 TA006322
Link to T1TAdb |
Prophage |
Bacillus subtilis subsp. subtilis str. 168 (chromosome) |
NC_000964 |
BSU26050 (txpA) |
BSU_misc_RNA_81 (ratA) |
txpA-ratA/- |
TA006323
Link to T1TAdb |
Prophage |
Bacillus subtilis subsp. subtilis str. 168 (chromosome) |
NC_000964 |
BSU21000 (yonT) |
BSU_misc_RNA_90 (SR6) |
yonT-SR6/- |
TA006321
Link to T1TAdb |
Prophage |
Bacillus subtilis subsp. subtilis str. 168 (chromosome) |
NC_000964 |
BSU21546 (bsrG) |
BSU_misc_RNA_77 (as-bsrG) |
bsrG-as-bsrG/- |
| TA06323b |
Prophage |
Bacillus subtilis subsp. subtilis str. 168 (chromosome) |
NC_000964 |
BSU_20999 (yoyJ) |
- |
yoyJ-SR6/- |
TA010200
Link to T1TAdb |
Prophage |
Bacillus subtilis subsp. subtilis str. 168 (chromosome) |
NC_000964 |
BSU_18978 (bsrE) |
- (as-bsrE) |
bsrE-as-bsrE/- |
TA010201
Link to T1TAdb |
Prophage |
Bacillus subtilis subsp. subtilis str. 168 (chromosome) |
NC_000964 |
BSU_26055 (bsrH) |
- (as-bsrH) |
bsrH-as-bsrH/- |
| TA006287 |
Plasmid |
Campylobacter jejuni subsp. jejuni 81-176 (plasmid pVir) |
NC_008770 |
CJJ81176_pVir0047 (cjpT) |
CJJ81176_pVir0047a (cjrA) |
cjpT-cjrA/- |
TA010173
Link to T1TAdb |
Prophage |
Clostridium difficile 630 (chromosome) |
NC_009089 |
CD630_RS19695 (CD0956.2) |
- (RCd10) |
CD-RCd/- |
TA010172
Link to T1TAdb |
Prophage |
Clostridium difficile 630 (chromosome) |
NC_009089 |
CD630_RS19840 (CD2907.1) |
- (RCd9) |
CD-RCd/- |
TA010174
Link to T1TAdb |
- |
Clostridium difficile 630 (chromosome) |
NC_009089 |
CD630_RS19720 (CD1418.2) |
- (CD630_n00500) |
CD-RCd/- |
TA010175
Link to T1TAdb |
- |
Clostridium difficile 630 (chromosome) |
NC_009089 |
- (CD1233.1) |
- (SQ808) |
CD-RCd/- |
TA010171
Link to T1TAdb |
- |
Clostridium difficile 630 (chromosome) |
NC_009089 |
CD630_RS19820 (CD2517.1) |
- (RCd8) |
CD-RCd/- |
TA010080
Link to T1TAdb |
Prophage |
Clostridium difficile 630 (chromosome) |
NC_009089 |
CD630_RS19700 (CD0977.1) |
- (RCd11) |
CD-RCd/- |
TA010081
Link to T1TAdb |
Prophage |
Clostridium difficile 630 (chromosome) |
NC_009089 |
CD630_RS19835 (CD2889) |
- (RCd12) |
CD-RCd/- |
TA010176
Link to T1TAdb |
Prophage |
Clostridium difficile 630 (chromosome) |
NC_009089 |
CD630_RS19805 (CD2299.1) |
- (SQ1641) |
CD-RCd/- |
TA010082
Link to T1TAdb |
Prophage |
Clostridium difficile 630 (chromosome) |
NC_009089 |
- (CD0904.1) |
- (RCd13) |
CD-RCd/- |
TA010083
Link to T1TAdb |
Prophage |
Clostridium difficile 630 (chromosome) |
NC_009089 |
- (CD0956.3) |
- (RCd14) |
CD-RCd/- |
TA010084
Link to T1TAdb |
Prophage |
Clostridium difficile 630 (chromosome) |
NC_009089 |
- (CD2907.2) |
- (RCd15) |
CD-RCd/- |
TA010211
Link to T1TAdb |
IS/Tn |
E.coli NADPH-sulfite reductase flavoprotein component (cysJ) NADPH-sulfite reductase hemoprotein component (cysI) and 3' (chromosome) |
