TADB

TAfinder detailed results

Overview
Genomic Context
Domains
Sequences
Similar Proteins

Overview

Job ID	wrVbGpMxFf
Sequence name	NULL
Predicted type	I

Toxin (Protein)

Predicted family	ldrD (T6328)	Predicted domain	Ldr_toxin (Ldr)
Locus tag	orf195	Length	35 a.a.
Coordinates	210581..210688 (+)

Antitoxin (RNA)

Predicted family	rdlD (AT6344)	Predicted domain	-
Locus tag	NuclAT_22	Length	67 bp
Coordinates	210466..210532 (-)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin

Ldr_toxin (Ldr) (E-value: 1.9e-27, Score:93.1)

(1-35)

Sequences

Download Length: 35 a.a. Molecular weight: 3882.70 Da Isoelectric Point: 9.0157

                                        >ORF195 TA_2 Toxin

MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK

Download Length: 108 bp

                                        >ORF195 TA_2 Toxin

ATGACGCTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGCTCCGGTCATTGCT

GGCATTCTTGCCAGTATGATCGTGAACTGGCTGAACAAGCGGAAGTAG

Antitoxin

Nucleotide

Download Length: 67 bp

                                        >NuclAT_22 TA_2 Antitoxin

GAGAAAACCCCCGCACGTTGCAGGTATGTACCTGACAACATAACGGGGGCTAATCTTGAA

CCTAGAC

Similar Proteins

Only experimentally validated proteins are listed.

Toxin
Antitoxin

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
T6328	Escherichia coli str. K-12 substr. MC4100	97.143	100	0.971
T6348	Escherichia coli K-12 strain ER3413	97.143	100	0.971
T6340	Escherichia coli str. K-12 substr. MDS42	97.143	100	0.971
T6336	Escherichia coli str. K-12 substr. DH10B	97.143	100	0.971
T6344	Escherichia coli str. K-12 substr. W3110	97.143	100	0.971
T6332	Escherichia coli str. K-12 substr. MG1655	97.143	100	0.971
T6326	Escherichia coli str. K-12 substr. MC4100	60	100	0.6
T6346	Escherichia coli K-12 strain ER3413	60	100	0.6
T6338	Escherichia coli str. K-12 substr. MDS42	60	100	0.6
T6334	Escherichia coli str. K-12 substr. DH10B	60	100	0.6
T6342	Escherichia coli str. K-12 substr. W3110	60	100	0.6
T6330	Escherichia coli str. K-12 substr. MG1655	60	100	0.6
T6327	Escherichia coli str. K-12 substr. MC4100	60	100	0.6
T6325	Escherichia coli str. K-12 substr. MC4100	60	100	0.6
T6347	Escherichia coli K-12 strain ER3413	60	100	0.6
T6345	Escherichia coli K-12 strain ER3413	60	100	0.6
T6339	Escherichia coli str. K-12 substr. MDS42	60	100	0.6
T6337	Escherichia coli str. K-12 substr. MDS42	60	100	0.6
T6335	Escherichia coli str. K-12 substr. DH10B	60	100	0.6
T6333	Escherichia coli str. K-12 substr. DH10B	60	100	0.6
T6343	Escherichia coli str. K-12 substr. W3110	60	100	0.6
T6341	Escherichia coli str. K-12 substr. W3110	60	100	0.6
T6331	Escherichia coli str. K-12 substr. MG1655	60	100	0.6
T6329	Escherichia coli str. K-12 substr. MG1655	60	100	0.6

Protein	Organism	Identities (%)	Coverage (%)	H_a-value