MGE detailed information
MGE type: Prophage MGE length: 52962 bp
Accession: NC_009089 Location: 3375898..3428859 Organism: Clostridium difficile 630 Replicon: chromosome
Accession: NC_009089 Location: 3375898..3428859 Organism: Clostridium difficile 630 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Location: 3375865..3377019 (1155 bp)
Type: Others
Protein ID: WP_003439713.1
Type: Others
Protein ID: WP_003439713.1
Location: 3380679..3380867 (189 bp)
Type: Others
Protein ID: WP_009898401.1
Type: Others
Protein ID: WP_009898401.1
Location: 3398302..3398435 (134 bp)
Type: Antitoxin
Protein ID: -
Type: Antitoxin
Protein ID: -
Location: 3410441..3410758 (318 bp)
Type: Others
Protein ID: WP_009894743.1
Type: Others
Protein ID: WP_009894743.1
Location: 3426490..3426945 (456 bp)
Type: Others
Protein ID: WP_011861758.1
Type: Others
Protein ID: WP_011861758.1
Location: 3426963..3427436 (474 bp)
Type: Others
Protein ID: WP_011861759.1
Type: Others
Protein ID: WP_011861759.1
Location: 3427501..3428859 (1359 bp)
Type: Transposase
Protein ID: WP_011861760.1
Type: Transposase
Protein ID: WP_011861760.1
Location: 3371364..3372677 (1314 bp)
Type: Others
Protein ID: WP_003439696.1
Type: Others
Protein ID: WP_003439696.1
Location: 3372699..3373010 (312 bp)
Type: Others
Protein ID: WP_003422688.1
Type: Others
Protein ID: WP_003422688.1
Location: 3373210..3373914 (705 bp)
Type: Others
Protein ID: WP_003426754.1
Type: Others
Protein ID: WP_003426754.1
Location: 3374005..3375366 (1362 bp)
Type: Others
Protein ID: WP_011861729.1
Type: Others
Protein ID: WP_011861729.1
Location: 3377100..3378818 (1719 bp)
Type: Others
Protein ID: WP_011861730.1
Type: Others
Protein ID: WP_011861730.1
Location: 3378823..3379704 (882 bp)
Type: VF
Protein ID: Protein_2998
Type: VF
Protein ID: Protein_2998
Location: 3380278..3380421 (144 bp)
Type: Toxin
Protein ID: WP_011861731.1
Type: Toxin
Protein ID: WP_011861731.1
Location: 3381114..3381818 (705 bp)
Type: Others
Protein ID: WP_011861732.1
Type: Others
Protein ID: WP_011861732.1
Location: 3381820..3382251 (432 bp)
Type: Others
Protein ID: WP_011861052.1
Type: Others
Protein ID: WP_011861052.1
Location: 3382269..3382832 (564 bp)
Type: Others
Protein ID: WP_021371073.1
Type: Others
Protein ID: WP_021371073.1
Location: 3383378..3383674 (297 bp)
Type: Others
Protein ID: WP_011861049.1
Type: Others
Protein ID: WP_011861049.1
Location: 3383691..3384506 (816 bp)
Type: Others
Protein ID: WP_011861048.1
Type: Others
Protein ID: WP_011861048.1
Location: 3384503..3384763 (261 bp)
Type: Others
Protein ID: WP_011861047.1
Type: Others
Protein ID: WP_011861047.1
Location: 3384783..3385013 (231 bp)
Type: Others
Protein ID: WP_011861046.1
Type: Others
Protein ID: WP_011861046.1
Location: 3385048..3385230 (183 bp)
Type: Others
Protein ID: WP_011861045.1
Type: Others
Protein ID: WP_011861045.1
Location: 3385230..3385523 (294 bp)
Type: Others
Protein ID: WP_011861044.1
Type: Others
Protein ID: WP_011861044.1
Location: 3385540..3387237 (1698 bp)
Type: Others
Protein ID: WP_021413561.1
Type: Others
Protein ID: WP_021413561.1
Location: 3387255..3388058 (804 bp)
Type: Others
Protein ID: WP_011861042.1
Type: Others
Protein ID: WP_011861042.1
Location: 3388070..3388687 (618 bp)
Type: Others
Protein ID: WP_011861041.1
Type: Others