M23008 |
- (hokX) |
- (sokX) |
hok-sok/- |
TA006359
Link to T1TAdb |
Plasmid |
Enterococcus faecalis (plasmid pAD1) |
NG_034485 |
Fst (fst) |
RNAII (RNAII) |
fst-RNAII/- |
TA010204
Link to T1TAdb |
- |
Enterococcus faecalis V583 (chromosome) |
NC_004668 |
EF_RS16860 (txpA) |
- (ratA) |
txpA-ratA/- |
TA010028
Link to T1TAdb |
Plasmid |
Enterococcus faecalis V583 (plasmid pTEF2) |
NC_004671 |
EF_RS16055 (fst) |
(RNAII) |
fst-RNAII/- |
TA010029
Link to T1TAdb |
- |
Enterococcus faecalis V583 (chromosome) |
NC_004668 |
EF_RS02030 (fst) |
(RNAII) |
fst-RNAII/- |
| TA006278 |
- |
Enterococcus faecalis V583 (chromosome) |
NC_004668 |
EF_3263 (txpA) |
EF_3263a (ratA) |
txpA-ratA/- |
TA010202
Link to T1TAdb |
- |
Enterococcus faecalis V583 (chromosome) |
NC_004668 |
EF_RS14625 (txpA) |
- (ratA) |
txpA-ratA/- |
TA010203
Link to T1TAdb |
- |
Enterococcus faecalis V583 (chromosome) |
NC_004668 |
EF_RS14630 (txpA) |
- (ratA) |
txpA-ratA/- |
TA010207
Link to T1TAdb |
Plasmid |
Enterococcus faecalis V583 (plasmid pTEF1) |
NC_004669 |
EF_RS16890 (txpA) |
- (ratA) |
txpA-ratA/- |
TA010206
Link to T1TAdb |
- |
Enterococcus faecalis V583 (chromosome) |
NC_004668 |
EF_RS16775 (txpA) |
- (ratA) |
txpA-ratA/- |
TA010205
Link to T1TAdb |
- |
Enterococcus faecalis V583 (chromosome) |
NC_004668 |
EF_RS15355 (txpA) |
- (ratA) |
txpA-ratA/- |
| TA010124 |
- |
Erwinia amylovora ATCC 49946 (chromosome) |
NC_013971 |
EAM_RS19805 (hok) |
- (sok) |
hok-sok/- |
| TA006370 |
Plasmid |
Escherichia coli (plasmid pIFM3804) |
NC_023329 |
D616_p112058 (pndA) |
D616_s112002 (pndB) |
hok-sok/- |
TA006324
Link to T1TAdb |
Plasmid |
Escherichia coli (plasmid R1) |
NG_034386 |
hok (hok) |
sok (sok) |
hok-sok/- |
TA006349
Link to T1TAdb |
- |
Escherichia coli BW2952 (chromosome) |
NC_012759 |
BWG_3365 (tisB) |
BWG_4258 (istR) |
tisB-istR/- |
| TA006351 |
GI |
Escherichia coli BW2952 (chromosome) |
NC_012759 |
BWG_4040 (symE) |
BWG_4265 (symR) |
symER/- |
TA010208
Link to T1TAdb |
- |
Escherichia coli C (chromosome) |
NZ_CP020543 |
B6N50_RS01665 (hokA) |
- (sokA) |
hok-sok/- |
| TA006369 |
Plasmid |
Escherichia coli K-12 (plasmid F) |
NC_002483 |
D616_p97086 (srnB) |
D616_s97001 (srnC) |
hok-sok/- |
| TA006346 |
- |
Escherichia coli K-12 strain ER3413 (chromosome) |
CP009789 |
ER3413_1231 (rdlD) |
ER3413_4643 (rdlD) |
ldrD-rdlD/- |
| TA006348 |
IS/Tn |
Escherichia coli K-12 strain ER3413 (chromosome) |
CP009789 |
ER3413_3639 (ldrD) |
ER3413_4669 (rdlD) |
ldrD-rdlD/- |
| TA006347 |
- |
Escherichia coli K-12 strain ER3413 (chromosome) |
CP009789 |
ER3413_1232 (ldrD) |
ER3413_4644 (rdlD) |
ldrD-rdlD/- |
| TA006345 |
- |
Escherichia coli K-12 strain ER3413 (chromosome) |
CP009789 |
ER3413_1230 (ldrD) |
