NC_0009131631002..1664463

MGE detailed information

MGE type: Prophage        MGE length: 33462 bp
Accession: NC_000913        Location: 1631002..1664463         Organism: Escherichia coli str. K-12 substr. MG1655       Replicon: chromosome


Gene structure

The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
b1539 1627517..1628263 + 747 NP_416057.1 3-hydroxy acid dehydrogenase YdfG -
b1540 1628352..1629038 + 687 NP_416058.1 DNA-binding transcriptional repressor RspR -
b1541 1629215..1629418 + 204 NP_416059.1 putative selenoprotein YdfZ -
b1542 1629453..1630913 - 1461 NP_416060.1 putative oxidoreductase YdfI -
b1543 1631002..1632285 - 1284 YP_009518786.1 putative transporter YdfJ -
b4748 1632890..1633003 + 114 YP_009518787.1 protein YnfT -
b1544 1633072..1633305 + 234 NP_416062.2 cold shock protein YdfK -
b1545 1633622..1634212 + 591 NP_416063.1 Tn3 family transposase TnpR_ISSba14 Transposase
b1546 1634310..1634885 - 576 NP_416064.1 putative tail fiber assembly protein TfaQ -
b1547 1634885..1635847 - 963 NP_416065.1 putative prophage side tail fiber protein StfQ -
b1548 1635798..1636367 - 570 YP_009518788.1 putative prophage DNA-packaging protein NohA -
b4533 1636756..1636989 + 234 YP_588454.1 DUF3950 domain-containing protein YnfO -
b1549 1637047..1637457 + 411 NP_416067.2 DUF1398 domain-containing protein YdfO -
b1550 1637609..1637782 - 174 NP_416068.2 protein GnsB -
b1551 1637954..1638109 - 156 NP_416069.2 protein YnfN -
b4749 1638188..1638253 - 66 YP_009518789.1 protein YnfR -
b4724 1638256..1638444 - 189 YP_009518790.1 protein YnfQ -
b1552 1638455..1638667 - 213 NP_416070.1 cold shock-like protein CspI -
b1553 1639030..1639527 - 498 NP_416071.1 DUF2514 domain-containing protein RzpQ -
b4689 1639080..1639334 - 255 YP_002791241.1 putative lipoprotein RzoQ -
b1554 1639524..1640057 - 534 NP_416072.1 putative lysozyme -
b1555 1640054..1640365 - 312 NP_416073.1 protein YdfR -
b1556 1640370..1640585 - 216 NP_416074.4 putative prophage lysis protein EssQ -
b4776 1640805..1640975 + 171 YP_010051186.1 putative zinc-binding protein YnfU -
b1557 1641339..1641554 - 216 NP_416075.1 cold shock-like protein CspB -
b1558 1641855..1642067 + 213 NP_416076.1 cold shock-like protein CspF -
b4750 1642122..1642211 + 90 YP_009518791.1 protein YnfS -
b1559 1642489..1643241 - 753 NP_416077.4 putative antitermination protein Q -
b1560 1643255..1644304 - 1050 NP_416078.4 protein YdfU -
b1561 1644651..1644902 - 252 NP_416079.1 protein Rem -
b1562 1645119..1645274 - 156 NP_416080.1 toxic protein HokD -
b1563 1645346..1645633 - 288 NP_416081.1 mRNA interferase toxin RelE Toxin Detail
b1564 1645633..1645872 - 240 NP_416082.1 antitoxin/DNA-binding transcriptional repressor RelB Antitoxin Detail
b1565 1645897..1646202 + 306 NP_416083.1 protein YdfV -
b1566 1646405..1646737 + 333 NP_416084.1 PF14282 family protein FlxA -
b1567 1647174..1647323 - 150 YP_009518792.1 protein YdfW -
b1568 1647346..1647636 - 291 YP_009518793.1 protein YdfX -
b1569 1647620..1647850 - 231 NP_416087.1 putative DNA-binding transcriptional regulator DicC -
