MGE detailed information

MGE type: Prophage        MGE length: 65636 bp
Accession: NC_009089        Location: 1078053..1143688         Organism: Clostridium difficile 630       Replicon: chromosome

Gene structure

Location: 1074642..1076132 (1491 bp)
Type: Others
Protein ID: WP_009888725.1

Location: 1076412..1077908 (1497 bp)
Type: Others
Protein ID: WP_009895925.1

Location: 1078053..1078967 (915 bp)
Type: VF
Protein ID: WP_011860980.1

Location: 1079085..1079276 (192 bp)
Type: Others
Protein ID: WP_003418667.1

Location: 1079499..1079849 (351 bp)
Type: Others
Protein ID: WP_003437137.1

Location: 1080111..1081616 (1506 bp)
Type: Others
Protein ID: WP_003437136.1

Location: 1082006..1083103 (1098 bp)
Type: Others
Protein ID: WP_011860981.1

Location: 1083366..1084502 (1137 bp)
Type: VF
Protein ID: WP_003437132.1

Location: 1084495..1086042 (1548 bp)
Type: Others
Protein ID: WP_021361803.1

Location: 1086376..1087242 (867 bp)
Type: Others
Protein ID: WP_003437125.1

Location: 1087383..1088021 (639 bp)
Type: Others
Protein ID: Protein_924

Location: 1094326..1094514 (189 bp)
Type: Others
Protein ID: WP_011860987.1

Location: 1094548..1095342 (795 bp)
Type: Others
Protein ID: WP_011860988.1

Location: 1095404..1095604 (201 bp)
Type: Others
Protein ID: WP_011860989.1

Location: 1096282..1096479 (198 bp)
Type: Others
Protein ID: WP_011860991.1

Location: 1096496..1096825 (330 bp)
Type: Others
Protein ID: WP_011860992.1

Location: 1096927..1097115 (189 bp)
Type: Others
Protein ID: WP_011860993.1

Location: 1097131..1097343 (213 bp)
Type: Others
Protein ID: WP_022583264.1

Location: 1097442..1097684 (243 bp)
Type: Others
Protein ID: WP_011860995.1

Location: 1097768..1098283 (516 bp)
Type: Others
Protein ID: WP_011860996.1

Location: 1098285..1099187 (903 bp)
Type: Others
Protein ID: WP_011860997.1

Location: 1099200..1100039 (840 bp)
Type: Others
Protein ID: WP_011860998.1

Location: 1100110..1100364 (255 bp)
Type: Others
Protein ID: WP_011860999.1

Location: 1100438..1100701 (264 bp)
Type: Others
Protein ID: WP_011861000.1

Location: 1100713..1101063 (351 bp)
Type: Others
Protein ID: WP_011861001.1

Location: 1101067..1101447 (381 bp)
Type: Others
Protein ID: WP_011861002.1

Location: 1101416..1101577 (162 bp)
Type: Others
Protein ID: WP_021362052.1

Location: 1101552..1101710 (159 bp)
Type: Others
Protein ID: WP_011861004.1

Location: 1101707..1101880 (174 bp)
Type: Others
Protein ID: WP_011861005.1

Location: 1101998..1102333 (336 bp)
Type: Others
Protein ID: WP_011861007.1

Location: 1102433..1102708 (276 bp)
Type: Others
Protein ID: WP_011861008.1

Location: 1102804..1103877 (1074 bp)
Type: Others
Protein ID: WP_011861009.1

Location: 1103957..1104166 (210 bp)
Type: Others
Protein ID: WP_011861010.1

Location: 1104178..1105173 (996 bp)
Type: Others
Protein ID: WP_011861011.1

Location: 1105182..1105907 (726 bp)
Type: Others
Protein ID: WP_011861012.1

Location: 1105904..1106077 (174 bp)
Type: Others
Protein ID: WP_011861013.1

Location: 1106070..1106441 (372 bp)
Type: Others
Protein ID: WP_011861014.1

Location: 1106444..1106911 (468 bp)
Type: Others
Protein ID: WP_011861015.1

Location: 1106990..1107175 (186 bp)
Type: Others
Protein ID: WP_011861016.1

Location: 1107189..1107428 (240 bp)
Type: Others
Protein ID: WP_015981545.1

Location: 1107557..1108363 (807 bp)
Type: Others
Protein ID: WP_011861019.1

Location: 1108377..1108784 (408 bp)
Type: Others
Protein ID: WP_011861020.1

Location: 1108799..1109524 (726 bp)
Type: Others
Protein ID: WP_011861021.1

Location: 1109618..1110106 (489 bp)
Type: Others