ER3413_4642 (rdlD) |
ldrD-rdlD/- |
TA010218
Link to T1TAdb |
Prophage |
Escherichia coli O157:H7 str. EDL933 (chromosome) |
NC_002655 |
Z_RS11255 (ralR) |
- (ralA) |
ralRA/- |
TA006361
Link to T1TAdb |
- |
Escherichia coli O157:H7 str. EDL933 (chromosome) |
NC_002655 |
Z3289 (ZorO) |
orzO (OrzO) |
Zor-Orz/- |
TA010213
Link to T1TAdb |
- |
Escherichia coli O157:H7 str. EDL933 (chromosome) |
NC_002655 |
- (zorP) |
- (orzP) |
Zor-Orz/- |
TA010219
Link to T1TAdb |
Prophage |
Escherichia coli O157:H7 str. Sakai (chromosome) |
NC_002695 |
- (ralR) |
- (ralA) |
ralRA/- |
| TA010039 |
Prophage |
Escherichia coli O157:H7 str. Sakai (chromosome) |
NC_002695 |
- (hokW) |
- (sokW) |
hok-sok/- |
TA010209
Link to T1TAdb |
- |
Escherichia coli strain ECOR24 (chromosome) |
NZ_LYAM01000110 |
A8F87_RS08540 (hokC) |
- (sokC) |
hok-sok/- |
TA006333
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. DH10B (chromosome) |
NC_010473 |
ECDH10B_1269 (ldrD) |
ECDH10B_1270 (rdlD) |
ldrD-rdlD/- |
TA006334
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. DH10B (chromosome) |
NC_010473 |
ECDH10B_1271 (ldrD) |
ECDH10B_1272 (rdlD) |
ldrD-rdlD/- |
TA006335
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. DH10B (chromosome) |
NC_010473 |
ECDH10B_1273 (ldrD) |
ECDH10B_1274 (rdlD) |
ldrD-rdlD/- |
TA006336
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. DH10B (chromosome) |
NC_010473 |
ECDH10B_3716 (ldrD) |
ECDH10B_3717 (rdlD) |
ldrD-rdlD/- |
| TA006326 |
- |
Escherichia coli str. K-12 substr. MC4100 (chromosome) |
HG738867 |
BN896_1042 (ldrD) |
BN896_4217 (rdlD) |
ldrD-rdlD/- |
| TA006325 |
- |
Escherichia coli str. K-12 substr. MC4100 (chromosome) |
HG738867 |
BN896_1041 (ldrD) |
BN896_4216 (rdlD) |
ldrD-rdlD/- |
| TA006327 |
- |
Escherichia coli str. K-12 substr. MC4100 (chromosome) |
HG738867 |
BN896_1043 (ldrD) |
BN896_4218 (rdlD) |
ldrD-rdlD/- |
| TA006328 |
- |
Escherichia coli str. K-12 substr. MC4100 (chromosome) |
HG738867 |
BN896_3227 (ldrD) |
BN896_4257 (rdlD) |
ldrD-rdlD/- |
| TA006338 |
- |
Escherichia coli str. K-12 substr. MDS42 (chromosome) |
NC_020518 |
ECMDS42_1005 (ldrD) |
ECMDS42_1006 (rdlD) |
ldrD-rdlD/- |
| TA006339 |
- |
Escherichia coli str. K-12 substr. MDS42 (chromosome) |
NC_020518 |
ECMDS42_1007 (ldrD) |
ECMDS42_1008 (rdlD) |
ldrD-rdlD/- |
| TA006340 |
- |
Escherichia coli str. K-12 substr. MDS42 (chromosome) |
NC_020518 |
ECMDS42_2974 (ldrD) |
ECMDS42_2975 (rdlD) |
ldrD-rdlD/- |
| TA006337 |
- |
Escherichia coli str. K-12 substr. MDS42 (chromosome) |
NC_020518 |
ECMDS42_1003 (ldrD) |
ECMDS42_1004 (rdlD) |
ldrD-rdlD/- |
TA006364
Link to T1TAdb |
IS/Tn |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4613 (dinQ) |
(agrB) |
dinQ-agrB/- |
TA010087
