TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type IV

Toxin (Protein)


Predicted family yeeV (T10128) Predicted domain CbtA_toxin (CbtA)
Locus tag orf49 Length 106 a.a.
Coordinates 49122..49442 (-)

Antitoxin (Protein)


Predicted family yeeU (AT1042) Predicted domain CbeA_antitoxin (CbeA)
Locus tag orf50 Length 121 a.a.
Coordinates 49476..49841 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf44 44799..45722 - 924 ORF44 Predicted ORF by PRODIGAL Version 1.20 -
orf45 45833..46867 - 1035 ORF45 Predicted ORF by PRODIGAL Version 1.20 -
orf46 47019..48227 + 1209 ORF46 Predicted ORF by PRODIGAL Version 1.20 -
orf47 48737..48883 - 147 ORF47 Predicted ORF by PRODIGAL Version 1.20 -
orf48 49001..49093 - 93 ORF48 Predicted ORF by PRODIGAL Version 1.20 -
orf49 49122..49442 - 321 ORF49 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf50 49476..49841 - 366 ORF50 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf51 49873..50094 - 222 ORF51 Predicted ORF by PRODIGAL Version 1.20 -
orf52 50103..50573 - 471 ORF52 Predicted ORF by PRODIGAL Version 1.20 -
orf53 50643..51464 - 822 ORF53 Predicted ORF by PRODIGAL Version 1.20 -
orf54 51536..52012 - 477 ORF54 Predicted ORF by PRODIGAL Version 1.20 -
orf55 52020..52217 - 198 ORF55 Predicted ORF by PRODIGAL Version 1.20 -
orf56 52229..53032 - 804 ORF56 Predicted ORF by PRODIGAL Version 1.20 -
orf57 53264..53563 + 300 ORF57 Predicted ORF by PRODIGAL Version 1.20 -
orf58 53560..54426 + 867 ORF58 Predicted ORF by PRODIGAL Version 1.20 -
orf59 54454..54747 - 294 ORF59 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin

CbtA_toxin (CbtA) (E-value: 2.8e-43, Score:144.5)

(3-104)

Antitoxin

CbeA_antitoxin (CbeA) (E-value: 1.2e-52, Score:174.7)

(2-100)


Sequences

Toxin        


Download         Length: 106 a.a.        Molecular weight: 12184.76 Da        Isoelectric Point: 5.5740

>ORF49 TA_1 Toxin
MNTPTVPATVTVSSRLSPVQVWQKLLTYILEHHYGLTINDTPFSNDTTIQEHIEAGVNLT
DAVNFLVERFELVRIDQKGFSWQDQEPWITSLDVRRAQFNLGLKRS

Download         Length: 321 bp

>ORF49 TA_1 Toxin
TTATGAGCGTTTCAAGCCAAGGTTGAACTGTGCACGACGAACATCCAAAGATGTTATCCA
GGGTTCTTGATCCTGCCAGGAGAAACCCTTCTGGTCAATGCGCACCAGCTCGAATCGTTC
CACAAGAAAATTAACAGCATCAGTAAGATTCACTCCAGCCTCTATATGTTCCTGAATCGT
CGTATCGTTACTGAACGGTGTGTCGTTGATCGTGAGGCCGTAATGATGCTCTAAAATATA
CGTTAATAGTTTTTGCCAAACTTGGACAGGAGACAGGCGTGACGAAACCGTCACCGTTGC
CGGTACAGTTGGAGTATTCAT

Antitoxin


Download         Length: 121 a.a.        Molecular weight: 13470.22 Da        Isoelectric Point: 6.8421

>ORF50 TA_1 Antitoxin
MQSTTLSGTSAENVSCLQWGLKRNITPCFGARLVQEGNRLYFLADRAGFNGSFSDDEALR
LDQAFPLMMKQLERMLTAGELDPRSQHCVTRHHNGLTCEADTLGSHGYVYIAIYPQSALT
R

Download         Length: 366 bp

>ORF50 TA_1 Antitoxin
TTATCTGGTTAGAGCTGACTGGGGATATATGGCAATGTAAACGTAGCCATGAGAGCCGAG
AGTGTCAGCTTCACAAGTAAGTCCGTTGTGATGCCGTGTGACGCAGTGCTGGCTGCGAGG
ATCAAGCTCGCCAGCCGTCAGCATCCGCTCAAGCTGTTTCATCATCAGTGGAAATGCCTG
GTCCAGACGCAAAGCTTCATCGTCACTGAATGAGCCATTAAATCCTGCCCGGTCAGCCAG
AAAGTATAGGCGGTTGCCTTCCTGTACCAGGCGAGCGCCGAAGCATGGCGTGATATTACG
TTTTAAACCCCACTGAAGGCAGGATACGTTCTCCGCCGATGTGCCGGATAAGGTGGTCGA
CTGCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10128 Erwinia amylovora strain CTBT3-1 tig00000000

68.932

97.17

0.67
T10199 Escherichia coli str. K-12 substr. MG1655

59.615

95.413

0.585
T10198 Escherichia coli str. K-12 substr. MG1655

61.165

91.15

0.594
T1042 Escherichia coli str. K-12 substr. MG1655

53

80.645

0.5
Protein Organism Identities (%) Coverage (%) Ha-value
AT1042 Escherichia coli str. K-12 substr. MG1655

62.185

97.541

0.612
AT10199 Escherichia coli str. K-12 substr. MG1655

65.979

92.381

0.529
AT10128 Erwinia amylovora strain CTBT3-1 tig00000000

66.327

91.589

0.537
AT10198 Escherichia coli str. K-12 substr. MG1655

66.667

91.429

0.529