b1570 1647934..1648341 + 408 NP_416088.1 DNA-binding transcriptional dual regulator DicA -
b1571 1648508..1648663 + 156 NP_416089.1 DUF1391 domain-containing protein YdfA -
b1572 1648665..1648793 + 129 NP_416090.2 uncharacterized protein YdfB -
b1573 1648823..1649041 + 219 NP_416091.1 uncharacterized protein YdfC -
b1575 1649609..1649797 + 189 NP_416092.1 cell division inhibition protein DicB -
b1576 1649794..1649985 + 192 NP_416093.1 lysis protein -
b4534 1652728..1652838 - 111 YP_009518794.1 protein YnfP -
b1580 1652896..1653915 - 1020 NP_416097.1 putative zinc-binding dehydrogenase RspB -
b1581 1653927..1655141 - 1215 NP_416098.1 mandelate racemase/muconate lactonizing enzyme family protein RspA -
b1582 1655347..1655673 - 327 NP_416099.1 putative transporter YnfA -
b1583 1655808..1656149 + 342 NP_416100.1 DUF1283 domain-containing protein YnfB -
b1584 1656184..1656744 + 561 NP_416101.1 spermidine N-acetyltransferase -
b1585 1656747..1657457 - 711 NP_416102.2 PF06788 family lipoprotein YnfC -
b1586 1657565..1657870 + 306 NP_416103.2 DUF1161 domain-containing protein YnfD -
b1587 1658069..1660495 + 2427 NP_416104.1 putative selenate reductase YnfE -
b1588 1660556..1662979 + 2424 NP_416105.4 putative selenate reductase YnfF -
b1589 1662990..1663607 + 618 NP_416106.1 putative oxidoreductase YnfG -
b1590 1663609..1664463 + 855 NP_416107.1 putative menaquinol dehydrogenase -
b1591 1664506..1665120 + 615 NP_416108.2 redox enzyme maturation protein DmsD -
b1592 1665315..1666571 + 1257 NP_416109.2 putative chloride:H(+) antiporter ClcB -
b1593 1666524..1667219 - 696 NP_416110.4 dethiobiotin synthetase BidA -
b1594 1667344..1668564 - 1221 NP_416111.1 DNA-binding transcriptional repressor Mlc -

Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Prophage TA20067 HG738867 1519531..1552992 0
Escherichia coli BW2952 Prophage TA23854 NC_012759 1521085..1554546 0
Escherichia coli BW25113 Prophage TA48683 NZ_CP009273 1625259..1658720 0
Escherichia coli str. K-12 substr. MC4100 Prophage TA20067 HG738867 1519531..1552992 0
Escherichia coli str. K-12 substr. DH10B Prophage TA22686 NC_010473 1718651..1753448 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Prophage TA285017 NZ_HG738867 1519531..1552992 0
Escherichia coli DH1 Prophage TA27170 NC_017625 2221734..2249263 0.009
Escherichia coli strain WP2-S18-ESBL-08 Prophage TA33893 NZ_AP021946 2451962..2495155 0.008
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52469 NZ_CP010439 2371482..2397224 0.008
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52548 NZ_CP010441 2374573..2408034 0
Escherichia coli strain RR1 Prophage TA53405 NZ_CP011113 1593305..1621509 0.007
Escherichia coli strain USML2 Prophage TA53503 NZ_CP011124 3209613..3249971 0.004
Escherichia coli strain DH1Ec169 Prophage TA55926 NZ_CP012127 1610572..1644033 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA57308 NZ_CP012868 2977202..3010663 0
Escherichia coli strain K-12 substr. MG1655_TMP32XR1 Prophage TA57339 NZ_CP012869 2977209..3010670 0
Escherichia coli strain K-12 substr. MG1655_TMP32XR2 Prophage TA57370 NZ_CP012870 2977209..3010670 0