Protein ID: WP_011861041.1
Location: 3388680..3389729 (1050 bp)
Type: Others
Protein ID: WP_011861040.1
Type: Others
Protein ID: WP_011861040.1
Location: 3389730..3390149 (420 bp)
Type: Others
Protein ID: WP_011861039.1
Type: Others
Protein ID: WP_011861039.1
Location: 3390154..3390414 (261 bp)
Type: Others
Protein ID: WP_009901352.1
Type: Others
Protein ID: WP_009901352.1
Location: 3390428..3392398 (1971 bp)
Type: VF
Protein ID: WP_011861038.1
Type: VF
Protein ID: WP_011861038.1
Location: 3392391..3393080 (690 bp)
Type: Others
Protein ID: WP_011861037.1
Type: Others
Protein ID: WP_011861037.1
Location: 3393096..3395447 (2352 bp)
Type: Others
Protein ID: WP_011861036.1
Type: Others
Protein ID: WP_011861036.1
Location: 3395518..3396087 (570 bp)
Type: Others
Protein ID: WP_011861035.1
Type: Others
Protein ID: WP_011861035.1
Location: 3396131..3396691 (561 bp)
Type: Others
Protein ID: WP_011861034.1
Type: Others
Protein ID: WP_011861034.1
Location: 3398355..3398516 (162 bp)
Type: Toxin
Protein ID: WP_003429855.1
Type: Toxin
Protein ID: WP_003429855.1
Location: 3398857..3399297 (441 bp)
Type: Others
Protein ID: WP_003429853.1
Type: Others
Protein ID: WP_003429853.1
Location: 3399369..3399839 (471 bp)
Type: Others
Protein ID: WP_003429851.1
Type: Others
Protein ID: WP_003429851.1
Location: 3399856..3401166 (1311 bp)
Type: Others
Protein ID: WP_011861032.1
Type: Others
Protein ID: WP_011861032.1
Location: 3401168..3401344 (177 bp)
Type: Others
Protein ID: WP_011861031.1
Type: Others
Protein ID: WP_011861031.1
Location: 3401337..3401774 (438 bp)
Type: Others
Protein ID: WP_009901504.1
Type: Others
Protein ID: WP_009901504.1
Location: 3401767..3402192 (426 bp)
Type: Others
Protein ID: WP_011861030.1
Type: Others
Protein ID: WP_011861030.1
Location: 3402192..3402539 (348 bp)
Type: Others
Protein ID: WP_003429844.1
Type: Others
Protein ID: WP_003429844.1
Location: 3402533..3402934 (402 bp)
Type: Others
Protein ID: WP_009888836.1
Type: Others
Protein ID: WP_009888836.1
Location: 3402944..3403177 (234 bp)
Type: Others
Protein ID: WP_009896624.1
Type: Others
Protein ID: WP_009896624.1
Location: 3403177..3404076 (900 bp)
Type: Others
Protein ID: WP_011861029.1
Type: Others
Protein ID: WP_011861029.1
Location: 3404088..3404651 (564 bp)
Type: Others
Protein ID: WP_011861028.1
Type: Others
Protein ID: WP_011861028.1
Location: 3404961..3405203 (243 bp)
Type: Others
Protein ID: WP_009901430.1
Type: Others
Protein ID: WP_009901430.1
Location: 3405169..3406662 (1494 bp)
Type: Others
Protein ID: WP_003429838.1
Type: Others
Protein ID: WP_003429838.1
Location: 3406652..3408091 (1440 bp)
Type: Others
Protein ID: WP_011861027.1
Type: Others
Protein ID: WP_011861027.1
Location: 3408097..3409350 (1254 bp)
Type: Others
Protein ID: WP_003433530.1
Type: Others
Protein ID: WP_003433530.1
Location: 3409328..3410020 (693 bp)
Type: Others
Protein ID: WP_011861025.1
Type: Others
Protein ID: WP_011861025.1
Location: 3410090..3410317 (228 bp)
Type: Others
Protein ID: WP_009894744.1
Type: Others
Protein ID: WP_009894744.1
Location: 3410738..3410926 (189 bp)
Type: Others
Protein ID: WP_009894742.1
Type: Others
Protein ID: WP_009894742.1
Location: 3411003..3411614 (612 bp)
Type: Others
Protein ID: WP_009894741.1
Type: Others
Protein ID: WP_009894741.1
Location: 3411614..3411787 (174 bp)
