TADB

TAfinder detailed results

Overview
Genomic Context
Domains
Sequences
Similar Proteins

Overview

Job ID	wrVbGpMxFf
Sequence name	NULL
Predicted type	I

Toxin (Protein)

Predicted family	hokX (T10211)	Predicted domain	-
Locus tag	orf988	Length	50 a.a.
Coordinates	1059075..1059227 (+)

Antitoxin (RNA)

Predicted family	sokX (AT10211)	Predicted domain	-
Locus tag	NuclAT_25	Length	55 bp
Coordinates	1058981..1059035 (-)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin

No domain identified.

Sequences

Download Length: 50 a.a. Molecular weight: 5602.81 Da Isoelectric Point: 7.7899

                                        >ORF988 TA_11 Toxin

MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK

Download Length: 153 bp

                                        >ORF988 TA_11 Toxin

ATGCTGACAAAATATGCCCTTGTGGCAATCATAGTGCTGTGTTTTACAGTACTGGGATTC

ACGCTGATGGTAGGCGACTCGTTGTGTGAGTTGAGTATCAGAGAACGTGGTATGGAGTTT

AAGGCAGTTCTCGCTTACGAATCGAAGAAGTAG

Antitoxin

Nucleotide

Download Length: 55 bp

                                        >NuclAT_25 TA_11 Antitoxin

ACAAAAGCCCCAGGCGATATTTCTATCAACCTGAGGCTTACGTTCGAACCCAAAC

Similar Proteins

Only experimentally validated proteins are listed.

Toxin
Antitoxin

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
T10211	E.coli NADPH-sulfite reductase flavoprotein component (cysJ) NADPH-sulfite reductase hemoprotein component (cysI) and 3'	74	100	0.74
T10208	Escherichia coli C	50	100	0.5
T6369	Escherichia coli K-12	42.857	100	0.42
T10210	Hafnia alvei	50	96.154	0.5
T6370	Escherichia coli	42	100	0.42
T6324	Escherichia coli	40	96.154	0.4
T6363	uncultured bacterium	40	96.154	0.4
T10039	Escherichia coli O157:H7 str. Sakai	40.426	92.157	0.38
T10209	Escherichia coli strain ECOR24	39.13	92	0.36
T10124	Erwinia amylovora ATCC 49946	41.935	96.875	0.26

Protein	Organism	Identities (%)	Coverage (%)	H_a-value