MGE detailed information
MGE type: Prophage MGE length: 39143 bp
Accession: NZ_JPPU01000005 Location: 180..39322 Organism: Staphylococcus aureus strain HG003 isolate RN1 Scaffold_5 Replicon: chromosome
Accession: NZ_JPPU01000005 Location: 180..39322 Organism: Staphylococcus aureus strain HG003 isolate RN1 Scaffold_5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IM26_RS18325 (IM26_03205) | 180..950 | - | 771 | WP_001208482.1 | S24 family peptidase | - |
| IM26_RS18330 (IM26_03210) | 1109..1333 | + | 225 | WP_000338186.1 | DUF739 family protein | - |
| IM26_RS18335 (IM26_03215) | 1351..1611 | + | 261 | WP_000435341.1 | transcriptional regulator | - |
| IM26_RS18340 (IM26_03220) | 1635..2174 | - | 540 | WP_000351241.1 | hypothetical protein | - |
| IM26_RS29045 (IM26_03225) | 2231..2980 | + | 750 | Protein_4 | phage antirepressor KilAC domain-containing protein | - |
| IM26_RS18345 (IM26_03230) | 2996..3193 | + | 198 | WP_001148855.1 | hypothetical protein | - |
| IM26_RS0113910 | 3224..3364 | + | 141 | WP_000939496.1 | hypothetical protein | - |
| IM26_RS18350 (IM26_03240) | 3379..4011 | - | 633 | WP_000275058.1 | hypothetical protein | - |
| IM26_RS18355 (IM26_03245) | 4070..4390 | + | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| IM26_RS0113915 | 4387..4548 | + | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| IM26_RS18360 (IM26_03255) | 4641..4901 | + | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| IM26_RS18365 (IM26_03260) | 4911..5132 | + | 222 | WP_000815404.1 | DUF2483 domain-containing protein | - |
| IM26_RS18370 (IM26_03265) | 5125..5904 | + | 780 | WP_000137070.1 | ATP-binding protein | - |
| IM26_RS18375 (IM26_03270) | 5935..6486 | + | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| IM26_RS18380 (IM26_03275) | 6499..7170 | + | 672 | WP_001199416.1 | putative HNHc nuclease | - |
| IM26_RS29160 | 7167..7316 | + | 150 | WP_001081076.1 | hypothetical protein | - |
| IM26_RS18385 (IM26_03285) | 7309..7590 | - | 282 | WP_000414755.1 | hypothetical protein | - |
| IM26_RS18390 (IM26_03290) | 7656..8426 | + | 771 | WP_000190253.1 | conserved phage C-terminal domain-containing protein | - |
| IM26_RS18395 (IM26_03295) | 8436..9215 | + | 780 | WP_000803062.1 | ATP-binding protein | - |
| IM26_RS0113925 | 9209..9367 | + | 159 | WP_000256590.1 | hypothetical protein | - |
| IM26_RS18400 (IM26_03305) | 9380..9601 | + | 222 | WP_001123685.1 | DUF3269 family protein | - |
| IM26_RS18405 (IM26_03310) | 9612..10016 | + | 405 | WP_000049810.1 | DUF1064 domain-containing protein | - |
| IM26_RS18410 (IM26_03315) | 10021..10206 | + | 186 | WP_001187234.1 | DUF3113 family protein | - |
| IM26_RS18415 (IM26_03320) | 10207..10578 | + | 372 | WP_001029545.1 | SA1788 family PVL leukocidin-associated protein | - |
| IM26_RS18420 (IM26_03325) | 10579..10827 | + | 249 | WP_001126839.1 | phi PVL orf 51-like protein | - |
| IM26_RS18425 (IM26_03330) | 10891..11238 | + | 348 | WP_000982695.1 | YopX family protein | - |
| IM26_RS18430 (IM26_03335) | 11235..11624 | + | 390 | WP_000219085.1 | acetyltransferase | - |
| IM26_RS18435 (IM26_03340) | 11617..11871 | + | 255 | WP_001065078.1 | DUF1024 family protein | - |
| IM26_RS0113930 | 11858..12028 | + | 171 | WP_000714407.1 | hypothetical protein | - |
| IM26_RS18440 (IM26_03350) | 12021..12557 | + | 537 | WP_001066448.1 | dUTP diphosphatase | - |
| IM26_RS0113935 | 12594..12767 | + | 174 | WP_001209216.1 | hypothetical protein | - |
| IM26_RS18445 (IM26_03360) | 12784..12990 | + | 207 | WP_000195759.1 | DUF1381 domain-containing protein | - |
| IM26_RS18450 (IM26_03365) | 12987..13136 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| IM26_RS18455 (IM26_03370) | 13136..13336 | + | 201 | WP_001794311.1 | DUF1514 family protein | - |
| IM26_RS18465 (IM26_03375) | 13359..13829 | + | 471 | WP_000282748.1 | hypothetical protein | - |
| IM26_RS18470 (IM26_03380) | 13944..14396 | + | 453 | WP_000406195.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| IM26_RS18475 (IM26_03385) | 14412..14756 | + | 345 | WP_000817289.1 | HNH endonuclease | - |
