MGE detailed information
MGE type: Genomic_island MGE length: 10834 bp
Accession: NZ_CP022689 Location: 5249459..5260292 Organism: Escherichia coli strain CDC#03-98 Replicon: chromosome
Accession: NZ_CP022689 Location: 5249459..5260292 Organism: Escherichia coli strain CDC#03-98 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RM34_RS28305 () | 5244921..5246078 | + | 1158 | WP_001070358.1 | glucans biosynthesis protein MdoC | - |
| RM34_RS28310 () | 5246086..5247567 | - | 1482 | WP_010917790.1 | cardiolipin synthase ClsC | - |
| RM34_RS28315 () | 5247509..5248042 | - | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| RM34_RS28320 () | 5248137..5248448 | - | 312 | WP_000489578.1 | type 1 fimbrial protein | - |
| RM34_RS28325 () | 5248569..5248901 | - | 333 | WP_000992818.1 | curli assembly protein CsgC | - |
| RM34_RS28330 () | 5248960..5249418 | - | 459 | WP_000771428.1 | curlin major subunit CsgA | - |
| RM34_RS28335 () | 5249459..5249914 | - | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| RM34_RS28350 () | 5250668..5251318 | + | 651 | WP_000481500.1 | CsgBAC operon transcriptional regulatory protein | VF |
| RM34_RS28355 () | 5251323..5251712 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| RM34_RS28360 () | 5251737..5252153 | + | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| RM34_RS28365 () | 5252180..5253013 | + | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| RM34_RS28370 () | 5253077..5253568 | - | 492 | WP_001301587.1 | DUF1097 domain-containing protein | - |
| RM34_RS28375 () | 5253670..5254224 | - | 555 | WP_001001917.1 | molecular chaperone YcdY | - |
| RM34_RS28380 () | 5254248..5254985 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| RM34_RS28385 () | 5255040..5255978 | - | 939 | WP_000351284.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| RM34_RS28395 () | 5256449..5257291 | - | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| RM34_RS28400 () | 5257376..5257573 | - | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| RM34_RS28405 () | 5257585..5258076 | - | 492 | WP_000976853.1 | hypothetical protein | - |
| RM34_RS28410 () | 5258073..5258447 | - | 375 | WP_000854914.1 | TA system toxin CbtA family protein | Toxin Detail |
| RM34_RS28415 () | 5258494..5258868 | - | 375 | WP_001280954.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| RM34_RS28425 () | 5259031..5259252 | - | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| RM34_RS28430 () | 5259315..5259791 | - | 477 | WP_001186738.1 | RadC family protein | - |
| RM34_RS28435 () | 5259807..5260292 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| RM34_RS28440 () | 5260383..5261201 | - | 819 | WP_001234682.1 | DUF945 domain-containing protein | - |
| RM34_RS28455 () | 5261541..5262611 | - | 1071 | WP_000102669.1 | patatin-like phospholipase family protein | - |
| RM34_RS28460 () | 5262608..5263513 | - | 906 | WP_000203541.1 | chemotaxis protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20353 | NC_002695 | 1453354..1465636 | 0.006 |