Protein ID: WP_011861022.1

Location: 1110854..1111027 (174 bp)
Type: Others
Protein ID: WP_009894739.1

Location: 1111027..1111638 (612 bp)
Type: Others
Protein ID: WP_009894741.1

Location: 1111715..1111903 (189 bp)
Type: Others
Protein ID: WP_009894742.1

Location: 1112324..1112551 (228 bp)
Type: Others
Protein ID: WP_009894744.1

Location: 1112621..1113313 (693 bp)
Type: Others
Protein ID: WP_011861025.1

Location: 1113291..1114544 (1254 bp)
Type: Others
Protein ID: WP_003433530.1

Location: 1114550..1115989 (1440 bp)
Type: Others
Protein ID: WP_011861027.1

Location: 1115979..1117472 (1494 bp)
Type: Others
Protein ID: WP_003429838.1

Location: 1117438..1117680 (243 bp)
Type: Others
Protein ID: WP_009901430.1

Location: 1117990..1118553 (564 bp)
Type: Others
Protein ID: WP_011861028.1

Location: 1118565..1119464 (900 bp)
Type: Others
Protein ID: WP_011861029.1

Location: 1119464..1119697 (234 bp)
Type: Others
Protein ID: WP_009896624.1

Location: 1119707..1120108 (402 bp)
Type: Others
Protein ID: WP_009888836.1

Location: 1120102..1120449 (348 bp)
Type: Others
Protein ID: WP_003429844.1

Location: 1120449..1120874 (426 bp)
Type: Others
Protein ID: WP_011861030.1

Location: 1120867..1121304 (438 bp)
Type: Others
Protein ID: WP_009901504.1

Location: 1121297..1121473 (177 bp)
Type: Others
Protein ID: WP_011861031.1

Location: 1121475..1122785 (1311 bp)
Type: Others
Protein ID: WP_011861032.1

Location: 1122802..1123272 (471 bp)
Type: Others
Protein ID: WP_003429851.1

Location: 1123344..1123784 (441 bp)
Type: Others
Protein ID: WP_003429853.1

Location: 1124125..1124286 (162 bp)
Type: Toxin
Protein ID: WP_003429855.1

Location: 1125950..1126510 (561 bp)
Type: Others
Protein ID: WP_011861034.1

Location: 1126554..1127123 (570 bp)
Type: Others
Protein ID: WP_011861035.1

Location: 1127194..1129545 (2352 bp)
Type: Others
Protein ID: WP_011861036.1

Location: 1129561..1130250 (690 bp)
Type: Others
Protein ID: WP_011861037.1

Location: 1130243..1132213 (1971 bp)
Type: VF
Protein ID: WP_011861038.1

Location: 1132227..1132487 (261 bp)
Type: Others
Protein ID: WP_009901352.1

Location: 1132492..1132911 (420 bp)
Type: Others
Protein ID: WP_011861039.1

Location: 1132912..1133961 (1050 bp)
Type: Others
Protein ID: WP_011861040.1

Location: 1133954..1134571 (618 bp)
Type: Others
Protein ID: WP_011861041.1

Location: 1134583..1135386 (804 bp)
Type: Others
Protein ID: WP_011861042.1

Location: 1135404..1137101 (1698 bp)
Type: Others
Protein ID: WP_021413561.1

Location: 1137118..1137411 (294 bp)
Type: Others
Protein ID: WP_011861044.1

Location: 1137411..1137593 (183 bp)
Type: Others
Protein ID: WP_011861045.1

Location: 1137628..1137858 (231 bp)
Type: Others
Protein ID: WP_011861046.1

Location: 1137878..1138138 (261 bp)
Type: Others
Protein ID: WP_011861047.1

Location: 1138135..1138950 (816 bp)
Type: Others
Protein ID: WP_011861048.1

Location: 1138967..1139263 (297 bp)
Type: Others
Protein ID: WP_011861049.1

Location: 1139809..1140372 (564 bp)
Type: Others
Protein ID: WP_021371073.1

Location: 1140390..1140821 (432 bp)
Type: Others
Protein ID: WP_011861052.1

Location: 1140823..1141527 (705 bp)
Type: Others
Protein ID: WP_011861053.1

Location: 1142224..1142367 (144 bp)
Type: Toxin
Protein ID: WP_011861054.1

Location: 1142981..1143262 (282 bp)
Type: Others
Protein ID: WP_009898394.1

Location: 1143302..1143688 (387 bp)
Type: Others
Protein ID: WP_011861055.1

Location: 1143874..1144398 (525 bp)
Type: Others
Protein ID: Protein_1009

Location: 1144782..1146020 (1239 bp)
Type: Others
Protein ID: WP_011861056.1