Escherichia coli strain HST04 Prophage TA59671 NZ_CP013952 4226718..4253586 0.006
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA60414 NZ_CP014225 4469926..4503387 0
Escherichia coli str. K-12 substr. MG1655 strain JW5437-1 Prophage TA60779 NZ_CP014348 3669648..3710006 0.004
Escherichia coli strain tolC- Prophage TA70553 NZ_CP018801 2221021..2255818 0
Escherichia coli strain MGY Prophage TA73076 NZ_CP019629 1631002..1664463 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA89996 NZ_CP025268 1635821..1669281 0
Escherichia coli strain 9FA Prophage TA93861 NZ_CP026342 1631002..1657870 0.006
Escherichia coli strain 9A Prophage TA93904 NZ_CP026343 1631001..1664462 0
Escherichia coli strain 8FA Prophage TA93947 NZ_CP026344 1631002..1664463 0
Escherichia coli strain 8A Prophage TA93990 NZ_CP026345 1629453..1657870 0.008
Escherichia coli strain 7FA Prophage TA94033 NZ_CP026346 1631002..1657870 0.006
Escherichia coli strain 7A Prophage TA94076 NZ_CP026347 1631002..1664463 0
Escherichia coli strain 6FA Prophage TA94119 NZ_CP026348 1631002..1664463 0
Escherichia coli strain 6A Prophage TA94162 NZ_CP026349 1631002..1664463 0
Escherichia coli strain 5FA Prophage TA94205 NZ_CP026350 1631002..1664463 0
Escherichia coli strain 5A Prophage TA94248 NZ_CP026351 1631002..1657870 0.006
Escherichia coli strain 4FA Prophage TA94291 NZ_CP026352 1631002..1657870 0.006
Escherichia coli strain 3FA Prophage TA94377 NZ_CP026354 1629215..1656744 0.009
Escherichia coli strain 3A Prophage TA94420 NZ_CP026355 1631002..1664463 0
Escherichia coli strain 2FA Prophage TA94463 NZ_CP026356 1631002..1664463 0
Escherichia coli strain 2F_0 Prophage TA94506 NZ_CP026357 1631002..1664463 0
Escherichia coli strain 2A Prophage TA94549 NZ_CP026358 1631002..1657870 0.006
Escherichia coli strain 2_0 Prophage TA94592 NZ_CP026359 1631002..1664463 0
Escherichia coli strain 1FA Prophage TA94635 NZ_CP026360 1631002..1664463 0
Escherichia coli strain 1A Prophage TA94678 NZ_CP026361 1631002..1664463 0
Escherichia coli strain CJ236 Prophage TA105250 NZ_CP029238 1631002..1664463 0
Escherichia coli strain ER1709 Prophage TA107391 NZ_CP030240 3759929..3794723 0
Escherichia coli strain C600 Prophage TA108583 NZ_CP031214 2258054..2298412 0.004
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA112075 NZ_CP032667 2218134..2258492 0.004
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA112107 NZ_CP032679 1631007..1664468 0
Escherichia coli strain WCHEC035053S1G0 Prophage TA116275 NZ_CP034595 2080640..2114101 0
Escherichia coli BW25113 strain AM187 Prophage TA120213 NZ_CP037857 1624921..1658382 0
Escherichia coli strain BE104 Prophage TA126265 NZ_CP040643 1764966..1798427 0
Escherichia coli strain EK2009 Prophage TA126352 NZ_CP040663 1619919..1653380 0
Escherichia coli strain S17-1 Prophage TA126454 NZ_CP040667 1751269..1784730 0
Escherichia coli strain JME67 Prophage TA136091 NZ_CP042843 2340491..2373952 0
Escherichia coli strain JME65 Prophage TA136177 NZ_CP042845 2335378..2368839 0
