TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Toxin (Protein)
| Predicted family | zeta (T6104) | Predicted domain | - |
| Locus tag | orf2448 | Length | 248 a.a. |
| Coordinates | 2588454..2589200 (-) |
Antitoxin (Protein)
| Predicted family | - | Predicted domain | PF12840 (HTH_20) |
| Locus tag | orf2447 | Length | 253 a.a. |
| Coordinates | 2587670..2588431 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2442 | 2583059..2583214 | - | 156 | ORF2442 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2443 | 2583845..2584822 | - | 978 | ORF2443 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2444 | 2584819..2585928 | - | 1110 | ORF2444 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2445 | 2585921..2587048 | - | 1128 | ORF2445 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2446 | 2587232..2587654 | - | 423 | ORF2446 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2447 | 2587670..2588431 | - | 762 | ORF2447 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2448 | 2588454..2589200 | - | 747 | ORF2448 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf2449 | 2589207..2590064 | - | 858 | ORF2449 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2450 | 2590077..2590499 | - | 423 | ORF2450 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2451 | 2590496..2590750 | - | 255 | ORF2451 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2452 | 2590830..2591249 | + | 420 | ORF2452 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2453 | 2591680..2591832 | + | 153 | ORF2453 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2454 | 2592253..2592474 | + | 222 | ORF2454 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2455 | 2592474..2592644 | + | 171 | ORF2455 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2456 | 2592719..2592994 | + | 276 | ORF2456 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Toxin
No domain identified.
Antitoxin
PF12840 (HTH_20) (E-value: 0.0012, Score:15.7)
PF13412 (HTH_24) (E-value: 0.0013, Score:14.9)
PF01978 (TrmB) (E-value: 0.12, Score:10.4)
PF12840 (HTH_20) (E-value: 93, Score:-0.4)
Sequences
Toxin
Download Length: 248 a.a. Molecular weight: 28226.31 Da Isoelectric Point: 9.9181
>ORF2448 TA_19 Toxin
MKNIATGDVLERIRRLAPSHVTAPFKTVAEWREWQLSEGQKRCEEINRQNRQLRVEKILN