Type: Others
Protein ID: WP_009894739.1
Type: Others
Protein ID: WP_009894739.1
Location: 3412606..3413769 (1164 bp)
Type: Others
Protein ID: WP_032506905.1
Type: Others
Protein ID: WP_032506905.1
Location: 3413788..3414543 (756 bp)
Type: Others
Protein ID: WP_011861735.1
Type: Others
Protein ID: WP_011861735.1
Location: 3414864..3415352 (489 bp)
Type: Others
Protein ID: WP_011861022.1
Type: Others
Protein ID: WP_011861022.1
Location: 3415446..3416186 (741 bp)
Type: Others
Protein ID: WP_011861736.1
Type: Others
Protein ID: WP_011861736.1
Location: 3416249..3416656 (408 bp)
Type: Others
Protein ID: WP_011861737.1
Type: Others
Protein ID: WP_011861737.1
Location: 3416646..3417044 (399 bp)
Type: Others
Protein ID: WP_011861738.1
Type: Others
Protein ID: WP_011861738.1
Location: 3417187..3417513 (327 bp)
Type: Others
Protein ID: WP_011861739.1
Type: Others
Protein ID: WP_011861739.1
Location: 3417584..3417955 (372 bp)
Type: Others
Protein ID: WP_011861740.1
Type: Others
Protein ID: WP_011861740.1
Location: 3417948..3418121 (174 bp)
Type: Others
Protein ID: WP_011861741.1
Type: Others
Protein ID: WP_011861741.1
Location: 3418130..3418513 (384 bp)
Type: Others
Protein ID: WP_011861742.1
Type: Others
Protein ID: WP_011861742.1
Location: 3418525..3419520 (996 bp)
Type: Others
Protein ID: WP_011861743.1
Type: Others
Protein ID: WP_011861743.1
Location: 3419615..3419890 (276 bp)
Type: Others
Protein ID: WP_011861744.1
Type: Others
Protein ID: WP_011861744.1
Location: 3419942..3420100 (159 bp)
Type: Others
Protein ID: WP_018112752.1
Type: Others
Protein ID: WP_018112752.1
Location: 3420219..3420392 (174 bp)
Type: Others
Protein ID: WP_021359693.1
Type: Others
Protein ID: WP_021359693.1
Location: 3420389..3420529 (141 bp)
Type: Others
Protein ID: WP_021359694.1
Type: Others
Protein ID: WP_021359694.1
Location: 3420498..3420878 (381 bp)
Type: Others
Protein ID: WP_011861745.1
Type: Others
Protein ID: WP_011861745.1
Location: 3420882..3421247 (366 bp)
Type: Others
Protein ID: WP_021398171.1
Type: Others
Protein ID: WP_021398171.1
Location: 3421244..3421507 (264 bp)
Type: Others
Protein ID: WP_011861747.1
Type: Others
Protein ID: WP_011861747.1
Location: 3421581..3421997 (417 bp)
Type: Others
Protein ID: WP_011861748.1
Type: Others
Protein ID: WP_011861748.1
Location: 3422013..3422186 (174 bp)
Type: Others
Protein ID: WP_011861749.1
Type: Others
Protein ID: WP_011861749.1
Location: 3422246..3423196 (951 bp)
Type: Others
Protein ID: WP_011861750.1
Type: Others
Protein ID: WP_011861750.1
Location: 3423205..3423795 (591 bp)
Type: Others
Protein ID: WP_011861751.1
Type: Others
Protein ID: WP_011861751.1
Location: 3423805..3424314 (510 bp)
Type: Others
Protein ID: WP_011861752.1
Type: Others
Protein ID: WP_011861752.1
Location: 3424400..3424717 (318 bp)
Type: Others
Protein ID: WP_011861753.1
Type: Others
Protein ID: WP_011861753.1
Location: 3424817..3425044 (228 bp)
Type: Others
Protein ID: WP_021391119.1
Type: Others
Protein ID: WP_021391119.1
Location: 3425019..3425207 (189 bp)
Type: Others
Protein ID: WP_011861755.1
Type: Others
Protein ID: WP_011861755.1
Location: 3425273..3426067 (795 bp)
Type: Others
Protein ID: WP_011861756.1
Type: Others
Protein ID: WP_011861756.1
Location: 3426115..3426336 (222 bp)
Type: Others
