TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NULL | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | higA (AT6088) | Predicted domain | PRK10072 (HTH) |
| Locus tag | orf174 | Length | 96 a.a. |
| Coordinates | 185206..185496 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 11032.87 Da Isoelectric Point: 8.0395
>ORF174 Orphan_TA_2 Antitoxin
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV
AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV
AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME
Download Length: 291 bp
>ORF174 Orphan_TA_2 Antitoxin
CTATTCCATCAACTGCTTACTTAATGCCGGGTTGGCTTGAATCAAACGCATCAATTTTAG
TTCGGCACTTGAAGGCTTCACGCGTCTGGATTCCCATTCCTTTACCATGGCGACTGATAC
GCCCAAAACCCGGGCGAAATCATCGATTTTTAACCCTGTCCCTTTTCGTAACTGCTCAAT
TTCGGTACAGGACGTTGTTCTGTGCGTCAGGGTAATTTTCTGCGTTTCATCTTTAAAAAC
AATCTGTTCCAGGCTGCTCAACAGCTCATGCATTGGATCTTTATATTCCAT
CTATTCCATCAACTGCTTACTTAATGCCGGGTTGGCTTGAATCAAACGCATCAATTTTAG
TTCGGCACTTGAAGGCTTCACGCGTCTGGATTCCCATTCCTTTACCATGGCGACTGATAC
GCCCAAAACCCGGGCGAAATCATCGATTTTTAACCCTGTCCCTTTTCGTAACTGCTCAAT
TTCGGTACAGGACGTTGTTCTGTGCGTCAGGGTAATTTTCTGCGTTTCATCTTTAAAAAC
AATCTGTTCCAGGCTGCTCAACAGCTCATGCATTGGATCTTTATATTCCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT303 | Pseudomonas putida KT2440 |
25.316 |
83.158 |
0.208 |
| AT6088 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
30.769 |
61.905 |
0.167 |
| AT174 | Vibrio cholerae O1 biovar El Tor str. N16961 |
27.368 |
91.346 |
0.271 |
| AT1005 | Escherichia coli O157:H7 str. Sakai |
27.451 |
46.789 |
0.146 |
| AT6100 | Escherichia coli str. K-12 substr. MG1655 |
22.807 |
43.511 |
0.135 |
| AT1045 | Escherichia coli str. K-12 substr. MG1655 |
22.807 |
43.511 |
0.135 |
| AT611 | Staphylococcus aureus subsp. aureus MW2 |
35.484 |
28.972 |
0.115 |