TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Toxin (Protein)


Predicted family Hha (T10152) Predicted domain -
Locus tag orf3337 Length 72 a.a.
Coordinates 3543973..3544191 (+)

Antitoxin (Protein)


Predicted family TomB (AT10152) Predicted domain -
Locus tag orf3336 Length 124 a.a.
Coordinates 3543573..3543947 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf3334 3538662..3539855 + 1194 ORF3334 Predicted ORF by PRODIGAL Version 1.20 -
orf3335 3539878..3543027 + 3150 ORF3335 Predicted ORF by PRODIGAL Version 1.20 -
orf3336 3543573..3543947 + 375 ORF3336 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf3337 3543973..3544191 + 219 ORF3337 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf3338 3544363..3544914 + 552 ORF3338 Predicted ORF by PRODIGAL Version 1.20 -
orf3339 3545030..3545500 + 471 ORF3339 Predicted ORF by PRODIGAL Version 1.20 -
orf3340 3545664..3547214 + 1551 ORF3340 Predicted ORF by PRODIGAL Version 1.20 -
orf3341 3547256..3547609 - 354 ORF3341 Predicted ORF by PRODIGAL Version 1.20 -
orf3342 3547988..3548299 + 312 ORF3342 Predicted ORF by PRODIGAL Version 1.20 -
orf3343 3548330..3548902 - 573 ORF3343 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin


No domain identified.


Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 72 a.a.        Molecular weight: 8628.00 Da        Isoelectric Point: 8.9008

>ORF3337 TA_23 Toxin
MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLY
DKIPSSVWKFIR

Download         Length: 219 bp

>ORF3337 TA_23 Toxin
ATGTCCGAAAAACCTTTAACGAAAACCGATTATTTAATGCGTTTACGTCGTTGCCAGACA
ATTGACACGCTGGAGCGTGTTATCGAGAAAAATAAATACGAATTATCAGATAATGAACTG
GCGGTATTTTACTCAGCCGCAGATCACCGCCTCGCCGAATTGACCATGAATAAACTGTAC
GACAAGATCCCTTCCTCAGTATGGAAATTTATTCGCTAA

Antitoxin


Download         Length: 124 a.a.        Molecular weight: 14557.39 Da        Isoelectric Point: 4.7395

>ORF3336 TA_23 Antitoxin
MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAINLQLNELIEHIATFAL
NYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRKSGNRLFRCFVNATKENPA
SLSC

Download         Length: 375 bp

>ORF3336 TA_23 Antitoxin
ATGGATGAATACTCACCCAAAAGACATGATATCGCACAGCTTAAGTTTCTCTGTGAAACC
CTGTATCATGACTGCCTTGCAAACCTTGAAGAAAGCAATCATGGCTGGGTTAACGACCCA
ACCTCGGCGATCAACCTCCAGTTGAATGAACTGATTGAGCATATTGCGACCTTCGCACTT
AATTACAAAATTAAGTATAATGAAGACAATAAGCTCATTGAGCAGATCGACGAATATCTG
GATGACACCTTTATGTTGTTCAGTAGTTATGGTATTAATATGCAGGATCTTCAGAAATGG
CGGAAGTCAGGTAATCGACTATTCCGTTGTTTTGTCAATGCGACGAAAGAGAATCCTGCG
AGTTTATCTTGTTAG

Similar Proteins

Only experimentally validated proteins are listed.