TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type V

Toxin (Protein)


Predicted family ghoT (T6099) Predicted domain Toxin_GhoT_OrtT (ghoT)
Locus tag orf4091 Length 57 a.a.
Coordinates 4365771..4365944 (-)

Antitoxin (Protein)


Predicted family ghoS (AT6099) Predicted domain GhoS
Locus tag orf4092 Length 98 a.a.
Coordinates 4365972..4366268 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf4089 4362441..4363898 + 1458 ORF4089 Predicted ORF by PRODIGAL Version 1.20 -
orf4090 4364135..4365652 + 1518 ORF4090 Predicted ORF by PRODIGAL Version 1.20 -
orf4091 4365771..4365944 - 174 ORF4091 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf4092 4365972..4366268 - 297 ORF4092 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf4093 4366495..4366767 - 273 ORF4093 Predicted ORF by PRODIGAL Version 1.20 -
orf4094 4366779..4367009 - 231 ORF4094 Predicted ORF by PRODIGAL Version 1.20 -
orf4095 4367190..4368821 + 1632 ORF4095 Predicted ORF by PRODIGAL Version 1.20 -
orf4096 4368818..4369537 + 720 ORF4096 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Toxin

Toxin_GhoT_OrtT (ghoT) (E-value: 2e-26, Score:90)

(1-55)

Antitoxin

GhoS (E-value: 2.6e-40, Score:134.3)

(2-91)


Sequences

Toxin        


Download         Length: 57 a.a.        Molecular weight: 6555.06 Da        Isoelectric Point: 10.2288

>ORF4091 TA_30 Toxin
MALFSKILIFYVIGVNISFVIIWFISHEKTHIRLLSAFLVGITWPMSLPVALLFSLF

Download         Length: 174 bp

>ORF4091 TA_30 Toxin
CTAAAAGAGAGAAAAAAGTAATGCCACAGGCAGACTCATTGGCCAGGTTATTCCGACCAG
GAATGCACTAAGTAAACGAATATGTGTTTTCTCATGTGAGATAAACCAGATAATGACAAA
GGATATGTTCACACCAATCACATAAAAAATTAATATTTTAGAGAATAGTGCCAT

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 11467.97 Da        Isoelectric Point: 4.1705

>ORF4092 TA_30 Antitoxin
MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTS
LAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK

Download         Length: 297 bp

>ORF4092 TA_30 Antitoxin
CTACTTGTAAAACTGACGGAAATAGTCATCAACTGTCATAATGTTGAGGTCAAAATCAAT
ATCCGGTAAGTCTAAGCATTTAAGCCTGATTAAATCTTCGATTTCACTTGCGGCTAACGA
TGTCGTTATTGCGAAGGAGTTTTCATTCAATTGTCGTGGTATCCCATATTCATCAGCCAC
GATAGAGGAGAAATTCATATCATACATCAATGATCTTAACCTTAAGAACACTGAGGAATA
AGATGATGGATAATCAAAAGAAACAACATAAGTATTGAACTTGTTTTTACCTTCCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T6099 Escherichia coli str. K-12 substr. MG1655

100

100

1
Protein Organism Identities (%) Coverage (%) Ha-value
AT6099 Escherichia coli str. K-12 substr. MG1655

100

100

1