MGE detailed information
MGE type: Prophage MGE length: 38305 bp
Accession: UFRD01000002 Location: 813036..851340 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 Replicon: chromosome
Accession: UFRD01000002 Location: 813036..851340 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NCTC12023_00973 | 809309..809950 | + | 642 | SUH96410.1 | KHG/KDPG aldolase | - |
| NCTC12023_00974 | 810050..811228 | - | 1179 | SUH96411.1 | phosphoribosylglycinamide formyltransferase 2 | - |
| NCTC12023_00975 | 811359..811649 | + | 291 | SUH96412.1 | DNA damage-inducible gene in SOS regulon-dependent on cyclic AMP and H-NS | - |
| NCTC12023_00976 | 811717..812070 | + | 354 | SUH96413.1 | protein YebF | - |
| NCTC12023_00977 | 812164..812823 | + | 660 | SUH96414.1 | inner membrane protein YebE | - |
| NCTC12023_00978 | 813036..815087 | + | 2052 | SUH96415.1 | oligopeptidase | - |
| NCTC12023_00979 | 815122..815820 | - | 699 | SUH96416.1 | exodeoxyribonuclease X | - |
| NCTC12023_00980 | 815844..816500 | - | 657 | SUH96417.1 | Putative amido hydrolase | - |
| NCTC12023_00981 | 816608..816838 | - | 231 | SUH96418.1 | DNA polymerase III subunit theta | - |
| NCTC12023_00982 | 816976..817350 | + | 375 | SUH96419.1 | Copper resistance protein CopC | - |
| NCTC12023_00983 | 817351..818226 | + | 876 | SUH96420.1 | membrane protein | - |
| NCTC12023_00984 | 818243..818596 | + | 354 | SUH96421.1 | Protein of uncharacterised function (DUF2511) | - |
| - | 818696..818841 | - | 146 | - | - | Antitoxin Detail |
| - | 818736..818839 | + | 104 | - | - | Toxin Detail |
| NCTC12023_00987 | 818970..819824 | - | 855 | SUH96422.1 | hypothetical protein ; Integrase | Integrase |
| NCTC12023_00988 | 819884..820537 | - | 654 | SUH96423.1 | Rac prophage protein | - |
| NCTC12023_00989 | 820568..820798 | + | 231 | SUH96424.1 | lytic enzyme | - |
| NCTC12023_00990 | 820852..821385 | + | 534 | SUH96425.1 | exported phage protein | - |
| NCTC12023_00991 | 821641..821808 | - | 168 | SUH96426.1 | lytic enzyme | - |
| NCTC12023_00992 | 822116..822379 | + | 264 | SUH96427.1 | DNA breaking-rejoining protein | - |
| NCTC12023_00994 | 824225..824383 | - | 159 | SUH96428.1 | Uncharacterised protein | - |
| NCTC12023_00995 | 824983..825105 | + | 123 | SUH96429.1 | Uncharacterised protein | - |
| NCTC12023_00996 | 825554..826168 | - | 615 | SUH96430.1 | disulfide bond formation protein | - |
| NCTC12023_00997 | 826178..826336 | - | 159 | SUH96431.1 | membrane protein | - |
| NCTC12023_00998 | 826504..827259 | - | 756 | SUH96432.1 | drug/metabolite transporter DMT permease | - |
| NCTC12023_00999 | 828685..829053 | - | 369 | SUH96433.1 | hypothetical protein ; Integrase | Integrase |
| NCTC12023_01000 | 829177..830034 | + | 858 | SUH96434.1 | IS256 family transposase IS285 | Transposase |
| NCTC12023_01001 | 830034..830180 | + | 147 | SUH96435.1 | IS256 family transposase ISEc39 | Transposase |
| NCTC12023_01002 | 831462..831881 | + | 420 | SUH96436.1 | acetyltransferase | - |
| NCTC12023_01003 | 832269..832745 | - | 477 | SUH96437.1 | Uncharacterised protein | - |
| NCTC12023_01004 | 833075..833470 | - | 396 | SUH96438.1 | protein ycgX | - |
| NCTC12023_01005 | 834154..834876 | + | 723 | SUH96439.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NCTC12023_01006 | 835161..835325 | + | 165 | SUH96440.1 | membrane protein | - |
| NCTC12023_01007 | 835298..835531 | + | 234 | SUH96441.1 | Uncharacterised protein | - |
| NCTC12023_01008 | 835549..836199 | + | 651 | SUH96442.1 | Serine/threonine-protein phosphatase 1 | - |
| NCTC12023_01009 | 836218..836409 | - | 192 | SUH96443.1 | putative secreted protein | - |
| NCTC12023_01010 | 836519..836758 | - | 240 | SUH96444.1 | conserved domain protein | - |
| NCTC12023_01011 | 836873..838414 | - | 1542 | SUH96445.1 | rRNA (cytosine-C(5)-)-methyltransferase RsmF | - |
| NCTC12023_01012 | 838390..841023 | - | 2634 | SUH96446.1 | Intermembrane transport protein YebT | VF |
| NCTC12023_01013 | 840992..842275 | - | 1284 | SUH96447.1 | Paraquat-inducible protein A | - |
| NCTC12023_01014 | 842332..842901 | + | 570 | SUH96448.1 | GAF domain-containing protein | - |
| NCTC12023_01015 | 842999..843685 | + | 687 | SUH96449.1 | ProP effector | - |
