NC_0031971935544..1973853

MGE detailed information

MGE type: Prophage        MGE length: 38310 bp
Accession: NC_003197        Location: 1935544..1973853         Organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2       Replicon: chromosome


Gene structure

The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
STM1833 1931273..1931743 + 471 NP_460789.1 putative inner membrane protein -
STM1834 1932087..1932707 + 621 NP_460790.1 putative YebN family transport protein -
STM1835 1932704..1933513 - 810 NP_460791.1 23S rRNA m1G745 methyltransferase -
STM1836 1933579..1935324 - 1746 NP_460792.1 putative penicillin-binding protein-3 -
STM1837 1935544..1935753 - 210 NP_460793.1 cold shock protein -
STM1838 1935766..1935909 - 144 NP_460794.1 putative cytoplasmic protein -
STM1839 1936558..1936845 - 288 NP_460795.1 putative periplasmic or exported protein -
STM1840 1936916..1937059 - 144 NP_460796.1 putative inner membrane protein -
STM1841 1937217..1937456 + 240 NP_460797.1 putative outer membrane or exported -
STM1842 1937668..1938459 - 792 NP_460798.1 putative IclR family transcriptional repressor -
STM1843 1938635..1940008 + 1374 NP_460799.1 putative transport protein -
STM1844 1940056..1940937 - 882 NP_460800.1 heat shock protein -
STM1845 1941131..1943179 - 2049 NP_460801.1 carboxy-terminal protease for penicillin-binding protein 3 -
STM1846 1943199..1943885 - 687 NP_460802.1 activator of proP -
STM1847 1943983..1944567 - 585 NP_460803.1 putative GAF domain-containing protein -
STM1848 1944609..1945892 + 1284 NP_460804.1 putative inner membrane protein -
STM1849 1945855..1948494 + 2640 NP_460805.1 Intermembrane transport protein YebT VF
STM1850 1948572..1950011 + 1440 NP_460806.1 putative rRNA methyltransferase -
STM1851 1950126..1950365 + 240 NP_460807.1 putative cytoplasmic protein -
STM1852 1950476..1950667 + 192 NP_460808.1 putative inner membrane lipoprotein -
STM1853 1950686..1951336 - 651 NP_460809.1 serine/threonine protein phosphatase -
STM1854 1951560..1951724 - 165 NP_460810.1 putative inner membrane protein -
STM1855 1952009..1952731 - 723 NP_460811.1 Guanine nucleotide exchange factor sopE2 VF
STM1856 1953415..1953810 + 396 NP_460812.1 putative cytoplasmic protein -
STM1857 1955004..1955423 - 420 NP_460813.1 putative acetyltransferase -
STM1858 1955793..1956062 + 270 NP_460814.1 putative cytoplasmic protein -
STM1859 1956228..1956368 + 141 NP_460815.3 putative cytoplasmic protein -
STM1860 1956851..1957708 - 858 NP_448275.1 IS256 family transposase IS285 Transposase
STM1861 1957832..1958200 + 369 NP_448276.1 hypothetical protein ; Integrase Integrase
STM1862 1959504..1960418 + 915 NP_460818.1 PhoPQ-activated protein -
STM1863 1960551..1960709 + 159 NP_460819.1 putative inner membrane protein -
STM1864 1960719..1961333 + 615 NP_460820.1 putative inner membrane protein -
STM1865 1961660..1961785 - 126 NP_448280.1 putative cytoplasmic protein -
STM1867 1963176..1963376 + 201 NP_460822.1 PhoPQ-activated protein -
STM1868 1963473..1964354 - 882 NP_460823.1 phage-tail assembly protein-like protein -
STM1868A 1965080..1965247 + 168 NP_460824.1 lytic enzyme -
STM1869 1965504..1966037 - 534 NP_460825.1 phage-tail assembly protein-like protein -
STM1869A 1966091..1966378 - 288 NP_460826.1 hypothetical protein -
STM1870 1966511..1967005 + 495 NP_460827.1 recE-like protein -
STM1871 1967023..1967919 + 897 NP_448287.1 hypothetical protein ; Integrase Integrase
- 1968048..1968193 + 146 - - Antitoxin Detail
- 1968050..1968153 - 104 - - Toxin Detail
STM1872 1968116..1968235 - 120 NP_460829.1 putative cytoplasmic protein -
STM1873 1968293..1968646 - 354 NP_460830.1 putative periplasmic or exported protein -
STM1874 1968663..1969538 - 876 NP_460831.1 putative inner membrane protein -
STM1875 1969539..1969913 - 375 NP_460832.1 similar Cu resistance protein CopC -
