TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Toxin (Protein)


Predicted family PrpT (T10079) Predicted domain COG3668 (ParE)
Locus tag orf1685 Length 98 a.a.
Coordinates 1792645..1792941 (-)

Antitoxin (Protein)


Predicted family PrpA (AT10079) Predicted domain TIGR02606 (CC2985)
Locus tag orf1686 Length 83 a.a.
Coordinates 1792943..1793194 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf1681 1788967..1789446 + 480 ORF1681 Predicted ORF by PRODIGAL Version 1.20 -
orf1682 1789446..1790609 + 1164 ORF1682 Predicted ORF by PRODIGAL Version 1.20 -
orf1683 1790609..1790908 + 300 ORF1683 Predicted ORF by PRODIGAL Version 1.20 -
orf1684 1791181..1792542 - 1362 ORF1684 Predicted ORF by PRODIGAL Version 1.20 -
orf1685 1792645..1792941 - 297 ORF1685 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf1686 1792943..1793194 - 252 ORF1686 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf1687 1793448..1793780 - 333 ORF1687 Predicted ORF by PRODIGAL Version 1.20 -
orf1688 1793971..1794693 - 723 ORF1688 Predicted ORF by PRODIGAL Version 1.20 -
orf1689 1794690..1796093 - 1404 ORF1689 Predicted ORF by PRODIGAL Version 1.20 -
orf1690 1796090..1797505 - 1416 ORF1690 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin

COG3668 (ParE) (E-value: 3.1e-06, Score:25.7)

(8-99)

Antitoxin

TIGR02606 (CC2985) (E-value: 2.2e-26, Score:90.1)

(2-79)

PF03693 (RHH) (E-value: 2.8e-21, Score:73.7)

(1-76)

COG3609 (ParD) (E-value: 2.1e-09, Score:36)

(6-81)


Sequences

Toxin        


Download         Length: 98 a.a.        Molecular weight: 11508.09 Da        Isoelectric Point: 6.2099

>ORF1685 TA_13 Toxin
VRIIKLMPKANEDLEGIWYYSYHHFGEPQADRYVEHLSDVLQILSNNNIGTPRPELGEGI
FVLPFERHVIYFLQSPGEIIVIRILNQNQDATRHLHWS

Download         Length: 297 bp

>ORF1685 TA_13 Toxin
TTAGCTCCAGTGTAAATGTCTGGTGGCGTCCTGGTTTTGGTTAAGGATACGAATGACGAT
AATTTCCCCTGGTGATTGCAGGAAATAAATGACGTGGCGTTCAAAAGGAAGAACAAAAAT
ACCTTCGCCTAATTCAGGTCTGGGCGTACCTATATTATTGTTACTCAGAATCTGGAGAAC
GTCTGAAAGATGTTCCACATATCTGTCGGCTTGTGGTTCGCCGAAATGGTGATAGCTGTA
ATACCAGATGCCTTCTAAATCCTCATTGGCTTTTGGCATGAGTTTAATAATACGCAC

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9553.90 Da        Isoelectric Point: 5.2300

>ORF1686 TA_13 Antitoxin
MARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRDMLAEGL
SSGEAQPWEKDAFLRKVKAGIRK

Download         Length: 252 bp

>ORF1686 TA_13 Antitoxin
TTATTTCCTTATCCCTGCTTTCACCTTCCGTAAGAACGCGTCCTTTTCCCACGGCTGAGC
TTCACCACTACTCAACCCTTCTGCGAGCATGTCACGTAACGCTTGCAGGCGAGACTCTGC
TTGCTTTTCTCGAAGTAATCGCAGTGACTCACGGATCACTTCGCTTTGGGTGCGATAGTC
GCCGGATTCAATTAAGGACTCGATAAATTCACGCAACTCATCGCCGAGATCAACCGTCAT
CGTTCTGGCCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10079 Pseudoalteromonas rubra strain SCSIO 6842

34.066

92.857

0.316
T105 Mycobacterium tuberculosis H37Rv

31.522

93.878

0.296
T170 Vibrio cholerae O1 biovar El Tor str. N16961

28.421

90.476

0.276
T164 Vibrio cholerae O1 biovar El Tor str. N16961

28.421

90.476

0.276
T228 Caulobacter crescentus CB15

28.261

95.833

0.265
T169 Vibrio cholerae O1 biovar El Tor str. N16961

32.184

87.879

0.286
T233 Caulobacter crescentus CB15

29.885

78.378

0.265
T6129 Streptococcus mutans

18.627

91.071

0.194
T6128 Streptococcus mutans

18.627

91.071

0.194
Protein Organism Identities (%) Coverage (%) Ha-value
AT10079 Pseudoalteromonas rubra strain SCSIO 6842

61.039

89.535

0.566
AT169 Vibrio cholerae O1 biovar El Tor str. N16961

41.772

98.75

0.398
AT105 Mycobacterium tuberculosis H37Rv

37.975

95.181

0.361
AT228 Caulobacter crescentus CB15

36

85.227

0.325
AT233 Caulobacter crescentus CB15

36.667

72.289

0.265