RSGIQPLHRKCSFSNYQVQNEGQRYALSQAKSIADELMTRCTNFAFSGKPGTGKNHLAAA
IGNRLLKDGQTVIVVTVADVMSALHASYDDGQSGEKFLRELCQVDLLVLDEIGIQRETKN
EQVVLHQIVDRRTASMRSVGMLTNLNYEAMKTLLGERIMDRMTMNGGRWVNFNWESWRPN
VVQPGIAK
MKNIATGDVLERIRRLAPSHVTAPFKTVAEWREWQLSEGQKRCEEINRQNRQLRVEKILN
RSGIQPLHRKCSFSNYQVQNEGQRYALSQAKSIADELMTRCTNFAFSGKPGTGKNHLAAA
IGNRLLKDGQTVIVVTVADVMSALHASYDDGQSGEKFLRELCQVDLLVLDEIGIQRETKN
EQVVLHQIVDRRTASMRSVGMLTNLNYEAMKTLLGERIMDRMTMNGGRWVNFNWESWRPN
VVQPGIAK
Download Length: 747 bp
>ORF2448 TA_19 Toxin
TTACTTCGCAATTCCTGGCTGGACGACATTCGGACGCCAGCTCTCCCAGTTAAAATTCAC
CCATCGCCCGCCGTTCATGGTCATGCGATCCATAATCCTCTCGCCGAGCAATGTTTTCAT
GGCCTCATAATTCAGGTTTGTCAGCATCCCCACGCTGCGCATCGACGCTGTCCGGCGATC
AACAATCTGGTGCAGCACCACCTGCTCGTTTTTTGTCTCGCGCTGAATGCCAATTTCATC
AAGAACCAGCAGATCCACTTGGCACAGTTCCCGCAAAAATTTTTCGCCTGATTGCCCGTC
GTCATAGCTGGCGTGTAGGGCACTCATGACATCAGCCACGGTAACCACAATCACTGTCTG
GCCATCTTTCAGCAGGCGATTCCCAATAGCCGCCGCCAGATGGTTTTTTCCGGTACCAGG
TTTTCCGCTGAACGCAAAATTTGTACACCTGGTCATCAGTTCATCAGCGATGGATTTCGC
CTGACTCAACGCGTATCGCTGCCCTTCGTTCTGCACCTGGTAATTCGAAAACGAGCATTT
GCGGTGCAATGGCTGGATGCCAGAGCGATTCAGAATTTTTTCCACCCGCAACTGACGATT
CTGACGGTTGATCTCCTCACAACGTTTCTGGCCTTCGGAAAGTTGCCACTCGCGCCACTC
CGCTACCGTCTTGAATGGCGCGGTTACATGTGACGGGGCCAGTCTGCGGATACGTTCAAG
AACATCGCCTGTCGCAATATTTTTCAT
TTACTTCGCAATTCCTGGCTGGACGACATTCGGACGCCAGCTCTCCCAGTTAAAATTCAC
CCATCGCCCGCCGTTCATGGTCATGCGATCCATAATCCTCTCGCCGAGCAATGTTTTCAT
GGCCTCATAATTCAGGTTTGTCAGCATCCCCACGCTGCGCATCGACGCTGTCCGGCGATC
AACAATCTGGTGCAGCACCACCTGCTCGTTTTTTGTCTCGCGCTGAATGCCAATTTCATC
AAGAACCAGCAGATCCACTTGGCACAGTTCCCGCAAAAATTTTTCGCCTGATTGCCCGTC
GTCATAGCTGGCGTGTAGGGCACTCATGACATCAGCCACGGTAACCACAATCACTGTCTG
GCCATCTTTCAGCAGGCGATTCCCAATAGCCGCCGCCAGATGGTTTTTTCCGGTACCAGG
TTTTCCGCTGAACGCAAAATTTGTACACCTGGTCATCAGTTCATCAGCGATGGATTTCGC
CTGACTCAACGCGTATCGCTGCCCTTCGTTCTGCACCTGGTAATTCGAAAACGAGCATTT
GCGGTGCAATGGCTGGATGCCAGAGCGATTCAGAATTTTTTCCACCCGCAACTGACGATT
CTGACGGTTGATCTCCTCACAACGTTTCTGGCCTTCGGAAAGTTGCCACTCGCGCCACTC
CGCTACCGTCTTGAATGGCGCGGTTACATGTGACGGGGCCAGTCTGCGGATACGTTCAAG
AACATCGCCTGTCGCAATATTTTTCAT
Antitoxin
Download Length: 253 a.a. Molecular weight: 27854.65 Da Isoelectric Point: 6.2823
>ORF2447 TA_19 Antitoxin
METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQE
QPAPAELPEETTTATVAKISESDLTATIEQRGPLTADELATLFGTTSRKVASTLAMAISK
ARLIRVNQNGKFRYCMPGGNLPAEPKAASVAETDGKAFPQLAGVALPVQEAATQEDIKTE