Protein ID: WP_011861757.1
Type: Others
Protein ID: WP_011861757.1
Location: 3428882..3428998 (117 bp)
Type: Others
Protein ID: Protein_3074
Type: Others
Protein ID: Protein_3074
Location: 3429094..3430143 (1050 bp)
Type: Others
Protein ID: WP_011861761.1
Type: Others
Protein ID: WP_011861761.1
Location: 3430420..3431088 (669 bp)
Type: Others
Protein ID: WP_009891221.1
Type: Others
Protein ID: WP_009891221.1
Location: 3431094..3432467 (1374 bp)
Type: Others
Protein ID: WP_003422669.1
Type: Others
Protein ID: WP_003422669.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CD630_RS15385 (CD630_28830) | 3371364..3372677 | - | 1314 | WP_003439696.1 | PTS sugar transporter subunit IIC | - |
| CD630_RS15390 (CD630_28840) | 3372699..3373010 | - | 312 | WP_003422688.1 | PTS sugar transporter subunit IIB | - |
| CD630_RS15395 (CD630_28850) | 3373210..3373914 | - | 705 | WP_003426754.1 | GntR family transcriptional regulator | - |
| CD630_RS15400 (CD630_28860) | 3374005..3375366 | - | 1362 | WP_011861729.1 | MATE family efflux transporter | - |
| CD630_RS15405 (CD630_28870) | 3375865..3377019 | + | 1155 | WP_003439713.1 | GGDEF domain-containing protein | - |
| CD630_RS15410 (CD630_28880) | 3377100..3378818 | - | 1719 | WP_011861730.1 | putative 2-aminoethylphosphonate ABC transporter permease subunit | - |
| CD630_RS15415 | 3378823..3379704 | - | 882 | Protein_2998 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CD630_RS19835 (CD630_28890) | 3380278..3380421 | - | 144 | WP_011861731.1 | hypothetical protein | Toxin Detail |
| CD630_RS15420 | 3380679..3380867 | + | 189 | WP_009898401.1 | hypothetical protein | - |
| CD630_RS15425 (CD630_28900) | 3381114..3381818 | - | 705 | WP_011861732.1 | hypothetical protein | - |
| CD630_RS15430 (CD630_28910) | 3381820..3382251 | - | 432 | WP_011861052.1 | protein-export chaperone SecB | - |
| CD630_RS15435 (CD630_28920) | 3382269..3382832 | - | 564 | WP_021371073.1 | hypothetical protein | - |
| CD630_RS15440 (CD630_28930) | 3383378..3383674 | - | 297 | WP_011861049.1 | hypothetical protein | - |
| CD630_RS15445 (CD630_28940) | 3383691..3384506 | - | 816 | WP_011861048.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CD630_RS15450 (CD630_28941) | 3384503..3384763 | - | 261 | WP_011861047.1 | phage holin family protein | - |
| CD630_RS15455 (CD630_28950) | 3384783..3385013 | - | 231 | WP_011861046.1 | hemolysin XhlA family protein | - |
| CD630_RS15460 | 3385048..3385230 | - | 183 | WP_011861045.1 | hypothetical protein | - |
| CD630_RS15465 (CD630_28960) | 3385230..3385523 | - | 294 | WP_011861044.1 | hypothetical protein | - |
| CD630_RS15470 (CD630_28970) | 3385540..3387237 | - | 1698 | WP_021413561.1 | glycine rich family protein | - |
| CD630_RS15475 (CD630_28980) | 3387255..3388058 | - | 804 | WP_011861042.1 | phage tail protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
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Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Clostridioides difficile 630 | Prophage | TA53093, TA53097 | NZ_CP010905 | 3360426..3413387 | 0 | |
| Clostridioides difficile strain 630 delta erm | Prophage | TA64419 | NZ_CP016318 | 3337899..3386079 | 0.002 | |
| Clostridioides difficile strain 630Derm | Prophage | TA285478 | NZ_LN614756 | 3337900..3386080 | 0.002 |