STM1876 1970051..1970281 + 231 NP_460833.1 DNA polymerase III, theta subunit -
STM1877 1970389..1971045 + 657 NP_460834.1 putative amidohydrolase -
STM1878 1971069..1971767 + 699 NP_460835.1 DNA exonuclease X -
STM1879 1971802..1973853 - 2052 NP_460836.1 protease II -
STM1880 1974066..1974725 - 660 NP_460837.1 putative inner membrane protein -
STM1881 1974819..1975172 - 354 NP_460838.1 putative periplasmic protein -
STM1882 1975240..1975530 - 291 NP_460839.1 DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS -
STM1883 1975661..1976839 + 1179 NP_460840.1 phosphoribosylglycinamide formyltransferase 2 -
STM1884 1976939..1977580 - 642 NP_460841.1 2-keto-3-deoxygluconate 6-phosphate aldolase -

Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 Prophage TA297229 UFRD01000002 813036..851340 0
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S Prophage TA26047 NC_016856 1954607..1985261 0.005
Salmonella enterica serovar Typhimurium Prophage TA26033 NC_016854 1928777..1959044 0.01
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 Prophage TA26076 NC_016863 1895143..1935129 0.001
Salmonella enterica subsp. enterica serovar Heidelberg str. Prophage TA29796 NC_021812 2424901..2455569 0.009
Salmonella enterica subsp. enterica serovar 4,5,12:i:- str. Prophage TA29825 NC_021820 3183590..3238108 0.009
Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 Prophage TA30165 NC_022544 1885289..1923607 0
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3835 Prophage TA37175 NZ_AP023288 2135223..2173540 0
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3837 Prophage TA37199 NZ_AP023289 2201777..2241771 0.002
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3844 Prophage TA37223 NZ_AP023290 2096593..2136587 0.001
Salmonella enterica subsp. enterica serovar Typhimurium strain L-4126 Prophage TA37247 NZ_AP023291 2108556..2136556 0.008
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4233 Prophage TA37271 NZ_AP023292 2082074..2120390 0
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4261 Prophage TA37295 NZ_AP023294 2081358..2119674 0
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4445 Prophage TA37344 NZ_AP023300 2065261..2119785 0.009
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4526 Prophage TA37375 NZ_AP023303 2122962..2177487 0.009
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4567 Prophage TA37421 NZ_AP023306 2065259..2119783 0.009
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4578 Prophage TA37454 NZ_AP023309 2054059..2092375 0
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4605 Prophage TA37503 NZ_AP023313 2073537..2111853 0
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4614 Prophage TA37532 NZ_AP023315 2081441..2119757 0
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4681 Prophage TA37557 NZ_AP023317 2106458..2159112 0.009
Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216 Prophage TA146337 NZ_CP047522 2819709..2859703 0.002
Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10640 Prophage TA146417 NZ_CP047529 2832708..2887233 0.009
Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10484 Prophage TA146438 NZ_CP047531 2126538..2166532 0.002
Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10359 Prophage TA146518 NZ_CP047540 2096291..2151592 0.01
Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10250 Prophage TA146568 NZ_CP047544 2152982..2207507 0.01
Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10057 Prophage TA146643 NZ_CP047550 2140221..2168797 0.007
Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10231 Prophage TA146672 NZ_CP047553 2819492..2874017 0.009
Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10112 Prophage TA146703 NZ_CP047555 3988931..4028925 0.002
Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625 Prophage TA185716 NZ_CP067091 1935468..1971691 0.001
Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 Prophage TA186245 NZ_CP067397 1936204..1974513 0
Salmonella enterica strain 1722 Prophage TA186441 NZ_CP068018 2602225..2656750 0.009
Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP16345 Prophage TA187605 NZ_CP068696 2576270..2616256 0.001
Salmonella enterica strain GSJ/2016-Sal-016 Prophage TA190273 NZ_CP069381 1995955..2034279 0.004
Salmonella enterica subsp. enterica serovar Typhimurium strain SO_8752_Stm Prophage TA201368 NZ_CP074092 1935544..1973853 0
Salmonella enterica subsp. enterica serovar Typhimurium strain A_cip Prophage TA201393 NZ_CP074094 1935698..1974007 0.007
Salmonella enterica subsp. enterica serovar Typhimurium strain 2B_cip Prophage TA201417 NZ_CP074096 1935712..1975698 0.009
Salmonella enterica subsp. enterica serovar Typhimurium strain C_cip Prophage TA201441 NZ_CP074098 1935763..1974080 0.007
Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN008081 Prophage TA202570 NZ_CP074663 2095146..2149656 0.009
Salmonella enterica subsp. enterica serovar Stanleyville strain CFSAN059881 Prophage TA202976 NZ_CP075116 1986011..2024534 0.004
Salmonella enterica strain CFSAN033950 Prophage TA203276 NZ_CP075141 1962917..2017434 0.009
Salmonella enterica subsp. enterica strain CFSAN058565 Prophage TA207586 NZ_CP077704 2054322..2092246 0.008
Salmonella enterica strain sg1722-1 Prophage TA212651 NZ_CP081187 2079863..2134388 0.009
Salmonella enterica strain sg1722-2 Prophage TA212675 NZ_CP081189 2057993..2085993 0.008
Salmonella enterica subsp. enterica serovar London isolate N18-04674 Prophage TA215634 NZ_CP082929 1973385..2012286 0.007
Salmonella enterica subsp. enterica serovar Saintpaul strain S25 Prophage TA221070 NZ_CP085696 2002388..2042389 0.005
Salmonella enterica subsp. enterica serovar Typhimurium strain Blastoise Prophage TA221971 NZ_CP085819 4011205..4049513 0
Salmonella enterica strain SZL 31 Prophage TA222386 NZ_CP085983 2250893..2289204 0.009
Salmonella enterica strain SZL 38 Prophage TA222405 NZ_CP085987 416871..455188 0
Salmonella enterica subsp. enterica serovar Typhimurium strain S34 Prophage TA222552 NZ_CP086118 2107109..2145426 0
Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 Prophage TA226794 NZ_CP088138 2112541..2150850 0
Salmonella enterica subsp. enterica serovar Typhimurium strain ZJUJY Prophage TA230377 NZ_CP090304 1935544..1973853 0
Salmonella enterica strain 2008079-SE Prophage TA231019 NZ_CP090529 2122749..2177274 0.009
Salmonella enterica strain 2017005-SE Prophage TA231050 NZ_CP090533 2609961..2637961 0.008
Salmonella enterica strain 2016062-SE Prophage TA231099 NZ_CP090539 2185771..2225765 0.002
Salmonella enterica strain 2010112-SE Prophage TA231124 NZ_CP090541 2104240..2142557 0
Salmonella enterica strain 2017028-SE Prophage TA231149 NZ_CP090545 2183982..2222299 0
Salmonella enterica strain 1559 Prophage TA233656 NZ_CP091547 2610379..2638379 0.008
Salmonella enterica strain 137 Prophage TA233820 NZ_CP091566 3997966..4052491 0.009
Salmonella enterica strain 131 Prophage TA233836 NZ_CP091569 2085869..2140394 0.009
Salmonella enterica subsp. enterica serovar Thompson Prophage TA236335 NZ_CP092510 2046058..2084756 0.006
Salmonella enterica subsp. enterica serovar Thompson strain MFDS1011657 Prophage TA236737 NZ_CP092627 2045977..2084675 0.006
Salmonella enterica subsp. enterica serovar Thompson strain MFDS1011716 Prophage TA236946 NZ_CP092690 2046079..2084777 0.006
Salmonella enterica subsp. enterica serovar Infantis strain 423_13 Prophage TA238304 NZ_CP093373 1977604..2015913 0.009
Salmonella enterica subsp. enterica serovar Typhimurium strain ATOMSal-L6 Prophage TA247622 NZ_CP098438 2065516..2118162 0.008
Salmonella enterica subsp. enterica serovar Typhimurium strain 013+ Prophage TA249294 NZ_CP099705 2081505..2136022 0.01
