NZ_CP025520488442..510148

MGE detailed information

MGE type: Prophage        MGE length: 21707 bp
Accession: NZ_CP025520        Location: 488442..510148         Organism: Escherichia coli strain DH5alpha       Replicon: chromosome


Gene structure

The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CDN75_RS02635 484957..485703 + 747 WP_000636571.1 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG -
CDN75_RS02640 485792..486478 + 687 WP_000215549.1 DNA-binding transcriptional regulator YdfH -
CDN75_RS02645 486655..486858 + 204 WP_000214712.1 putative selenium delivery protein YdfZ -
CDN75_RS02650 486893..488353 - 1461 WP_000527743.1 mannitol dehydrogenase family protein -
CDN75_RS02655 488442..489809 - 1368 Protein_491 MHS family MFS transporter -
CDN75_RS24035 490330..490443 + 114 WP_120795384.1 hypothetical protein -
CDN75_RS02660 490512..490745 + 234 WP_000836768.1 cold shock protein YdfK -
CDN75_RS02665 491062..491652 + 591 WP_000078177.1 Tn3 family transposase TnpR_ISSba14 Transposase
CDN75_RS02670 491750..492325 - 576 WP_000885611.1 tail fiber assembly protein -
CDN75_RS02675 492325..493287 - 963 WP_001027733.1 phage tail protein -
CDN75_RS02680 493238..493807 - 570 WP_000453612.1 DNA-packaging protein -
CDN75_RS02690 494196..494429 + 234 WP_001368374.1 YlcI/YnfO family protein -
CDN75_RS02695 494487..494897 + 411 WP_000373090.1 DUF1398 domain-containing protein -
CDN75_RS02700 495049..495222 - 174 WP_001019606.1 addiction module toxin, GnsA/GnsB family -
CDN75_RS02705 495394..495549 - 156 WP_001309517.1 hypothetical protein -
CDN75_RS24040 495628..495693 - 66 WP_120795388.1 hypothetical protein -
CDN75_RS02710 495696..495884 - 189 WP_071524604.1 cold-shock protein -
CDN75_RS02715 495895..496107 - 213 WP_000066495.1 cold shock protein CspI -
CDN75_RS02725 496470..496967 - 498 WP_001071769.1 DUF2514 domain-containing protein -
CDN75_RS02730 496964..497497 - 534 WP_001092971.1 lysozyme -
CDN75_RS02735 497494..497805 - 312 WP_000189916.1 YdfR family protein -
CDN75_RS02740 497810..498025 - 216 WP_000839590.1 phage lysis protein EssD -
CDN75_RS24360 498245..498415 + 171 WP_211180497.1 putative zinc-binding protein YnfU -
CDN75_RS02745 498779..498994 - 216 WP_000066484.1 cold shock-like protein CspB -
CDN75_RS02750 499295..499507 + 213 WP_000087756.1 cold shock-like protein CspF -
CDN75_RS24045 499562..499651 + 90 WP_120795389.1 hypothetical protein -
CDN75_RS02755 499929..500681 - 753 WP_001047135.1 antitermination protein -
CDN75_RS02760 500695..501744 - 1050 WP_001265198.1 DUF968 domain-containing protein -
CDN75_RS02765 501746..502024 - 279 WP_012304870.1 hypothetical protein -
CDN75_RS02770 502091..502342 - 252 WP_000980994.1 hypothetical protein -
CDN75_RS02775 502559..502714 - 156 WP_000813254.1 type I toxin-antitoxin system toxin HokD -
CDN75_RS02780 502786..503073 - 288 WP_000323025.1 type II toxin-antitoxin system mRNA interferase RelE Toxin Detail
CDN75_RS02785 503073..503312 - 240 WP_000534858.1 type II toxin-antitoxin system antitoxin RelB Antitoxin Detail
CDN75_RS02790 503337..503642 + 306 WP_001326990.1 hypothetical protein -
CDN75_RS02795 503845..504177 + 333 WP_001301033.1 protein FlxA -
CDN75_RS24050 504614..504763 - 150 WP_011443592.1 hypothetical protein -
CDN75_RS02805 504798..505076 - 279 Protein_523 hypothetical protein -
CDN75_RS02810 505060..505290 - 231 WP_000920568.1 dicB transcriptional regulator DicC -
CDN75_RS02815 505374..505781 + 408 WP_000448564.1 DNA-binding transcriptional dual regulator DicA -