| NCTC12023_01016 | 843705..845753 | + | 2049 | SUH96450.1 | Tail-specific protease precursor | - |
| NCTC12023_01017 | 845947..846828 | + | 882 | SUH96451.1 | heat shock protein | - |
| NCTC12023_01018 | 846876..848249 | - | 1374 | SUH96452.1 | export protein | - |
| NCTC12023_01019 | 848314..848421 | + | 108 | SUH96453.1 | Uncharacterised protein | - |
| NCTC12023_01020 | 848425..849216 | + | 792 | SUH96454.1 | transcriptional regulator KdgR | - |
| NCTC12023_01021 | 849428..849667 | - | 240 | SUH96455.1 | putative exported protein | - |
| NCTC12023_01022 | 849825..849968 | + | 144 | SUH96456.1 | Putative inner membrane protein | - |
| NCTC12023_01023 | 850039..850326 | + | 288 | SUH96457.1 | putative exported protein | - |
| NCTC12023_01025 | 851560..853305 | + | 1746 | SUH96458.1 | penicillin-binding protein | - |
| NCTC12023_01026 | 853371..854180 | + | 810 | SUH96459.1 | 23S rRNA methyltransferase A | - |
| NCTC12023_01027 | 854177..854743 | - | 567 | SUH96460.1 | membrane protein YebN | - |
| NCTC12023_01028 | 855153..855611 | - | 459 | SUH96461.1 | membrane protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.006 | |
| Salmonella enterica serovar Typhimurium | Prophage | TA26033 | NC_016854 | 1928777..1959044 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 | Prophage | TA26076 | NC_016863 | 1895143..1935129 | 0.001 | |
| Salmonella enterica subsp. enterica serovar Heidelberg str. | Prophage | TA29796 | NC_021812 | 2424901..2455569 | 0.009 | |
| Salmonella enterica subsp. enterica serovar 4,5,12:i:- str. | Prophage | TA29825 | NC_021820 | 3183590..3238108 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 | Prophage | TA30165 | NC_022544 | 1885289..1923607 | 0 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3835 | Prophage | TA37175 | NZ_AP023288 | 2135223..2173540 | 0 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3837 | Prophage | TA37199 | NZ_AP023289 | 2201777..2241771 | 0.001 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3844 | Prophage | TA37223 | NZ_AP023290 | 2096593..2136587 | 0.001 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain L-4126 | Prophage | TA37247 | NZ_AP023291 | 2108556..2136556 | 0.008 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4233 | Prophage | TA37271 | NZ_AP023292 | 2082074..2120390 | 0 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4261 | Prophage | TA37295 | NZ_AP023294 | 2081358..2119674 | 0 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4445 | Prophage | TA37344 | NZ_AP023300 | 2065261..2119785 | 0.009 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4526 | Prophage | TA37375 | NZ_AP023303 | 2122962..2177487 | 0.009 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4567 | Prophage | TA37421 | NZ_AP023306 | 2065259..2119783 | 0.009 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4578 | Prophage | TA37454 | NZ_AP023309 | 2054059..2092375 | 0 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4605 | Prophage | TA37503 | NZ_AP023313 | 2073537..2111853 | 0 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4614 | Prophage | TA37532 | NZ_AP023315 | 2081441..2119757 | 0 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4681 | Prophage | TA37557 | NZ_AP023317 | 2106458..2159112 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216 | Prophage | TA146337 | NZ_CP047522 | 2819709..2859703 | 0.001 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10640 | Prophage | TA146417 | NZ_CP047529 | 2832708..2887233 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10484 | Prophage | TA146438 | NZ_CP047531 | 2126538..2166532 | 0.001 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10359 | Prophage | TA146518 | NZ_CP047540 | 2096291..2151592 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10250 | Prophage | TA146568 | NZ_CP047544 | 2152982..2207507 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10057 | Prophage | TA146643 | NZ_CP047550 | 2140221..2168797 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10231 | Prophage | TA146672 | NZ_CP047553 | 2819492..2874017 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10112 | Prophage | TA146703 | NZ_CP047555 | 3988931..4028925 | 0.001 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625 | Prophage | TA185716 | NZ_CP067091 | 1935468..1971691 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 | Prophage | TA186245 | NZ_CP067397 | 1936204..1974513 | 0 | |