Salmonella enterica subsp. enterica serovar Typhimurium strain 013+ Prophage TA249294 NZ_CP099705 2097713..2136022 0
Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867 Prophage TA251039 NZ_CP100691 2195289..2234936 0.001
Salmonella enterica subsp. enterica serovar Thompson strain R18.0872 Prophage TA251111 NZ_CP100702 1973097..2011795 0.006
Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409 Prophage TA251134 NZ_CP100707 2086618..2124935 0
Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 Prophage TA251179 NZ_CP100715 2076742..2108723 0.007
Salmonella enterica strain SC2016025 Prophage TA251953 NZ_CP101372 2446527..2484844 0
Salmonella enterica strain SC2016042 Prophage TA251972 NZ_CP101373 2155588..2193904 0.001
Salmonella enterica strain SC2016091 Prophage TA252013 NZ_CP101376 2122697..2161014 0
Salmonella enterica strain SC2016290 Prophage TA252036 NZ_CP101379 2115963..2156321 0.003
Salmonella enterica strain SC2017030 Prophage TA252059 NZ_CP101382 2145349..2199874 0.01
Salmonella enterica strain SC2017100 Prophage TA252079 NZ_CP101386 2157655..2212180 0.01
Salmonella enterica strain SC2017100 Prophage TA252079 NZ_CP101386 2173863..2212180 0
Salmonella enterica strain SC2017167 Prophage TA252099 NZ_CP101388 2124791..2163108 0
Salmonella enterica subsp. enterica strain QA-1986 973 Prophage TA252861 NZ_CP101907 284727..323027 0
Salmonella enterica subsp. enterica strain QA-1986 974 Prophage TA253038 NZ_CP101940 284727..323027 0
Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Prophage TA253913 NZ_CP102669 2164367..2202676 0
Salmonella enterica strain SalSpp_sample_07_No.3 Prophage TA258079 NZ_CP104484 2095004..2133321 0
Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-65 Prophage TA263416 NZ_CP110201 2083122..2137647 0.009
Salmonella enterica strain ZLQ Prophage TA265903 NZ_CP113535 2121910..2176435 0.009
Salmonella enterica strain XSK Prophage TA265956 NZ_CP113538 2021835..2076351 0.009
Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain BL708 Prophage TA267682 NZ_CP116042 2122355..2160673 0
Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Prophage TA270173 NZ_CP117244 2073445..2111754 0
Salmonella enterica subsp. enterica serovar Saintpaul strain RM106 Prophage TA270527 NZ_CP117327 1983271..2021595 0.004
Salmonella enterica subsp. enterica serovar Typhimurium strain RM095 Prophage TA270612 NZ_CP117338 2022987..2077503 0.009
Salmonella enterica subsp. enterica serovar Heidelberg strain RM101 Prophage TA270699 NZ_CP117348 2053842..2092165 0.003
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 Prophage TA270873 NZ_CP117370 2121062..2161056 0.002
Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 Prophage TA270873 NZ_CP117370 2122739..2161056 0
Salmonella enterica subsp. enterica serovar Typhimurium strain RM015 Prophage TA271143 NZ_CP117398 2112186..2166703 0.009
Salmonella enterica subsp. enterica serovar Typhimurium strain RM014 Prophage TA271163 NZ_CP117400 2127075..2159048 0.007
Salmonella enterica subsp. enterica serovar Typhimurium strain RM085 Prophage TA271196 NZ_CP117404 2075140..2113447 0
Salmonella enterica subsp. enterica serovar London strain F1 Prophage TA272044 NZ_CP117696 1951158..1990059 0.007
Salmonella enterica subsp. enterica serovar Typhimurium strain 013 Prophage TA276144 NZ_CP121262 2067806..2106115 0
Salmonella enterica subsp. enterica serovar Heidelberg isolate FT3-7B Prophage TA284496 NZ_CP128261 2003650..2041973 0.003
Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00004549 isolate AUSMDU00004549 Prophage TA294610 NZ_OU015323 315464..368118 0.008
Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944 Prophage TA294632 NZ_OU015340 315465..368119 0.008
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S Prophage TA26047 NC_016856 1954607..1985261 0.005
Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 Prophage TA297229 UFRD01000002 813036..851340 0