| IM26_RS18480 (IM26_03390) | 14886..15353 | + | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| IM26_RS18485 (IM26_03395) | 15356..17050 | + | 1695 | WP_000133304.1 | phage terminase family protein | - |
| IM26_RS18490 (IM26_03400) | 17064..17264 | + | 201 | WP_000365300.1 | hypothetical protein | - |
| IM26_RS18495 (IM26_03405) | 17270..18520 | + | 1251 | WP_000511067.1 | phage portal protein | - |
| IM26_RS18500 (IM26_03410) | 18513..19097 | + | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| IM26_RS18505 (IM26_03415) | 19185..20432 | + | 1248 | WP_000849951.1 | phage major capsid protein | - |
| IM26_RS0113940 | 20468..20626 | + | 159 | WP_001252099.1 | hypothetical protein | - |
| IM26_RS18510 (IM26_03425) | 20635..20967 | + | 333 | WP_001177487.1 | head-tail connector protein | - |
| IM26_RS18515 (IM26_03430) | 20954..21289 | + | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| IM26_RS18520 (IM26_03435) | 21289..21666 | + | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| IM26_RS18525 (IM26_03440) | 21663..22043 | + | 381 | WP_000611452.1 | hypothetical protein | - |
| IM26_RS18530 (IM26_03445) | 22044..22997 | + | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| IM26_RS18535 (IM26_03450) | 23062..23508 | + | 447 | WP_000442601.1 | hypothetical protein | - |
| IM26_RS0113945 | 23568..23690 | + | 123 | WP_000570353.1 | hypothetical protein | - |
| IM26_RS18540 (IM26_03455) | 23746..28398 | + | 4653 | WP_001133528.1 | phage tail tape measure protein | - |
| IM26_RS18545 (IM26_03460) | 28398..29888 | + | 1491 | WP_001154327.1 | phage tail family protein | - |
| IM26_RS18550 (IM26_03465) | 29904..33689 | + | 3786 | WP_000582137.1 | phage tail spike protein | - |
| IM26_RS0113950 | 33679..33831 | + | 153 | WP_001153681.1 | hypothetical protein | - |
| IM26_RS18555 (IM26_03475) | 33878..34165 | + | 288 | WP_001040261.1 | hypothetical protein | - |
| IM26_RS0113955 (IM26_03480) | 34223..34519 | + | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| - | 34711..34842 | + | 132 | - | - | Toxin Detail |
| - | 34833..35007 | - | 175 | - | - | Antitoxin Detail |
| IM26_RS18560 (IM26_03490) | 35057..35311 | + | 255 | WP_000611512.1 | phage holin | - |
| IM26_RS18565 (IM26_03495) | 35323..36078 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| IM26_RS18570 (IM26_03500) | 36269..36760 | + | 492 | WP_000920037.1 | Staphylokinase | VF |
| IM26_RS29050 (IM26_03505) | 37410..37745 | + | 336 | Protein_62 | SH3 domain-containing protein | - |
| IM26_RS18580 (IM26_03510) | 37840..38289 | - | 450 | WP_000727643.1 | Chemotaxis inhibitory protein | VF |
| IM26_RS18585 (IM26_03515) | 38972..39322 | + | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| IM26_RS0113965 | 39375..39635 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| IM26_RS0113975 | 39946..40125 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| IM26_RS18590 (IM26_03520) | 40497..40694 | - | 198 | WP_000239610.1 | phospholipase | - |
| IM26_RS18595 (IM26_03525) | 41083..43138 | + | 2056 | Protein_68 | extracellular adherence protein Eap/Map | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus NCTC 8325 | Prophage | TA21487 | NC_007795 | 2033113..2088736 | 0.009 | |
| Staphylococcus aureus subsp. aureus NCTC 8325 | Prophage | TA21487 | NC_007795 | 2033113..2088736 | 0.009 | |
| Staphylococcus aureus strain JP02758 | Prophage | TA31424, TA31426 | NZ_AP017922 | 1431246..1475518 | 0.004 | |
| Staphylococcus aureus strain 502A isolate RN6607 | Prophage | TA46477 | NZ_CP007454 | 1846270..1892621 | 0.004 | |
| Staphylococcus aureus strain HG001 isolate RN1 | Prophage | TA68904 | NZ_CP018205 | 2031909..2087532 | 0.009 | |
| Staphylococcus aureus strain FDAARGOS_14 | Prophage | TA92974, TA92975 | NZ_CP026063 | 88710..139328 | 0.007 | |
| Staphylococcus aureus strain FDAARGOS_10 | Prophage | TA96846 | NZ_CP026961 | 93666..149289 | 0.009 | |
| Staphylococcus aureus strain NCTC8317 | Prophage | TA286509, TA286510 | NZ_LR133917 | 1975027..2027773 | 0.008 | |
| Staphylococcus aureus subsp. aureus NCTC 8325 | Prophage | TA292434 | NZ_LS483365 | 2041737..2097360 | 0.009 |