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4812 (timP) |
- (timR) |
timP-timR/- |
TA006350
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4618 (tisB) |
b4616 (istR) |
tisB-istR/- |
TA006332
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4453 (ldrD) |
b4454 (rdlD) |
ldrD-rdlD/- |
TA006331
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4423 (ldrD) |
b4424 (rdlD) |
ldrD-rdlD/- |
TA006352
Link to T1TAdb |
GI |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4347 (symE) |
b4625 (symR) |
symER/- |
TA006353
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4667 (ibs) |
b4436 (sib) |
ibs-sib/- |
TA006354
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4668 (ibs) |
b4437 (sib) |
ibs-sib/- |
TA006355
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4665 (ibs) |
b4446 (sib) |
ibs-sib/- |
TA006356
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4664 (ibs) |
b4447 (sib) |
ibs-sib/- |
TA006357
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4666 (ibs) |
b4611 (sib) |
ibs-sib/- |
TA006358
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4687 (shoB) |
b4608 (ohsC) |
shoB-ohsC/- |
TA006330
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4421 (ldrD) |
b4422 (rdlD) |
ldrD-rdlD/- |
TA006362
Link to T1TAdb |
Prophage |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b1348 (ralR) |
b4714 (ralA) |
ralRA/- |
TA006329
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. MG1655 (chromosome) |
NC_000913 |
b4419 (ldrD) |
b4420 (rdlD) |
ldrD-rdlD/- |
TA006343
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. W3110 (chromosome) |
NC_007779 |
Y75_p1190 (ldrD) |
Y75_s0010 (rdlD) |
ldrD-rdlD/- |
TA010212
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. W3110 (chromosome) |
NC_007779 |
Y75_RS13405 (shoB) |
- (ohsC) |
shoB-ohsC/- |
TA006344
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. W3110 (chromosome) |
NC_007779 |
Y75_p3638 (ldrD) |
Y75_s0046 (rdlD) |
ldrD-rdlD/- |
TA006342
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. W3110 (chromosome) |
NC_007779 |
Y75_p1189 (ldrD) |
Y75_s0009 (rdlD) |
ldrD-rdlD/- |
TA006341
Link to T1TAdb |
- |
Escherichia coli str. K-12 substr. W3110 (chromosome) |
NC_007779 |
Y75_p1188 (ldrD) |
Y75_s0008 (rdlD) |
ldrD-rdlD/- |
TA010210
Link to T1TAdb |
- |
Hafnia alvei (chromosome) |
X03774 |
- (hokH) |
- (sokH) |
hok-sok/- |
TA010214
Link to T1TAdb |
- |
Helicobacter pylori 26695 (chromosome) |
NC_000915 |
- (AapC) |
- (IsoC) |
AapC-IsoC/- |
TA010113
Link to T1TAdb |
- |
Helicobacter pylori 26695 (chromosome) |
NC_000915 |
- (AapA3) |
- (IsoA3) |
aapA-IsoA/- |
TA010085
Link to T1TAdb |
- |
Helicobacter pylori 26695 (chromosome) |
NC_000915 |
- (AapA1) |
- (IsoA1) |
aapA-IsoA/- |
TA010217
Link to T1TAdb |
