 bp

>ORF3369 TA_24 Antitoxin
ATGCCTGGAAAAACAGCCACTCTACCCGATGTCGATAAAACGCTGAAAAATGCGCGGGTC
GAACTCAAAACTAGTCCCGACGCCAAAAACAAACTTCGTGAAGCTGCGCAAGCCGTTGGG
GTAGATTTAAGCGCTTTTATTTTGAGCGCTGCTATGGAACGCGCCGAAAGTGTGCTTGAT
AACCAACGTCGCCGTGAGCTTTCGAATCAAAGCTGGGAACTGATGAACCAACTCATCGCT
GAACCTGCTCAACCGACGCTCGCCCTCAAGGCGTTAATGAAAAGGAAAAACAGCGATGGT
CGACAAGCATGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT4502 Escherichia coli HS

100

100

1
AT10120 Klebsiella pneumoniae subsp. pneumoniae HS11286

35.802

92.045

0.282
AT200 Escherichia coli O157:H7 str. EDL933

32.099

92.045

0.252
AT10041 Mycobacterium tuberculosis H37Rv

33.333

36.076

0.184
AT176 Vibrio cholerae O1 biovar El Tor str. N16961

28.571

62.222

0.155
AT165 Vibrio cholerae O1 biovar El Tor str. N16961

28.571

62.222

0.155