TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NULL
Predicted type II

Toxin (Protein)


Predicted family hicA (T10189) Predicted domain COG1724 (HicA)
Locus tag orf2345 Length 58 a.a.
Coordinates 2483743..2483919 (-)

Antitoxin (Protein)


Predicted family hicB (AT10189) Predicted domain PF03681 (UPF0150)
Locus tag orf2344 Length 145 a.a.
Coordinates 2483281..2483718 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin

COG1724 (HicA) (E-value: 0.0055, Score:14.8)

(7-66)

PF07927 (HicA) (E-value: 0.011, Score:13.8)

(20-78)

Antitoxin

PF03681 (UPF0150) (E-value: 1.2e-14, Score:52.4)

(11-88)

COG1598 (HicB) (E-value: 6.5e-10, Score:37.1)

(5-128)

HicB_lk_antitox (HicB) (E-value: 2.7e-08, Score:32)

(1-65)

PF13744 (HTH_37) (E-value: 0.0035, Score:15.3)

(38-88)

PRK01381 (E-value: 0.0051, Score:14.9)

(40-74)

HicB-like_2 (HicB) (E-value: 0.017, Score:13.3)

(12-78)

PRK09726 (HipB) (E-value: 0.05, Score:11.6)

(10-44)

COG3093 (VapI) (E-value: 0.023, Score:11.5)

(14-64)

PF03681 (UPF0150) (E-value: 320, Score:-0.6)

(84-110)


Sequences

Toxin        


Download         Length: 58 a.a.        Molecular weight: 6749.83 Da        Isoelectric Point: 11.2298

>ORF2345 TA_18 Toxin
VKQSEFRRWLESQGVDVANGSNHLKLRFHGRRSVMPRHPCDEIKEPLRKAILKQLGLS

Download         Length: 177 bp

>ORF2345 TA_18 Toxin
TTAACTCAAACCGAGTTGTTTCAGGATTGCTTTACGCAATGGTTCTTTAATCTCATCGCA
GGGGTGACGCGGCATGACACTGCGCCTCCCATGAAACCTGAGTTTCAAATGGTTGCTGCC
ATTCGCTACATCGACGCCCTGAGATTCGAGCCAACGTCTGAACTCGCTTTGTTTCAC

Antitoxin


Download         Length: 145 a.a.        Molecular weight: 16034.56 Da        Isoelectric Point: 4.6420

>ORF2344 TA_18 Antitoxin
MRGTVEIMRYPVTLTPAPEGGYMVSFVDIPEALTQGETVAEAMEAAKDALLTAFDFYFED
NELIPLPSPLNSHDHFIEVPLSVASKVLLLNAFLQSEITQQELARRIGKPKQEITRLFDL
HHATKIDAVQLAAKALGKELSLVMV

Download         Length: 438 bp

>ORF2344 TA_18 Antitoxin
TTAAACCATCACCAGCGATAACTCTTTGCCAAGCGCCTTTGCCGCGAGCTGGACGGCGTC
GATTTTTGTCGCATGATGCAAGTCAAATAGGCGAGTAATCTCCTGTTTAGGTTTGCCAAT
TCGCCTGGCTAACTCTTGCTGAGTGATTTCTGACTGTAAAAAAGCATTTAACAGCAATAC
CTTAGAGGCGACGCTCAAAGGTACTTCAATAAAGTGATCATGACTATTTAATGGCGAAGG
TAAAGGGATAAGCTCGTTATCTTCAAAATAAAAATCAAATGCGGTCAGTAAAGCATCTTT
TGCCGCTTCCATCGCTTCAGCGACAGTTTCGCCCTGCGTCAACGCTTCAGGGATATCCAC
AAAAGAAACCATATAACCGCCTTCCGGCGCGGGTGTAAGAGTGACGGGATAACGCATAAT
TTCGACTGTCCCTCGCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10189 Escherichia coli strain DH5alpha

100

100

1
T1039 Escherichia coli str. K-12 substr. MG1655

100

100

1
T6283 Pseudomonas aeruginosa PA1

47.458

98.333

0.483
Protein Organism Identities (%) Coverage (%) Ha-value
AT10189 Escherichia coli strain DH5alpha

99.275

100

0.945
AT1039 Escherichia coli str. K-12 substr. MG1655

99.275

100

0.945
AT6283 Pseudomonas aeruginosa PA1

30.833

50.209

0.255
AT3593 Acinetobacter baumannii ATCC 17978

28.302

73.611

0.207
AT10168 Streptococcus pneumoniae TIGR4

38.983

39.333

0.159
AT875 Sinorhizobium meliloti 1021

38.462

33.987

0.138
AT6107 Burkholderia pseudomallei K96243

27.273

31.884

0.083