- |
Helicobacter pylori 26695 (chromosome) |
NC_000915 |
- (AapB) |
- (IsoB) |
AapB-IsoB/- |
TA010216
Link to T1TAdb |
- |
Helicobacter pylori 26695 (chromosome) |
NC_000915 |
- (AapD) |
- (IsoD) |
AapD-IsoD/- |
TA010215
Link to T1TAdb |
ICE |
Helicobacter pylori 26695 (chromosome) |
NC_000915 |
- (AapC) |
- (IsoC) |
AapC-IsoC/- |
TA010086
Link to T1TAdb |
- |
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 |
NC_016810 |
SL1344_RS27845 (timP) |
- (timR) |
timP-timR/- |
| TA010103 |
GI IS/Tn |
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 |
NC_016810 |
- (IasE) |
- (IsrA) |
IasE-IsrA/- |
| TA010147 |
- |
Staphylococcus aureus strain HG003 isolate RN1 Scaffold_3 (chromosome) |
NZ_JPPU01000003 |
- (SprG3) |
- (SprF3) |
sprG-sprF/- |
| TA010146 |
Prophage |
Staphylococcus aureus strain HG003 isolate RN1 Scaffold_5 (chromosome) |
NZ_JPPU01000005 |
- (SprG1) |
- (SprF1) |
sprG-sprF/- |
| TA010049 |
- |
Staphylococcus aureus strain HG003 isolate RN1 Scaffold_9 (chromosome) |
NZ_JPPU01000009 |
- (SprG2) |
- (SprF2) |
sprG-sprF/- |
| TA010148 |
- |
Staphylococcus aureus strain HG003 isolate RN1 Scaffold_9 (chromosome) |
NZ_JPPU01000009 |
- (SprG4) |
- (SprF4) |
sprG-sprF/- |
| TA010154 |
Prophage |
Staphylococcus aureus subsp. aureus MW2 (chromosome) |
NC_003923 |
MW_RS14845 (txpA) |
- |
higBA (relBE)/- |
| TA010155 |
- |
Staphylococcus aureus subsp. aureus MW2 (chromosome) |
NC_003923 |
- (fst) |
- |
higBA (relBE)/- |
| TA010156 |
Prophage |
Staphylococcus aureus subsp. aureus MW2 (chromosome) |
NC_003923 |
MW_RS07425 (holin) |
- |
higBA (relBE)/- |
| TA010107 |
Prophage |
Staphylococcus aureus subsp. aureus MW2 (chromosome) |
NC_003923 |
MW_RS07680 (MW1434) |
MW_RS07675 (MW1433) |
TMCS/- |
TA010025
Link to T1TAdb |
- |
Staphylococcus aureus subsp. aureus N315 (chromosome) |
NC_002745 |
SprG2 (SprG) |
(SprF) |
sprG-sprF/- |
TA010026
Link to T1TAdb |
- |
Staphylococcus aureus subsp. aureus N315 (chromosome) |
NC_002745 |
SprG3 (SprG) |
(SprF) |
sprG-sprF/- |
TA010027
Link to T1TAdb |
- |
Staphylococcus aureus subsp. aureus N315 (chromosome) |
NC_002745 |
SprG4 (SprG) |
(SprF) |
sprG-sprF/- |
TA006360
Link to T1TAdb |
Prophage |
Staphylococcus aureus subsp. aureus N315 (chromosome) |
NC_002745 |
SAS059 (SprG) |
SprF (SprF) |
sprG-sprF/- |
TA010149
Link to T1TAdb |
- |
Staphylococcus aureus subsp. aureus str. Newman (chromosome) |
NC_009641 |
- (SprA2) |
- (SprA2AS) |
SprA2-SprA2AS/- |
TA010024
Link to T1TAdb |
Prophage |
Staphylococcus aureus subsp. aureus str. Newman (chromosome) |
NC_009641 |
NWMN_RS15745 (sprA1) |
(sprA1AS) |
sprA1-sprA1AS/- |
| TA006363 |
Plasmid |
uncultured bacterium (plasmid pRSB225) |
NC_025100 |
pRSB225_34 (hok) |
pRSB225_32 (sok) |
hok-sok/- |