| Salmonella enterica strain 1722 | Prophage | TA186441 | NZ_CP068018 | 2602225..2656750 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP16345 | Prophage | TA187605 | NZ_CP068696 | 2576270..2616256 | 0.001 | |
| Salmonella enterica strain GSJ/2016-Sal-016 | Prophage | TA190273 | NZ_CP069381 | 1995955..2034279 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SO_8752_Stm | Prophage | TA201368 | NZ_CP074092 | 1935544..1973853 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain A_cip | Prophage | TA201393 | NZ_CP074094 | 1935698..1974007 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain 2B_cip | Prophage | TA201417 | NZ_CP074096 | 1935712..1975698 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain C_cip | Prophage | TA201441 | NZ_CP074098 | 1935763..1974080 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN008081 | Prophage | TA202570 | NZ_CP074663 | 2095146..2149656 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Stanleyville strain CFSAN059881 | Prophage | TA202976 | NZ_CP075116 | 1986011..2024534 | 0.004 | |
| Salmonella enterica strain CFSAN033950 | Prophage | TA203276 | NZ_CP075141 | 1962917..2017434 | 0.009 | |
| Salmonella enterica subsp. enterica strain CFSAN058565 | Prophage | TA207586 | NZ_CP077704 | 2054322..2092246 | 0.008 | |
| Salmonella enterica strain sg1722-1 | Prophage | TA212651 | NZ_CP081187 | 2079863..2134388 | 0.009 | |
| Salmonella enterica strain sg1722-2 | Prophage | TA212675 | NZ_CP081189 | 2057993..2085993 | 0.008 | |
| Salmonella enterica subsp. enterica serovar London isolate N18-04674 | Prophage | TA215634 | NZ_CP082929 | 1973385..2012286 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Saintpaul strain S25 | Prophage | TA221070 | NZ_CP085696 | 2002388..2042389 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain Blastoise | Prophage | TA221971 | NZ_CP085819 | 4011205..4049513 | 0 | |
| Salmonella enterica strain SZL 31 | Prophage | TA222386 | NZ_CP085983 | 2250893..2289204 | 0.009 | |
| Salmonella enterica strain SZL 38 | Prophage | TA222405 | NZ_CP085987 | 416871..455188 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain S34 | Prophage | TA222552 | NZ_CP086118 | 2107109..2145426 | 0 | |
| Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 | Prophage | TA226794 | NZ_CP088138 | 2112541..2150850 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain ZJUJY | Prophage | TA230377 | NZ_CP090304 | 1935544..1973853 | 0 | |
| Salmonella enterica strain 2008079-SE | Prophage | TA231019 | NZ_CP090529 | 2122749..2177274 | 0.009 | |
| Salmonella enterica strain 2017005-SE | Prophage | TA231050 | NZ_CP090533 | 2609961..2637961 | 0.008 | |
| Salmonella enterica strain 2016062-SE | Prophage | TA231099 | NZ_CP090539 | 2185771..2225765 | 0.001 | |
| Salmonella enterica strain 2010112-SE | Prophage | TA231124 | NZ_CP090541 | 2104240..2142557 | 0 | |
| Salmonella enterica strain 2017028-SE | Prophage | TA231149 | NZ_CP090545 | 2183982..2222299 | 0 | |
| Salmonella enterica strain 1559 | Prophage | TA233656 | NZ_CP091547 | 2610379..2638379 | 0.008 | |
| Salmonella enterica strain 137 | Prophage | TA233820 | NZ_CP091566 | 3997966..4052491 | 0.009 | |
| Salmonella enterica strain 131 | Prophage | TA233836 | NZ_CP091569 | 2085869..2140394 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Thompson | Prophage | TA236335 | NZ_CP092510 | 2046058..2084756 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Thompson strain MFDS1011657 | Prophage | TA236737 | NZ_CP092627 | 2045977..2084675 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Thompson strain MFDS1011716 | Prophage | TA236946 | NZ_CP092690 | 2046079..2084777 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Infantis strain 423_13 | Prophage | TA238304 | NZ_CP093373 | 1977604..2015913 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain ATOMSal-L6 | Prophage | TA247622 | NZ_CP098438 | 2065516..2118162 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain 013+ | Prophage | TA249294 | NZ_CP099705 | 2081505..2136022 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain 013+ | Prophage | TA249294 | NZ_CP099705 | 2097713..2136022 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867 | Prophage | TA251039 | NZ_CP100691 | 2195289..2234936 | 0.001 | |
