20353

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type IV Classification (family/domain) yeeUV (cbtA-cbeA)/CbtA-CbeA
Location 1454277..1455072 Replicon chromosome
Accession NC_002695
Organism Escherichia coli O157:H7 str. Sakai

Toxin (Protein)


Gene name yeeV Uniprot ID -
Locus tag ECs_1406 Protein ID NP_309433.1
Coordinates 1454698..1455072 (+) Length 125 a.a.

Antitoxin (Protein)


Gene name yeeU Uniprot ID -
Locus tag ECs_1405 Protein ID NP_309432.1
Coordinates 1454277..1454651 (+) Length 125 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ECs_1398 1449632..1450537 + 906 NP_309425.1 chemotaxis protein -
ECs_1399 1450534..1451604 + 1071 NP_309426.1 phospholipase -
ECs_1401 1451944..1452762 + 819 NP_309428.1 hypothetical protein -
ECs_1402 1452853..1453338 + 486 NP_309429.1 antirestriction protein -
ECs_1403 1453354..1453830 + 477 NP_309430.1 DNA repair protein -
ECs_1404 1453893..1454114 + 222 NP_309431.1 hypothetical protein -
ECs_1405 1454277..1454651 + 375 NP_309432.1 antitoxin of toxin-antitoxin system Antitoxin
ECs_1406 1454698..1455072 + 375 NP_309433.1 hypothetical protein Toxin
ECs_1407 1455069..1455560 + 492 NP_309434.3 hypothetical protein -
ECs_1408 1455572..1455769 + 198 NP_309435.1 hypothetical protein -
ECs_1409 1455854..1456696 + 843 NP_309436.1 restriction methylase -
ECs_1410 1457167..1458105 + 939 NP_309437.2 glyoxylate/hydroxypyruvate reductase A -
ECs_1411 1458160..1458897 + 738 NP_309438.1 alkaline phosphatase -
ECs_1412 1458921..1459475 + 555 NP_309439.1 redox enzyme maturation protein -
ECs_1413 1459547..1460068 + 522 NP_309440.4 inner membrane protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Genomic island - csgG / csgF / csgE / csgD / csgB / csgA / csgC 1453354..1465636 12282


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(1-112)

Antitoxin

(18-117)


Sequences


Toxin        


Download         Length: 125 a.a.        Molecular weight: 14117.17 Da        Isoelectric Point: 7.7761

>T20353 NP_309433.1 NC_002695:1454698-1455072 [Escherichia coli O157:H7 str. Sakai]
MKTLSDTHVREVSRCPSPVTIWQTLLIRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
STCPRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK

Download         Length: 375 bp

>T20353 NC_002695:1454698-1455072 [Escherichia coli O157:H7 str. Sakai]
ATGAAAACATTATCCGACACACATGTACGGGAGGTATCTCGCTGCCCGTCTCCCGTCACCATCTGGCAGACACTGCTCAT
CCGACTGCTGGACCAGCATTATGGCCTCACACTGAATGACACACCGTTTGCCGATGAACGTGTGATTGAGCAGCATATTG
AGGCAGGCATTTCACTGTGTGATGCAGTTAATTTTCTCGTGGAAAAATACGCGCTGGTGCGTACCGACCAGCCGGGATTC
AGCACCTGTCCCCGCTCTCAGTTAATAAACAGTATTGATATCCTCCGGGCTCGCCGGGCGACCGGCCTGATGACCCGCGA
CAATTACAGAACGGTAAATAACATTACCCTGGGTAAGTATCCGGAGGCGAAATGA

Antitoxin


Download         Length: 125 a.a.        Molecular weight: 13718.51 Da        Isoelectric Point: 6.6249

>AT20353 NP_309432.1 NC_002695:1454277-1454651 [Escherichia coli O157:H7 str. Sakai]
VSDKLSGITHPDDNHDRPWWGLPCTVRPCFGARLVQEGNRLHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRYQHTVTLNAKGLTCEADTLGSCGYVYLAVYPTPAPATTS

Download         Length: 375 bp

>AT20353 NC_002695:1454277-1454651 [Escherichia coli O157:H7 str. Sakai]
GTGTCAGACAAACTCTCCGGGATAACTCATCCCGATGACAATCACGACCGCCCCTGGTGGGGGCTTCCCTGCACAGTGAG
GCCCTGTTTTGGCGCTCGTCTGGTGCAAGAGGGTAACCGCCTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGCCGCT
TCAGCGACGCAGATGCATACCATCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGATATCAGCATACCGTCACGCTGAATGCAAAAGGGCTGACCTGCGAAGCCGACACCCTCGGCTCCTG
TGGTTACGTTTATCTGGCTGTTTATCCGACACCAGCACCCGCAACCACCTCATAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure

References