Escherichia coli strain JME64 Prophage TA136220 NZ_CP042846 2330497..2363958 0
Escherichia coli strain ATCC BAA-196 Prophage TA136307 NZ_CP042865 2229091..2255959 0.006
Escherichia coli strain ATCC BAA-196 Prophage TA136338 NZ_CP042867 2228999..2255867 0.006
Escherichia coli O16:H48 strain PG20180172 Prophage TA137410 NZ_CP043183 2220212..2253673 0
Escherichia coli O16:H48 strain PG20180171 Prophage TA137428 NZ_CP043185 360597..386339 0.008
Escherichia coli O16:H48 strain PG20180170 Prophage TA137478 NZ_CP043187 2220208..2253669 0
Escherichia coli O16:H48 strain PG20180175 Prophage TA137509 NZ_CP043189 2220211..2253672 0
Escherichia coli O16:H48 strain PG20180173 Prophage TA137541 NZ_CP043191 2220211..2253672 0
Escherichia coli O16:H48 strain PG20180063 Prophage TA137571 NZ_CP043193 2226806..2253674 0.007
Escherichia coli O16:H48 strain PG20180062 Prophage TA137602 NZ_CP043195 2508272..2548630 0.004
Escherichia coli O16:H48 strain PG20180061 Prophage TA137642 NZ_CP043197 4199959..4240317 0.005
Escherichia coli O16:H48 strain PG20180059 Prophage TA137711 NZ_CP043201 2220211..2253672 0
Escherichia coli O16:H48 strain PG20180058 Prophage TA137744 NZ_CP043203 2220211..2253672 0
Escherichia coli O16:H48 strain PG20180054 Prophage TA137777 NZ_CP043205 2227930..2253672 0.008
Escherichia coli O16:H48 strain PG20180053 Prophage TA137810 NZ_CP043207 2220211..2253672 0
Escherichia coli O16:H48 strain PG20180052 Prophage TA137843 NZ_CP043209 2220211..2253672 0
Escherichia coli strain DH5alpha Prophage TA142456 NZ_CP045741 3271084..3299468 0.01
Escherichia coli K-12 Prophage TA145467 NZ_CP047127 4091062..4119454 0.01
Escherichia coli strain LD27-1 Prophage TA146827 NZ_CP047594 2235900..2267399 0.008
Escherichia coli strain Dam/Dcm Prophage TA157065 NZ_CP053603 1615047..1641915 0.006
Escherichia coli strain IGC_EcoliInv_1.1 Prophage TA160046 NZ_CP054665 1635819..1661561 0.008
Escherichia coli strain AML001_ev03 Prophage TA173646 NZ_CP062239 1625259..1658720 0
Escherichia coli strain AML001_ev02 Prophage TA173689 NZ_CP062240 1622609..1651001 0.01
Escherichia coli strain AML001_ev01 Prophage TA173732 NZ_CP062241 1625259..1658720 0
Escherichia coli strain AML001_par Prophage TA173775 NZ_CP062242 1625259..1652127 0.006
Escherichia coli strain AML003_ev03 Prophage TA173818 NZ_CP062243 1625259..1658720 0
Escherichia coli strain AML003_ev02 Prophage TA173861 NZ_CP062244 1625259..1658720 0
Escherichia coli strain AML003_ev01 Prophage TA173904 NZ_CP062245 1625258..1658719 0
Escherichia coli strain AML003_par Prophage TA173947 NZ_CP062246 1625259..1658720 0
Escherichia coli strain AML002_ev02 Prophage TA174033 NZ_CP062248 1625260..1652128 0.006
Escherichia coli strain AML002_par Prophage TA174119 NZ_CP062250 1625259..1658720 0
Escherichia coli K-12 strain CETR3G40 Prophage TA181427 NZ_CP064678 1625259..1658720 0
Escherichia coli K-12 strain CETR2G40 Prophage TA181470 NZ_CP064679 1625259..1652127 0.006
Escherichia coli K-12 strain CETR1G40 Prophage TA181513 NZ_CP064680 1625257..1658718 0
Escherichia coli K-12 strain BZKR3G40 Prophage TA181556 NZ_CP064681 1625259..1652127 0.006