CDN75_RS02820 505948..506103 + 156 WP_000379575.1 DUF1391 family protein -
CDN75_RS02830 506263..506481 + 219 WP_001171942.1 hypothetical protein -
CDN75_RS02840 507049..507237 + 189 WP_000854559.1 cell division inhibition protein DicB -
CDN75_RS02845 507234..507425 + 192 WP_001083297.1 lysis protein YdfD -
CDN75_RS02850 507518..508285 + 768 Protein_530 exonuclease -
CDN75_RS02855 508282..508977 + 696 Protein_531 IS3 family transposase IS2 Transposase
CDN75_RS02860 508991..510148 + 1158 Protein_532 Putative defective protein IntQ ; Integrase Integrase
CDN75_RS02870 510336..511355 - 1020 WP_000836066.1 Zn-dependent oxidoreductase -
CDN75_RS02875 511367..512581 - 1215 WP_001295394.1 starvation-sensing protein RspA -
CDN75_RS02885 512787..513113 - 327 WP_000598292.1 YnfA family protein -
CDN75_RS02890 513248..513589 + 342 WP_000705211.1 DUF1283 family protein -
CDN75_RS02895 513624..514184 + 561 WP_001138581.1 spermidine N1-acetyltransferase -
CDN75_RS02900 514187..514897 - 711 WP_001321287.1 YnfC family lipoprotein -

Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Prophage TA20026 CP009789 1611431..1634475 0.002
Escherichia coli str. K-12 substr. W3110 Prophage TA21438 NC_007779 1632716..1654422 0
Escherichia coli DH1 Prophage TA27404 NC_017638 1615804..1634890 0.003
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Prophage TA68425 NZ_CP017979 1534772..1559021 0.002
Escherichia coli DH1 Prophage TA27404 NC_017638 1615804..1634890 0.003
Escherichia coli str. K-12 substr. W3110 Prophage TA21438 NC_007779 1632716..1654422 0
Escherichia coli K-12 strain ER3413 Prophage TA20026 CP009789 1611431..1634475 0.002
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Prophage TA68425 NZ_CP017979 1534772..1559021 0.002
Escherichia coli DH1 Prophage TA27170 NC_017625 2221734..2249263 0.006
Escherichia coli KLY Prophage TA47503 NZ_CP008801 1603634..1629197 0.004
Escherichia coli ER2796 strain K-12 ER2796 Prophage TA49364 NZ_CP009644 1611430..1634474 0.002
Escherichia coli K-12 strain K-12 ER3413 Prophage TA49791 NZ_CP009789 1611431..1634475 0.002
Escherichia coli strain S3 Prophage TA51530 NZ_CP010228 1772384..1794137 0.009
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52436 NZ_CP010438 2386667..2409580 0.002
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52469 NZ_CP010439 2371482..2397224 0.005
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52507 NZ_CP010440 2388114..2409820 0
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52590 NZ_CP010442 2427371..2449077 0
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52672 NZ_CP010444 2376569..2399482 0.002
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52714 NZ_CP010445 2427370..2449076 0
Escherichia coli strain RR1 Prophage TA53405 NZ_CP011113 1593305..1621509 0.006
Escherichia coli strain SQ37 Prophage TA53844 NZ_CP011320 1629027..1650733 0
Escherichia coli strain SQ88 Prophage TA53887 NZ_CP011321 1626109..1645195 0.003
Escherichia coli strain SQ110 Prophage TA53930 NZ_CP011322 1626108..1645194 0.003
Escherichia coli strain SQ2203 Prophage TA53973 NZ_CP011324 1626109..1645195 0.003
Escherichia coli K-12 substr. GM4792 Prophage TA54060 NZ_CP011342 1612692..1634398 0
Escherichia coli strain NCM3722 isolate K-12 Prophage TA54325 NZ_CP011495 2885760..2906182 0.003
Escherichia coli strain DH1Ec095 Prophage TA55840 NZ_CP012125 1615805..1634891 0.003
Escherichia coli strain DH1Ec104 Prophage TA55883 NZ_CP012126 1615806..1634892 0.003
Escherichia coli strain HST04 Prophage TA59671 NZ_CP013952 4226718..4253586 0.005
