TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Toxin (Protein)


Predicted family VbhT (T10186) Predicted domain PRK10347 (Fic)
Locus tag orf381 Length 200 a.a.
Coordinates 418140..418742 (+)

Antitoxin (Protein)


Predicted family - Predicted domain PF10832 (YhfG)
Locus tag orf380 Length 55 a.a.
Coordinates 417983..418150 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf377 413049..415592 - 2544 ORF377 Predicted ORF by PRODIGAL Version 1.20 -
orf378 415854..417035 - 1182 ORF378 Predicted ORF by PRODIGAL Version 1.20 -
orf379 417306..417878 + 573 ORF379 Predicted ORF by PRODIGAL Version 1.20 -
orf380 417983..418150 + 168 ORF380 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf381 418140..418742 + 603 ORF381 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf382 418774..419337 + 564 ORF382 Predicted ORF by PRODIGAL Version 1.20 -
orf383 419423..420643 + 1221 ORF383 Predicted ORF by PRODIGAL Version 1.20 -
orf384 420710..422800 - 2091 ORF384 Predicted ORF by PRODIGAL Version 1.20 -
orf385 422851..423483 - 633 ORF385 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin

PRK10347 (Fic) (E-value: 1.6e-123, Score:408)

(1-200)

PF02661 (Fic) (E-value: 0.0014, Score:15.9)

(240-311)

Antitoxin

PF10832 (YhfG) (E-value: 1e-38, Score:129.2)

(2-55)

PRK10204 (E-value: 4.5e-35, Score:117.3)

(1-55)


Sequences

Toxin        


Download         Length: 200 a.a.        Molecular weight: 22940.98 Da        Isoelectric Point: 4.9406

>ORF381 TA_7 Toxin
MSDKFGEGRDPYLYPGLDIMRNRLNIHQQQRLEQAAYEMTALRAATIELGPLVRGLPHLR
TIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNALMQDLEEEGYLVGLEKAKF
VERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQLSWQGIEKEAWNQANQSGAMG
DLTALQMIFSKVVSEAGESE

Download         Length: 603 bp

>ORF381 TA_7 Toxin
ATGAGCGATAAATTCGGCGAAGGGCGCGATCCGTATCTTTATCCTGGCCTTGATATCATG
CGTAACCGGCTGAACATCCACCAGCAGCAGCGGCTGGAACAGGCCGCTTACGAAATGACG
GCGCTGCGTGCTGCGACCATTGAGCTTGGTCCGCTGGTGCGCGGTTTACCGCATTTGCGC
ACTATCCATCGCCAGCTGTATCAGGATATTTTCGACTGGGCGGGGCAACTGCGTGAAGTT
GATATTTATCAGGGTGATACGCCGTTCTGCCACTTTGCTTATATCGAAAAAGAGGGCAAT
GCCCTGATGCAGGATCTGGAGGAAGAAGGTTATCTGGTTGGCCTGGAGAAAGCGAAGTTC
GTCGAGCGGCTGGCGCATTACTATTGTGAAATCAACGTGCTGCATCCCTTCCGGGTGGGA
AGTGGTCTGGCACAGCGGATCTTCTTCGAGCAACTGGCGATTCATGCCGGATATCAACTG
AGCTGGCAGGGTATCGAAAAAGAGGCCTGGAATCAGGCAAATCAGAGTGGGGCAATGGGG
GATCTCACCGCACTGCAGATGATATTTAGCAAAGTGGTAAGCGAAGCCGGGGAATCTGAG
TAA

Antitoxin


Download         Length: 55 a.a.        Molecular weight: 6635.66 Da        Isoelectric Point: 11.1273

>ORF380 TA_7 Antitoxin
VKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALARLEELRRHYER

Download         Length: 168 bp

>ORF380 TA_7 Antitoxin
GTGAAGAAACTCACCGATAAGCAAAAGTCCCGTCTCTGGGAGCTTCAGCGTAATCGTAAT
TTCCAGGCCAGTCGCCGTCTTGAAGGCGTCGAGATGCCTTTAGTCACTCTTACTGCCGCA
GAGGCTTTAGCGCGCCTTGAAGAGCTGAGGAGGCACTATGAGCGATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10186 Bartonella schoenbuchensis R1

33.673

41.004

0.33
T10184 Campylobacter fetus subsp. venerealis str. 84-112

34.483

65.022

0.25
T10048 Mycoplasma mycoides subsp. capri str. GM12

33.981

55.08

0.175
Protein Organism Identities (%) Coverage (%) Ha-value