TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | panT (T10008) | Predicted domain | - |
| Locus tag | orf2939 | Length | 85 a.a. |
| Coordinates | 3103309..3103566 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2929 | 3099166..3100278 | - | 1113 | ORF2929 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2930 | 3100629..3101105 | - | 477 | ORF2930 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2931 | 3101193..3102095 | - | 903 | ORF2931 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2932 | 3102156..3102878 | - | 723 | ORF2932 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2933 | 3102862..3103149 | - | 288 | ORF2933 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2934 | 3103309..3103566 | + | 258 | ORF2934 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf2935 | 3103596..3103973 | - | 378 | ORF2935 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2936 | 3104243..3105928 | + | 1686 | ORF2936 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2937 | 3106164..3106382 | - | 219 | ORF2937 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2938 | 3106473..3107573 | - | 1101 | ORF2938 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2939 | 3107570..3108055 | - | 486 | ORF2939 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 9684.85 Da Isoelectric Point: 4.5720
>ORF2934 Orphan_TA_68 Toxin
MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVP
QIFVDQQHIGGYTDFAAWVKENLDA
MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVP
QIFVDQQHIGGYTDFAAWVKENLDA
Download Length: 258 bp
>ORF2934 Orphan_TA_68 Toxin
ATGCAAACCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTG
GCTGAGAAATTGAGCAATGAACGCGATGATTTTCAGTATCAGTATGTAGATATTCGTGCG
GAAGGGATCACTAAAGAAGATCTACAACAAAAGGCAGGTAAACCCGTAGAAACCGTGCCG
CAGATTTTTGTCGATCAGCAACATATCGGCGGCTATACCGATTTTGCTGCATGGGTGAAA
GAAAATCTGGACGCCTGA
ATGCAAACCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTG
GCTGAGAAATTGAGCAATGAACGCGATGATTTTCAGTATCAGTATGTAGATATTCGTGCG
GAAGGGATCACTAAAGAAGATCTACAACAAAAGGCAGGTAAACCCGTAGAAACCGTGCCG
CAGATTTTTGTCGATCAGCAACATATCGGCGGCTATACCGATTTTGCTGCATGGGTGAAA
GAAAATCTGGACGCCTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T10008 | Helicobacter sp. 13S00482-2 NODE_7_length_88364_cov_126.498_ID_13 |
37.143 |
12.963 |
0.153 |