TVADIVQSLPSFTETQADNLILPSLHMANRELRRAKNHVQKWERVCAALRELNKHRDIVR
QITDSSRRVVSEK
METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQE
QPAPAELPEETTTATVAKISESDLTATIEQRGPLTADELATLFGTTSRKVASTLAMAISK
ARLIRVNQNGKFRYCMPGGNLPAEPKAASVAETDGKAFPQLAGVALPVQEAATQEDIKTE
TVADIVQSLPSFTETQADNLILPSLHMANRELRRAKNHVQKWERVCAALRELNKHRDIVR
QITDSSRRVVSEK
Download Length: 762 bp
>ORF2447 TA_19 Antitoxin
TCACTTTTCCGATACAACACGGCGGGAAGAATCAGTAATCTGTCGAACAATATCCCGGTG
CTTGTTCAGCTCCCGCAGCGCGGCGCAGACTCGCTCCCACTTCTGGACATGATTTTTCGC
CCGACGCAGTTCACGGTTTGCCATATGCAGCGATGGTAAAATCAGGTTATCCGCTTGCGT
TTCAGTAAACGATGGCAACGACTGCACAATGTCCGCCACAGTTTCTGTTTTAATATCTTC
CTGTGTTGCAGCTTCCTGTACTGGTAACGCAACACCGGCTAGCTGAGGAAAGGCTTTACC
ATCTGTTTCCGCTACCGATGCAGCTTTCGGCTCTGCTGGTAAATTACCGCCCGGCATGCA
GTAACGAAATTTACCGTTCTGATTAACGCGAATCAGACGAGCTTTGCTGATTGCCATTGC
CAGCGTTGAAGCCACTTTGCGGGATGTGGTACCGAACAACGTAGCCAGTTCATCCGCAGT
TAGTGGACCACGTTGTTCAATCGTCGCAGTTAAATCGCTCTCTGAAATTTTCGCGACTGT
TGCCGTGGTAGTTTCTTCCGGCAGTTCTGCCGGCGCTGGCTGTTCCTGCTGAACGTTGTT
ATCAGCCACACGCCAGGTGTACGCGCTTTTATCAACGAAACCAGCCTTTTTCAGTTCCCA
TAGTTCGTTCAGCACTTCTTCACGGCTGATATCAAGTCGCGCAGCAAGTTCTATGGATGT
GGCTTTTCCCATTGCTTTCAGTGCGTCAAAAACAGTCTCCAT
TCACTTTTCCGATACAACACGGCGGGAAGAATCAGTAATCTGTCGAACAATATCCCGGTG
CTTGTTCAGCTCCCGCAGCGCGGCGCAGACTCGCTCCCACTTCTGGACATGATTTTTCGC
CCGACGCAGTTCACGGTTTGCCATATGCAGCGATGGTAAAATCAGGTTATCCGCTTGCGT
TTCAGTAAACGATGGCAACGACTGCACAATGTCCGCCACAGTTTCTGTTTTAATATCTTC
CTGTGTTGCAGCTTCCTGTACTGGTAACGCAACACCGGCTAGCTGAGGAAAGGCTTTACC
ATCTGTTTCCGCTACCGATGCAGCTTTCGGCTCTGCTGGTAAATTACCGCCCGGCATGCA
GTAACGAAATTTACCGTTCTGATTAACGCGAATCAGACGAGCTTTGCTGATTGCCATTGC
CAGCGTTGAAGCCACTTTGCGGGATGTGGTACCGAACAACGTAGCCAGTTCATCCGCAGT
TAGTGGACCACGTTGTTCAATCGTCGCAGTTAAATCGCTCTCTGAAATTTTCGCGACTGT
TGCCGTGGTAGTTTCTTCCGGCAGTTCTGCCGGCGCTGGCTGTTCCTGCTGAACGTTGTT
ATCAGCCACACGCCAGGTGTACGCGCTTTTATCAACGAAACCAGCCTTTTTCAGTTCCCA
TAGTTCGTTCAGCACTTCTTCACGGCTGATATCAAGTCGCGCAGCAAGTTCTATGGATGT
GGCTTTTCCCATTGCTTTCAGTGCGTCAAAAACAGTCTCCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T6104 | Enterococcus faecalis |
32.653 |
17.073 |
0.065 |
| T6092 | Staphylococcus aureus |
30.612 |
17.073 |
0.06 |
| T6079 | Streptococcus pyogenes |
30.612 |
17.073 |
0.06 |
| T6024 | Streptococcus pyogenes |
30.612 |
17.073 |
0.06 |
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|