Escherichia coli K-12 strain K-12 DHB4 Prophage TA60527 NZ_CP014270 1536107..1559149 0
Escherichia coli K-12 strain K-12 C3026 Prophage TA60579 NZ_CP014272 1735171..1759420 0.002
Escherichia coli strain ER1821R Prophage TA64139 NZ_CP016018 2227145..2248851 0
Escherichia coli strain K-12 NEB 5-alpha Prophage TA65978 NZ_CP017100 1576886..1599799 0.001
Escherichia coli strain CAR Prophage TA92762 NZ_CP026026 1629026..1650732 0
Escherichia coli strain LIM Prophage TA92803 NZ_CP026027 1629027..1650733 0
Escherichia coli strain CIT Prophage TA92846 NZ_CP026028 1629027..1650733 0
Escherichia coli strain 9FA Prophage TA93861 NZ_CP026342 1631002..1657870 0.006
Escherichia coli strain 8A Prophage TA93990 NZ_CP026345 1629453..1657870 0.007
Escherichia coli strain 7FA Prophage TA94033 NZ_CP026346 1631002..1657870 0.006
Escherichia coli strain 5A Prophage TA94248 NZ_CP026351 1631002..1657870 0.006
Escherichia coli strain 4FA Prophage TA94291 NZ_CP026352 1631002..1657870 0.006
Escherichia coli strain 3FA Prophage TA94377 NZ_CP026354 1629215..1656744 0.006
Escherichia coli strain 2A Prophage TA94549 NZ_CP026358 1631002..1657870 0.006
Escherichia coli strain DTU-1 Prophage TA95275 NZ_CP026612 3159040..3179401 0.001
Escherichia coli strain J53 Prophage TA102958 NZ_CP028702 2064330..2086036 0
Escherichia coli strain ME8067 Prophage TA103002 NZ_CP028703 2489209..2510915 0.001
Escherichia coli strain BH212 Prophage TA105287 NZ_CP029239 1676357..1699399 0
Escherichia coli strain KR2009 Prophage TA126395 NZ_CP040664 1618743..1640164 0.001
Escherichia coli strain ATCC BAA-196 Prophage TA136307 NZ_CP042865 2229091..2255959 0.005
Escherichia coli strain ATCC BAA-196 Prophage TA136338 NZ_CP042867 2228999..2255867 0.005
Escherichia coli O16:H48 strain PG20180171 Prophage TA137428 NZ_CP043185 360597..386339 0.004
Escherichia coli O16:H48 strain PG20180063 Prophage TA137571 NZ_CP043193 2226806..2253674 0.006
Escherichia coli O16:H48 strain PG20180060 Prophage TA137672 NZ_CP043199 2664248..2685954 0
Escherichia coli O16:H48 strain PG20180054 Prophage TA137777 NZ_CP043205 2227930..2253672 0.005
Escherichia coli O16:H48 strain PG20180050 Prophage TA137876 NZ_CP043211 2516941..2538647 0
Escherichia coli O16:H48 strain CV601gfp Prophage TA137913 NZ_CP043213 2102857..2124563 0
Escherichia coli strain DH5alpha Prophage TA142456 NZ_CP045741 3271084..3299468 0.007
Escherichia coli strain C439 Prophage TA143414 NZ_CP046025 2233302..2255008 0
Escherichia coli K-12 Prophage TA145467 NZ_CP047127 4091062..4119454 0.007
Escherichia coli strain Dam/Dcm Prophage TA157065 NZ_CP053603 1615047..1641915 0.006
Escherichia coli strain NEB10-beta Prophage TA157102 NZ_CP053604 1721269..1744311 0
Escherichia coli strain NEB_Turbo Prophage TA157132 NZ_CP053605 1517365..1540270 0.001
Escherichia coli strain NEB5-alpha_F'Iq Prophage TA157177 NZ_CP053607 1577899..1599604 0
Escherichia coli strain IGC_EcoliInv_1.1 Prophage TA160046 NZ_CP054665 1635819..1661561 0.005
Escherichia coli strain SY3626C5 Prophage TA168003 NZ_CP058948 2064038..2085744 0
Escherichia coli strain SY3626C1 Prophage TA168131 NZ_CP059043 2064038..2085744 0
Escherichia coli strain AML001_ev02 Prophage TA173689 NZ_CP062240 1622609..1651001 0.007
Escherichia coli strain AML001_par Prophage TA173775 NZ_CP062242 1625259..1652127 0.006
Escherichia coli strain AML002_ev03 Prophage TA173990 NZ_CP062247 1626462..1649375 0.001
Escherichia coli strain AML002_ev02 Prophage TA174033 NZ_CP062248 1625260..1652128 0.006