Escherichia coli K-12 strain BZKR2G40 Prophage TA181599 NZ_CP064682 1625259..1658720 0
Escherichia coli strain CV601 Prophage TA186401 NZ_CP067994 2221463..2254924 0
Escherichia coli strain CY706 Prophage TA187058 NZ_CP068281 2874303..2909100 0
Escherichia coli BW25113 substr. CHXR1G20 Prophage TA189919 NZ_CP069132 1625255..1658716 0
Escherichia coli BW25113 substr. CHXR2G20 Prophage TA189962 NZ_CP069133 1625259..1658720 0
Escherichia coli strain XH1815 Prophage TA190295 NZ_CP069386 261320..294781 0
Escherichia coli strain K-12 J53 Prophage TA194816 NZ_CP070962 1907593..1935799 0.007
Escherichia coli strain 11202 Prophage TA196524 NZ_CP071521 2215898..2254488 0.004
Escherichia coli strain K1508 Prophage TA197259 NZ_CP072054 1519531..1552992 0
Escherichia coli strain CPE35 Prophage TA204324 NZ_CP075722 2222554..2259693 0.008
Escherichia coli strain Stbl4 Prophage TA204590 NZ_CP076043 1160875..1190368 0.004
Escherichia coli strain DH5a Prophage TA205746 NZ_CP076470 4079180..4114005 0
Escherichia coli strain JM83 Prophage TA208757 NZ_CP077969 1549815..1583276 0
Escherichia coli strain SF10 Prophage TA209975 NZ_CP079767 1067917..1100181 0.009
Escherichia coli strain KMS2005 Prophage TA210463 NZ_CP079991 2485629..2519090 0
Escherichia coli strain KMS2001 Prophage TA210495 NZ_CP079992 2485630..2519091 0
Escherichia coli strain EV36 Prophage TA210527 NZ_CP079993 2485630..2519091 0
Escherichia coli strain RP437 Prophage TA216371 NZ_CP083410 1630999..1664460 0
Escherichia coli strain EC2648-R1-1 Prophage TA218255 NZ_CP084207 3031857..3059386 0.009
Escherichia coli strain EC2648-R2 Prophage TA218286 NZ_CP084209 2222730..2250021 0.009
Escherichia coli strain gb37 Prophage TA219999 NZ_CP084897 1634347..1660089 0.008
Escherichia coli strain JW5503 Prophage TA224831 NZ_CP087136 1625806..1652674 0.006
Escherichia coli strain MG1655-377GD Prophage TA235511 NZ_CP092037 1454974..1491108 0.008
Escherichia coli strain S-P-C-029.01 Prophage TA236980 NZ_CP092702 1631002..1657870 0.006
Escherichia coli strain ER2683 Prophage TA237841 NZ_CP093221 3343923..3370791 0.006
Escherichia coli strain EV36 mutant 1a Prophage TA238251 NZ_CP093368 2485630..2512498 0.006
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA246421 NZ_CP097881 2218488..2258846 0.004
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA246447 NZ_CP097882 2211254..2239646 0.01
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA246473 NZ_CP097883 2211254..2239646 0.01
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA246500 NZ_CP097884 2828985..2869343 0.004
Escherichia coli strain WG1 Prophage TA249176 NZ_CP099590 2213004..2249588 0.001
Escherichia coli strain WG1 Prophage TA249176 NZ_CP099590 2219597..2250451 0.009
Escherichia coli strain BM28 lysU Prophage TA253541 NZ_CP102379 1503513..1538240 0.001
Escherichia coli strain BM28 Prophage TA253575 NZ_CP102380 1503513..1538240 0.001
Escherichia coli strain THB42-F1 Prophage TA257599 NZ_CP104326 2221107..2254568 0
Escherichia coli strain SY22A6 Prophage TA260129 NZ_CP106994 2226870..2268564 0.005
