TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NULL
Predicted type I

Toxin (Protein)


Predicted family hokC (T10209) Predicted domain -
Locus tag orf3816 Length 69 a.a.
Coordinates 4067637..4067846 (+)

Antitoxin (RNA)


Predicted family sokC (AT10209) Predicted domain -
Locus tag NuclAT_21 Length 58 bp
Coordinates 4067588..4067645 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 69 a.a.        Molecular weight: 7742.28 Da        Isoelectric Point: 9.3680

>ORF3816 TA_27 Toxin
MLNTCRVPLTDRKVKEKRAMKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEV
AVFTAYESE

Download         Length: 210 bp

>ORF3816 TA_27 Toxin
ATGCTGAACACATGTAGAGTGCCTCTTACTGACCGTAAGGTCAAGGAGAAGAGAGCAATG
AAGCAGCATAAGGCGATGATTGTCGCCCTGATCGTCATCTGTATCACCGCCGTAGTGGCG
GCGCTGGTAACGAGAAAAGACCTCTGTGAGGTTCACATCCGAACTGGCCAGACGGAGGTT
GCTGTTTTCACGGCTTACGAATCCGAGTAA

Antitoxin


Download         Length: 58 bp

>NuclAT_21 TA_27 Antitoxin
TAGAGAAAAGCCCCGAGTGATATTTTACTATCAACCCGAGGCCCCCTATATGCTGAAC

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10209 Escherichia coli strain ECOR24

100

100

0.725
T10039 Escherichia coli O157:H7 str. Sakai

80

98.039

0.58
T6324 Escherichia coli

40.909

84.615

0.261
T6363 uncultured bacterium

40.909

84.615

0.261
T10210 Hafnia alvei

41.304

88.462

0.275
T10208 Escherichia coli C

41.86

86

0.261
T6369 Escherichia coli K-12

37.778

91.837

0.246
T10124 Erwinia amylovora ATCC 49946

50

93.75

0.217
T6370 Escherichia coli

31.111

90

0.203
Protein Organism Identities (%) Coverage (%) Ha-value