Location: 1146049..1146936 (888 bp)
Type: Others
Protein ID: WP_011861057.1

Location: 1146970..1147599 (630 bp)
Type: Others
Protein ID: WP_011861058.1

Location: 1147604..1148068 (465 bp)
Type: Others
Protein ID: WP_003437111.1

Location: 1073975..1074175 (201 bp)
Type: Others
Protein ID: WP_003418660.1

Location: 1088175..1089293 (1119 bp)
Type: Integrase
Protein ID: WP_011860983.1

Location: 1089801..1091465 (1665 bp)
Type: Others
Protein ID: WP_011860984.1

Location: 1091736..1093184 (1449 bp)
Type: Others
Protein ID: WP_011860985.1

Location: 1093832..1094164 (333 bp)
Type: Others
Protein ID: WP_011860986.1

Location: 1095643..1096212 (570 bp)
Type: Others
Protein ID: WP_022583275.1

Location: 1111883..1112200 (318 bp)
Type: Others
Protein ID: WP_009894743.1

Location: 1124206..1124339 (134 bp)
Type: Antitoxin
Protein ID: -

Location: 1141775..1141963 (189 bp)
Type: Others
Protein ID: WP_009898401.1

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Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
CD630_RS05045 (CD630_08920)	1073975..1074175	-	201	WP_003418660.1	cold-shock protein	-
CD630_RS05050 (CD630_08930)	1074642..1076132	+	1491	WP_009888725.1	4Fe-4S dicluster domain-containing protein	-
CD630_RS05055 (CD630_08940)	1076412..1077908	+	1497	WP_009895925.1	4Fe-4S dicluster domain-containing protein	-
CD630_RS05060 (CD630_08950)	1078053..1078967	+	915	WP_011860980.1	ComE operon protein 3	VF
CD630_RS05065 (CD630_08960)	1079085..1079276	+	192	WP_003418667.1	hypothetical protein	-
CD630_RS05070 (CD630_08970)	1079499..1079849	+	351	WP_003437137.1	hypothetical protein	-
CD630_RS05075 (CD630_08980)	1080111..1081616	+	1506	WP_003437136.1	DUF1846 domain-containing protein	-
CD630_RS05080 (CD630_08990)	1082006..1083103	+	1098	WP_011860981.1	DNA polymerase IV	-
CD630_RS05085 (CD630_09000)	1083366..1084502	+	1137	WP_003437132.1	Carnitine transport ATP-binding protein OpuCA	VF
CD630_RS05090 (CD630_09010)	1084495..1086042	+	1548	WP_021361803.1	ABC transporter permease subunit	-
CD630_RS05095 (CD630_09020)	1086376..1087242	+	867	WP_003437125.1	cation diffusion facilitator family transporter	-
CD630_RS05100	1087383..1088021	+	639	Protein_924	aldo/keto reductase	-
CD630_RS05105 (CD630_09040)	1088175..1089293	-	1119	WP_011860983.1	Tyrosine recombinase XerC ; Integrase	Integrase
CD630_RS05110 (CD630_09050)	1089801..1091465	-	1665	WP_011860984.1	DUF4041 domain-containing protein	-
CD630_RS05115 (CD630_09060)	1091736..1093184	-	1449	WP_011860985.1	SAP domain-containing protein	-
CD630_RS05120 (CD630_09070)	1093832..1094164	-	333	WP_011860986.1	helix-turn-helix transcriptional regulator	-
CD630_RS05125 (CD630_09071)	1094326..1094514	+	189	WP_011860987.1	helix-turn-helix transcriptional regulator	-
CD630_RS05130 (CD630_09080)	1094548..1095342	+	795	WP_011860988.1	ORF6N domain-containing protein	-
CD630_RS05135 (CD630_09090)	1095404..1095604	+	201	WP_011860989.1	hypothetical protein	-
CD630_RS05140 (CD630_09100)	1095643..1096212	-	570	WP_022583275.1	hypothetical protein	-

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Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

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Detail	Organism	MGE type	Related TA	Genome accession	Coordinates	Mash distance
	Clostridioides difficile 630	Prophage	TA53077, TA53081	NZ_CP010905	1056256..1128312	0.003
	Clostridioides difficile strain 630 delta erm	Prophage	TA64399, TA64403	NZ_CP016318	1076912..1148967	0.003
	Clostridioides difficile strain 630Derm	Prophage	TA285464, TA285467	NZ_LN614756	1076912..1148967	0.003