Escherichia coli strain SY22B3 Prophage TA260152 NZ_CP106995 2226870..2268564 0.005
Escherichia coli strain SY22D8 Prophage TA260175 NZ_CP106996 2226870..2268564 0.005
Escherichia coli strain SY22B6 Prophage TA260198 NZ_CP106997 2226870..2268564 0.005
Escherichia coli strain SY221 Prophage TA260221 NZ_CP106998 2226870..2268564 0.005
Escherichia coli strain SY22A4 Prophage TA260244 NZ_CP106999 2226870..2268564 0.005
Escherichia coli strain SY22B2 Prophage TA260267 NZ_CP107000 2226870..2268564 0.005
Escherichia coli strain SY22B5 Prophage TA260290 NZ_CP107001 2226870..2268564 0.005
Escherichia coli strain SY22C3 Prophage TA260313 NZ_CP107002 2226870..2268564 0.005
Escherichia coli strain SY22B1 Prophage TA260336 NZ_CP107003 2226870..2268564 0.005
Escherichia coli strain SY22A3 Prophage TA260359 NZ_CP107004 2226870..2268564 0.005
Escherichia coli strain SY22A1 Prophage TA260382 NZ_CP107005 2226870..2268564 0.005
Escherichia coli strain HE_100-10 Prophage TA262641 NZ_CP110014 1718639..1753436 0
Escherichia coli strain HE_150 Prophage TA262667 NZ_CP110015 1718642..1753439 0
Escherichia coli strain HE_100 Prophage TA262693 NZ_CP110016 1718643..1753440 0
Escherichia coli strain HE_50 Prophage TA262719 NZ_CP110017 1718642..1753439 0
Escherichia coli strain DH10B Prophage TA262745 NZ_CP110018 1718651..1753448 0
Escherichia coli strain J53-p133 Prophage TA264727 NZ_CP110999 2077964..2118322 0.004
Escherichia coli strain J53-p131 Prophage TA264756 NZ_CP111004 2077964..2118322 0.005
Escherichia coli strain J53-p130 Prophage TA264784 NZ_CP111008 2077738..2111199 0
Escherichia coli strain CM2 Prophage TA266905 NZ_CP114891 1702179..1739626 0.002
Escherichia coli strain CM5 Prophage TA266920 NZ_CP114892 849012..883809 0
Escherichia coli strain CM13 Prophage TA266961 NZ_CP114893 3451022..3485819 0
Escherichia coli strain B-1109 Prophage TA272600 NZ_CP117971 2577962..2618799 0.008
Escherichia coli strain HT-946 Prophage TA276667 NZ_CP122316 1216837..1250298 0
Escherichia coli strain HT873X1 Prophage TA276729 NZ_CP122318 1250251..1283712 0
Escherichia coli strain TG1 Prophage TA284417 NZ_CP128218 1253353..1288790 0.002
Escherichia coli strain K-12 substr. RV308 Prophage TA285435 NZ_LM995446 1579899..1613360 0
Escherichia coli K-12 substr. AG100 Prophage TA285657 NZ_LN832404 1634656..1668117 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA289514 NZ_LR881938 1615271..1648732 0
Escherichia coli isolate 2015-01-466 Prophage TA289589 NZ_LR882052 2200582..2239192 0.006
Escherichia coli isolate 106 Prophage TA293343 NZ_LT615377 1634656..1668117 0
Escherichia coli isolate 103 Prophage TA293374 NZ_LT615378 1634656..1661524 0.007
Escherichia coli isolate 103 Prophage TA293374 NZ_LT615378 1634656..1668117 0
Escherichia coli str. K-12 substr. DH10B Prophage TA22686 NC_010473 1718651..1753448 0
Escherichia coli BW2952 Prophage TA23854 NC_012759 1521085..1554546 0
Escherichia coli BW25113 Prophage TA48683 NZ_CP009273 1625259..1658720 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Prophage TA285017 NZ_HG738867 1519531..1552992 0