TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Toxin (Protein)


Predicted family ataT (T200) Predicted domain COG2153 (ElaA)
Locus tag orf280 Length 175 a.a.
Coordinates 307787..308314 (+)

Antitoxin (Protein)


Predicted family ataR (AT200) Predicted domain COG4453 (DUF1778)
Locus tag orf279 Length 88 a.a.
Coordinates 307514..307780 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf275 303172..303840 + 669 ORF275 Predicted ORF by PRODIGAL Version 1.20 -
orf276 303833..304891 + 1059 ORF276 Predicted ORF by PRODIGAL Version 1.20 -
orf277 305136..305990 + 855 ORF277 Predicted ORF by PRODIGAL Version 1.20 -
orf278 306261..307364 + 1104 ORF278 Predicted ORF by PRODIGAL Version 1.20 -
orf279 307514..307780 + 267 ORF279 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf280 307787..308314 + 528 ORF280 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf281 308311..308694 - 384 ORF281 Predicted ORF by PRODIGAL Version 1.20 -
orf282 309118..310227 + 1110 ORF282 Predicted ORF by PRODIGAL Version 1.20 -
orf283 310275..311201 + 927 ORF283 Predicted ORF by PRODIGAL Version 1.20 -
orf284 311198..312475 + 1278 ORF284 Predicted ORF by PRODIGAL Version 1.20 -
orf285 312472..313239 + 768 ORF285 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin

COG2153 (ElaA) (E-value: 9.8e-05, Score:20.2)

(75-134)

PRK10514 (E-value: 0.0053, Score:14.5)

(68-122)

PF13508 (Acetyltransf_7) (E-value: 0.0078, Score:13.1)

(65-110)

PF00583 (GNAT) (E-value: 0.015, Score:12.7)

(101-153)

COG1246 (ArgA) (E-value: 0.02, Score:11.7)

(358-407)

Antitoxin

COG4453 (DUF1778) (E-value: 2.5e-31, Score:106.6)

(65-150)

PF08681 (DUF1778) (E-value: 1.2e-18, Score:65.1)

(9-87)

PF01402 (RHH) (E-value: 0.00019, Score:19.5)

(9-62)


Sequences

Toxin        


Download         Length: 175 a.a.        Molecular weight: 19691.70 Da        Isoelectric Point: 7.7457

>ORF280 TA_5 Toxin
MDDLTIEILTDDADYDLQRFDCGEEALNLFLTTHLVRQHRNKILRAYILCRNTPERQVLG
YYTLCGSCFERAALPSKSKQKKIPYKNIPSVTLGRLAIDRSLQGQGWGATLVAHAMKVVW
SASLAVGIHGLFVEALNKKAHTFYQSLGFIPLVGENENALFFPTKSIELLFTQSD

Download         Length: 528 bp

>ORF280 TA_5 Toxin
ATGGATGATCTGACGATAGAGATTCTGACCGATGATGCAGATTATGATCTACAGCGATTC
GACTGCGGCGAGGAAGCGTTAAATCTCTTTCTGACGACACATCTCGTTCGTCAACATCGC
AACAAAATTCTGCGAGCGTATATCCTTTGTCGCAACACTCCAGAACGTCAGGTGCTGGGA
TATTACACATTATGCGGCAGTTGTTTTGAACGAGCCGCATTGCCCTCGAAATCGAAACAG
AAAAAAATTCCCTACAAAAATATTCCCAGCGTTACTCTTGGGCGTCTGGCAATTGATCGT
TCATTACAGGGGCAGGGATGGGGAGCAACACTGGTTGCTCATGCCATGAAAGTCGTCTGG
TCAGCCTCTTTAGCGGTAGGTATTCACGGTCTTTTTGTCGAGGCGCTGAATAAAAAAGCC
CATACGTTTTATCAATCGCTGGGCTTTATCCCGTTGGTCGGAGAAAACGAAAATGCGTTA
TTTTTCCCAACCAAATCCATCGAACTGCTTTTCACACAGAGCGATTAA

Antitoxin


Download         Length: 88 a.a.        Molecular weight: 9910.31 Da        Isoelectric Point: 10.0863

>ORF279 TA_5 Antitoxin
MSAVKKQRIDLRLTDDDKSMIEEAAAISNQSVSQFMLNSASQRAAEVIEQHRRVILNEES
WTRVMDALSNPPSPGEKLKRAAKRLQGM

Download         Length: 267 bp

>ORF279 TA_5 Antitoxin
ATGTCTGCTGTTAAAAAGCAGCGTATCGATCTGCGTTTAACTGACGATGACAAAAGTATG
ATTGAGGAAGCGGCAGCGATATCTAATCAGTCCGTCAGCCAATTTATGTTGAACAGCGCT
TCGCAGCGGGCTGCGGAAGTGATTGAACAGCATCGGCGGGTGATCCTCAATGAGGAATCC
TGGACGCGGGTGATGGATGCGCTGAGTAATCCACCGTCACCTGGTGAAAAGCTAAAACGT
GCGGCAAAACGTCTTCAGGGAATGTAA

Similar Proteins

Only experimentally validated proteins are listed.