Escherichia coli strain AML002_ev01 Prophage TA174076 NZ_CP062249 1626458..1649371 0.001
Escherichia coli K-12 strain CETR2G40 Prophage TA181470 NZ_CP064679 1625259..1652127 0.006
Escherichia coli K-12 strain BZKR3G40 Prophage TA181556 NZ_CP064681 1625259..1652127 0.006
Escherichia coli strain BTH101 Prophage TA194142 NZ_CP070482 1077771..1100813 0
Escherichia coli strain K-12 J53 Prophage TA194816 NZ_CP070962 1907593..1935799 0.007
Escherichia coli strain T159A Prophage TA199413 NZ_CP072986 2233302..2255008 0
Escherichia coli strain Stbl4 Prophage TA204590 NZ_CP076043 1160875..1190368 0.008
Escherichia coli strain K-12 substr. AB1157 Prophage TA205629 NZ_CP076404 1588934..1610640 0
Escherichia coli strain GB2005 Prophage TA209827 NZ_CP079735 2227908..2250948 0
Escherichia coli strain EC2648-Vir1 Prophage TA216849 NZ_CP083610 3708214..3729920 0
Escherichia coli strain EC2648-Vir2 Prophage TA217894 NZ_CP083990 2226787..2250280 0.002
Escherichia coli strain EC2648-R1 Prophage TA218214 NZ_CP084205 2226752..2251108 0.003
Escherichia coli strain EC2648-R1-1 Prophage TA218255 NZ_CP084207 3031857..3059386 0.006
Escherichia coli strain EC2648-R2 Prophage TA218286 NZ_CP084209 2222730..2250021 0.006
Escherichia coli strain g94 Prophage TA219827 NZ_CP084893 1634347..1656053 0
Escherichia coli strain g74 Prophage TA219913 NZ_CP084895 1634347..1656053 0
Escherichia coli strain gb37 Prophage TA219999 NZ_CP084897 1634347..1660089 0.004
Escherichia coli strain W3110-P Prophage TA220085 NZ_CP084899 1634347..1656053 0
Escherichia coli strain JW5503 Prophage TA224831 NZ_CP087136 1625806..1652674 0.006
Escherichia coli strain DOC14 Prophage TA232627 NZ_CP091065 2048147..2069853 0
Escherichia coli strain S-P-C-029.01 Prophage TA236980 NZ_CP092702 1631002..1657870 0.006
Escherichia coli strain ER2683 Prophage TA237841 NZ_CP093221 3343923..3370791 0.005
Escherichia coli strain EV36 mutant 1a Prophage TA238251 NZ_CP093368 2485630..2512498 0.006
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA246447 NZ_CP097882 2211254..2239646 0.007
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA246473 NZ_CP097883 2211254..2239646 0.007
Escherichia coli strain EMG2 Prophage TA249145 NZ_CP099588 2216211..2239704 0.002
Escherichia coli strain WG1 Prophage TA249176 NZ_CP099590 2219597..2250451 0.008
Escherichia coli strain THB42-F2 Prophage TA257630 NZ_CP104328 2227055..2248761 0
Escherichia coli strain THB42-F3 Prophage TA257660 NZ_CP104330 2226752..2250245 0.002
Escherichia coli strain THB42-F4 Prophage TA264306 NZ_CP110814 2226863..2248569 0
Escherichia coli strain THB42-F5 Prophage TA264338 NZ_CP110816 2226752..2250245 0.002
Escherichia coli strain THB42-F5 Prophage TA264338 NZ_CP110816 2226752..2251108 0.003
Escherichia coli strain TSW4881-W1 Prophage TA264399 NZ_CP110859 2237424..2260466 0.001
Escherichia coli strain CM19 Prophage TA266969 NZ_CP114894 982542..1005584 0
Escherichia coli strain CM56 Prophage TA267002 NZ_CP114895 2271311..2294353 0
Escherichia coli strain CM93 Prophage TA267021 NZ_CP114896 1086542..1109584 0
Escherichia coli strain JM109 Prophage TA272541 NZ_CP117962 6709..30202 0.002
Escherichia coli strain HT-947 Prophage TA276647 NZ_CP122315 3042452..3064158 0
Escherichia coli strain HT-948 Prophage TA276688 NZ_CP122317 162513..184219 0
Escherichia coli strain BW25113 Prophage TA276777 NZ_CP122319 4066853..4089766 0.001
Escherichia coli strain K-12 substr. HMS174 Prophage TA285399 NZ_LM993812 1600962..1621216 0.004
Escherichia coli isolate 103 Prophage TA293374 NZ_LT615378 1634656..1661524 0.006