| Salmonella enterica subsp. enterica serovar Thompson strain R18.0872 | Prophage | TA251111 | NZ_CP100702 | 1973097..2011795 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409 | Prophage | TA251134 | NZ_CP100707 | 2086618..2124935 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 | Prophage | TA251179 | NZ_CP100715 | 2076742..2108723 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain R18.1932 | Prophage | TA251263 | NZ_CP100732 | 1992461..2048475 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0292 | Prophage | TA251307 | NZ_CP100739 | 1992462..2048476 | 0.01 | |
| Salmonella enterica strain SC2016025 | Prophage | TA251953 | NZ_CP101372 | 2446527..2484844 | 0 | |
| Salmonella enterica strain SC2016042 | Prophage | TA251972 | NZ_CP101373 | 2155588..2193904 | 0 | |
| Salmonella enterica strain SC2016091 | Prophage | TA252013 | NZ_CP101376 | 2122697..2161014 | 0 | |
| Salmonella enterica strain SC2016290 | Prophage | TA252036 | NZ_CP101379 | 2115963..2156321 | 0.003 | |
| Salmonella enterica strain SC2017030 | Prophage | TA252059 | NZ_CP101382 | 2145349..2199874 | 0.01 | |
| Salmonella enterica strain SC2017100 | Prophage | TA252079 | NZ_CP101386 | 2157655..2212180 | 0.01 | |
| Salmonella enterica strain SC2017100 | Prophage | TA252079 | NZ_CP101386 | 2173863..2212180 | 0 | |
| Salmonella enterica strain SC2017167 | Prophage | TA252099 | NZ_CP101388 | 2124791..2163108 | 0 | |
| Salmonella enterica subsp. enterica strain QA-1986 973 | Prophage | TA252861 | NZ_CP101907 | 284727..323027 | 0 | |
| Salmonella enterica subsp. enterica strain QA-1986 974 | Prophage | TA253038 | NZ_CP101940 | 284727..323027 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 | Prophage | TA253913 | NZ_CP102669 | 2164367..2202676 | 0 | |
| Salmonella enterica strain SalSpp_sample_07_No.3 | Prophage | TA258079 | NZ_CP104484 | 2095004..2133321 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-65 | Prophage | TA263416 | NZ_CP110201 | 2083122..2137647 | 0.009 | |
| Salmonella enterica strain ZLQ | Prophage | TA265903 | NZ_CP113535 | 2121910..2176435 | 0.009 | |
| Salmonella enterica strain XSK | Prophage | TA265956 | NZ_CP113538 | 2021835..2076351 | 0.009 | |
| Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain BL708 | Prophage | TA267682 | NZ_CP116042 | 2122355..2160673 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 | Prophage | TA270173 | NZ_CP117244 | 2073445..2111754 | 0 | |
| Salmonella enterica subsp. enterica serovar Saintpaul strain RM106 | Prophage | TA270527 | NZ_CP117327 | 1983271..2021595 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain RM095 | Prophage | TA270612 | NZ_CP117338 | 2022987..2077503 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Heidelberg strain RM101 | Prophage | TA270699 | NZ_CP117348 | 2053842..2092165 | 0.003 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 | Prophage | TA270873 | NZ_CP117370 | 2121062..2161056 | 0.001 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 | Prophage | TA270873 | NZ_CP117370 | 2122739..2161056 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain RM015 | Prophage | TA271143 | NZ_CP117398 | 2112186..2166703 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain RM014 | Prophage | TA271163 | NZ_CP117400 | 2127075..2159048 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain RM085 | Prophage | TA271196 | NZ_CP117404 | 2075140..2113447 | 0 | |
| Salmonella enterica subsp. enterica serovar London strain F1 | Prophage | TA272044 | NZ_CP117696 | 1951158..1990059 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain 013 | Prophage | TA276144 | NZ_CP121262 | 2067806..2106115 | 0 | |
| Salmonella enterica subsp. enterica serovar Heidelberg isolate FT3-7B | Prophage | TA284496 | NZ_CP128261 | 2003650..2041973 | 0.003 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00004549 isolate AUSMDU00004549 | Prophage | TA294610 | NZ_OU015323 | 315464..368118 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944 | Prophage | TA294632 | NZ_OU015340 | 315465..368119 | 0.008 |