Regulators of regulatory pathway: QS regulatory pathway

All displayed regulators are experimentally validated.


Note: in the 'Target' column, ↓ means the target is positively regulated by the regulator, while ↑ indicates negative regulation.
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
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Regulator ID
Locus tag (Gene)
Related T6SS
Regulator type
Regulatory pathway
Organism                
Replicon (Accession)
Coordinates (Strand)
NCBI ID
Target (Regulation)
REG0019 experimentalPC1_3721 (Hfq)T6SS01001 insolicoproteinQS regulatory pathwayPectobacterium carotovorum subsp. carotovorum PC1chromosome (CP001657)4199890..4200189 (-)251756660hcp expression (↓)
REG0022 experimentalGPY04_RS03590 (TfoX)T6SS01168 experimentalproteinQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)777344..777952 (+)487807468Unknown (↓)
REG0023 experimentalGPY04_RS00870 (HapR)T6SS01168 experimentalproteinQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)164935..165546 (-)446262243Unknown (↓)
REG0025 experimentalQrr1 quorum regulatory RNAT6SS01168 experimentalncRNAQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)--VCA0107 mRNA (↑)
REG0026 experimentalQrr2 quorum regulatory RNAT6SS01168 experimentalncRNAQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)--VCA0107 mRNA (↑)
REG0027 experimentalQrr3 quorum regulatory RNAT6SS01168 experimentalncRNAQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)--VCA0107 mRNA (↑)
REG0028 experimentalQrr4 quorum regulatory RNAT6SS01168 experimentalncRNAQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)--VCA0107 mRNA (↑)
REG0029 experimentalGPY04_RS15835 (luxO)T6SS01168 experimentalproteinQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046845)273631..274983 (-)446367907VC0070 (tsrA) (↑); GPY04_RS00870 (hapR) (↑)
REG0059 experimentalPA4704.1 (prrF1)T6SS00003 experimental; T6SS00004 experimentalncRNAQS regulatory pathwayPseudomonas aeruginosa PAO1chromosome (NC_002516)5283960..5284110 (+)4179187T6SS transcripts (↓)
REG0060 experimentalPA4704.2 (prrF2)T6SS00003 experimental; T6SS00004 experimentalncRNAQS regulatory pathwayPseudomonas aeruginosa PAO1chromosome (NC_002516)5284172..5284319 (+)4179185T6SS transcripts (↓)
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Note: in the 'Target' column, ↓ means the target is positively regulated by the regulator, while ↑ indicates negative regulation.
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
JSONXMLCSVTXTSQLMS-Excel
Loading, please wait
Regulator ID
Locus tag (Gene)
Related T6SS
Regulator type
Regulatory pathway
Organism                
Replicon (Accession)
Coordinates (Strand)
NCBI ID
Target (Regulation)
REG0019 experimentalPC1_3721 (Hfq)T6SS01001 insolicoproteinQS regulatory pathwayPectobacterium carotovorum subsp. carotovorum PC1chromosome (CP001657)4199890..4200189 (-)251756660hcp expression (↓)
REG0022 experimentalGPY04_RS03590 (TfoX)T6SS01168 experimentalproteinQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)777344..777952 (+)487807468Unknown (↓)
REG0023 experimentalGPY04_RS00870 (HapR)T6SS01168 experimentalproteinQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)164935..165546 (-)446262243Unknown (↓)
REG0029 experimentalGPY04_RS15835 (luxO)T6SS01168 experimentalproteinQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046845)273631..274983 (-)446367907VC0070 (tsrA) (↑); GPY04_RS00870 (hapR) (↑)
REG0062 experimentalPA1244 (QslA)T6SS00004 experimentalproteinQS regulatory pathwayPseudomonas aeruginosa PAO1chromosome (NC_002516)1348060..1348401 (-)15596441H2-T6SS (PA1656) promotor (↑)
REG0065 experimentalPA1430 (LasR)T6SS00004 experimentalproteinGlobal regulator; QS regulatory pathwayPseudomonas aeruginosa PAO1chromosome (NC_002516)1558171..1558890 (+)15596627H2-T6SS promotor P (hsiA2) (↓)
REG0066 experimentalPA3476 (rhlI)T6SS00004 experimentalproteinQS regulatory pathwayPseudomonas aeruginosa PAO1chromosome (NC_002516)3889139..3889744 (-)15598672PA3477 (RhlR) (↓)
REG0067 experimentalPA3477 (RhlR)T6SS00004 experimentalproteinQS regulatory pathwayPseudomonas aeruginosa PAO1chromosome (NC_002516)3889925..3890650 (-)15598673T6SS transcript (↓)
REG0070 experimentalpa1663 (sfa2)T6SS00004 experimental; T6SS00005 experimentalproteinGlobal regulator; QS regulatory pathwayPseudomonas aeruginosa PAO1chromosome (NC_002516)1813395..1814906 (+)15596860PA4462 (rpoN) (↑); T6SS transcript (↑); T6SS transcript (↓)
REG0093 experimentalECA_RS00520 (expI)T6SS00040 experimentalproteinQS regulatory pathwayPectobacterium atrosepticum SCRI1043chromosome (NC_004547)125689..126339 (+)499404281T6SS transcripts (ECA4275[hcp1], ECA3428[hcp2] and ECA2866[hcp3]) (↓)
Showing 1 to 10 of 69 rows
102550100
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Note: in the 'Target' column, ↓ means the target is positively regulated by the regulator, while ↑ indicates negative regulation.
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
JSONXMLCSVTXTSQLMS-Excel
Loading, please wait
Regulator ID
Locus tag (Gene)
Related T6SS
Regulator type
Regulatory pathway
Organism                
Replicon (Accession)
Coordinates (Strand)
NCBI ID
Target (Regulation)
REG0025 experimentalQrr1 quorum regulatory RNAT6SS01168 experimentalncRNAQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)--VCA0107 mRNA (↑)
REG0026 experimentalQrr2 quorum regulatory RNAT6SS01168 experimentalncRNAQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)--VCA0107 mRNA (↑)
REG0027 experimentalQrr3 quorum regulatory RNAT6SS01168 experimentalncRNAQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)--VCA0107 mRNA (↑)
REG0028 experimentalQrr4 quorum regulatory RNAT6SS01168 experimentalncRNAQS regulatory pathwayVibrio cholerae C6706chromosome (NZ_CP046844)--VCA0107 mRNA (↑)
REG0059 experimentalPA4704.1 (prrF1)T6SS00003 experimental; T6SS00004 experimentalncRNAQS regulatory pathwayPseudomonas aeruginosa PAO1chromosome (NC_002516)5283960..5284110 (+)4179187T6SS transcripts (↓)
REG0060 experimentalPA4704.2 (prrF2)T6SS00003 experimental; T6SS00004 experimentalncRNAQS regulatory pathwayPseudomonas aeruginosa PAO1chromosome (NC_002516)5284172..5284319 (+)4179185T6SS transcripts (↓)
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