Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) yeeUV (cbtA-cbeA)/CbtA-CbeA
Location 3365635..3366430 Replicon chromosome
Accession NZ_CP062729
Organism Escherichia coli O157:H7 strain Z1811

Toxin (Protein)


Gene name yeeV Uniprot ID B7UP43
Locus tag ILQ50_RS17295 Protein ID WP_000854914.1
Coordinates 3365635..3366009 (-) Length 125 a.a.

Antitoxin (Protein)


Gene name yeeU Uniprot ID A0A0B0VS41
Locus tag ILQ50_RS17300 Protein ID WP_001280954.1
Coordinates 3366056..3366430 (-) Length 125 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ILQ50_RS17255 3360639..3361130 - 492 WP_001301587.1 DUF1097 domain-containing protein -
ILQ50_RS17260 3361232..3361786 - 555 WP_001001917.1 molecular chaperone YcdY -
ILQ50_RS17265 3361810..3362547 - 738 WP_000283664.1 zinc-binding phosphatase -
ILQ50_RS17270 3362602..3363540 - 939 WP_000351284.1 glyoxylate/hydroxypyruvate reductase GhrA -
ILQ50_RS17280 3364011..3364853 - 843 WP_001280481.1 DUF4942 domain-containing protein -
ILQ50_RS17285 3364938..3365135 - 198 WP_000839282.1 DUF957 domain-containing protein -
ILQ50_RS17290 3365147..3365638 - 492 WP_000976853.1 hypothetical protein -
ILQ50_RS17295 3365635..3366009 - 375 WP_000854914.1 TA system toxin CbtA family protein Toxin
ILQ50_RS17300 3366056..3366430 - 375 WP_001280954.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin
ILQ50_RS17305 3366593..3366814 - 222 WP_001220314.1 DUF987 domain-containing protein -
ILQ50_RS17310 3366877..3367353 - 477 WP_001186738.1 RadC family protein -
ILQ50_RS17315 3367369..3367854 - 486 WP_000214398.1 antirestriction protein -
ILQ50_RS17320 3367945..3368763 - 819 WP_001234682.1 DUF945 domain-containing protein -
ILQ50_RS17325 3369103..3370173 - 1071 WP_000102669.1 patatin-like phospholipase family protein -
ILQ50_RS17330 3370170..3371075 - 906 WP_000203541.1 chemotaxis protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Genomic island - csgB / csgD / csgE / csgF / csgG 3357021..3367854 10833


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

CbtA toxin of type IV toxin-antitoxin system

(1-112)

Antitoxin

Antitoxin CbeA

(18-117)


Sequences

Toxin        


Download         Length: 125 a.a.        Molecular weight: 14117.17 Da        Isoelectric Point: 7.7761

>T175851 WP_000854914.1 NZ_CP062729:c3366009-3365635 [Escherichia coli O157:H7]
MKTLSDTHVREVSRCPSPVTIWQTLLIRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
STCPRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK

Download         Length: 375 bp

>T175851 NZ_CP082216:c11107-10814 [Xanthomonas cucurbitae]
GTGCCACAAGTAATCGTCACCGAAGGCGCGGCGGAAGGCTTGGAACGATGCCGGCGGTTCCTGGCCGTCAAGGCACCGGA
CGCCGCCAGGCGTGCCGGCCAGGCCATCGAGCGGCAATTCCTGCTGCTGGAGACGGCCCCCGACATTGGCCGGCCGTTCC
CTGAAATGCCCGAGCTGCGCGAGCTGGTGATTGCCTTCGGGGATTCCGGCTATGTGGCCCTGTACCGCCACGAACCGGCC
GACGATGCGGTGTATGTTCTGGCCTTCCGGCACCAGAAAGAGGCAGGCTACTGA

Antitoxin


Download         Length: 125 a.a.        Molecular weight: 13718.51 Da        Isoelectric Point: 6.6249

>AT175851 WP_001280954.1 NZ_CP062729:c3366430-3366056 [Escherichia coli O157:H7]
VSDKLSGITHPDDNHDRPWWGLPCTVRPCFGARLVQEGNRLHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRYQHTVTLNAKGLTCEADTLGSCGYVYLAVYPTPAPATTS

Download         Length: 375 bp

>AT175851 NZ_CP082216:c11367-11095 [Xanthomonas cucurbitae]
ATGGCAACGTCTCTCAAGATCGACGACACGCTGAAAGGTCGAGTCCACCACCTCGCCAGCCAGCGCCGCCGCTCGCCCCA
CTGGATCATGCTCGAAGCGATCCAGCAGTACGTCGAGCGCGAAGAAGCCCGCGAGAGCTTCAAGCAGGAAGCCTTGGCAT
CCTGGGCGGCCTACAAGGAAACCGGCCGTCACCTGACCGGCCAGGAAGTTCGCACCTGGTTGAACACCTGGGGCACCAGT
GACGAAAGGGCGGTGCCTGAGTGCCACAAGTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A7U9LXR5

Antitoxin

Source ID Structure
AlphaFold DB A0A0B0VS41

References