Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) yeeUV (cbtA-cbeA)/CbtA-CbeA
Location 3226667..3227462 Replicon chromosome
Accession NZ_CP038398
Organism Escherichia coli O157:H7 strain DEC4E

Toxin (Protein)


Gene name yeeV Uniprot ID B7UP43
Locus tag E3154_RS16305 Protein ID WP_000854914.1
Coordinates 3226667..3227041 (-) Length 125 a.a.

Antitoxin (Protein)


Gene name yeeU Uniprot ID A0A0B0VS41
Locus tag E3154_RS16310 Protein ID WP_001280954.1
Coordinates 3227088..3227462 (-) Length 125 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
E3154_RS16265 3221671..3222162 - 492 WP_001301587.1 DUF1097 domain-containing protein -
E3154_RS16270 3222264..3222818 - 555 WP_001001917.1 molecular chaperone YcdY -
E3154_RS16275 3222842..3223579 - 738 WP_000283664.1 zinc-binding phosphatase -
E3154_RS16280 3223634..3224572 - 939 WP_000351284.1 glyoxylate/hydroxypyruvate reductase GhrA -
E3154_RS16290 3225043..3225885 - 843 WP_001280481.1 DUF4942 domain-containing protein -
E3154_RS16295 3225970..3226167 - 198 WP_000839282.1 DUF957 domain-containing protein -
E3154_RS16300 3226179..3226670 - 492 WP_000976853.1 hypothetical protein -
E3154_RS16305 3226667..3227041 - 375 WP_000854914.1 TA system toxin CbtA family protein Toxin
E3154_RS16310 3227088..3227462 - 375 WP_001280954.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin
E3154_RS16315 3227625..3227846 - 222 WP_001220314.1 DUF987 domain-containing protein -
E3154_RS16320 3227909..3228385 - 477 WP_001186738.1 RadC family protein -
E3154_RS16325 3228401..3228886 - 486 WP_000214398.1 antirestriction protein -
E3154_RS16330 3228977..3229795 - 819 WP_001234682.1 DUF945 domain-containing protein -
E3154_RS16335 3230135..3231205 - 1071 WP_000102669.1 patatin-like phospholipase family protein -
E3154_RS16340 3231202..3232107 - 906 WP_000203541.1 chemotaxis protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Genomic island - csgB / csgD / csgE / csgF / csgG 3218053..3228886 10833


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

CbtA toxin of type IV toxin-antitoxin system

(1-112)

Antitoxin

Antitoxin CbeA

(18-117)


Sequences

Toxin        


Download         Length: 125 a.a.        Molecular weight: 14117.17 Da        Isoelectric Point: 7.7761

>T122369 WP_000854914.1 NZ_CP038398:c3227041-3226667 [Escherichia coli O157:H7]
MKTLSDTHVREVSRCPSPVTIWQTLLIRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
STCPRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK

Download         Length: 375 bp

>T122369 NZ_CP038398:c3227041-3226667 [Escherichia coli O157:H7]
ATGAAAACATTATCCGACACACATGTACGGGAGGTATCTCGCTGCCCGTCTCCCGTCACCATCTGGCAGACACTGCTCAT
CCGACTGCTGGACCAGCATTATGGCCTCACACTGAATGACACACCGTTTGCCGATGAACGTGTGATTGAGCAGCATATTG
AGGCAGGCATTTCACTGTGTGATGCAGTTAATTTTCTCGTGGAAAAATACGCGCTGGTGCGTACCGACCAGCCGGGATTC
AGCACCTGTCCCCGCTCTCAGTTAATAAACAGTATTGATATCCTCCGGGCTCGCCGGGCGACCGGCCTGATGACCCGCGA
CAATTACAGAACGGTAAATAACATTACCCTGGGTAAGTATCCGGAGGCGAAATGA

Antitoxin


Download         Length: 125 a.a.        Molecular weight: 13718.51 Da        Isoelectric Point: 6.6249

>AT122369 WP_001280954.1 NZ_CP038398:c3227462-3227088 [Escherichia coli O157:H7]
VSDKLSGITHPDDNHDRPWWGLPCTVRPCFGARLVQEGNRLHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRYQHTVTLNAKGLTCEADTLGSCGYVYLAVYPTPAPATTS

Download         Length: 375 bp

>AT122369 NZ_CP038398:c3227462-3227088 [Escherichia coli O157:H7]
GTGTCAGACAAACTCTCCGGGATAACTCATCCCGATGACAATCACGACCGCCCCTGGTGGGGGCTTCCCTGCACAGTGAG
GCCCTGTTTTGGCGCTCGTCTGGTGCAAGAGGGTAACCGCCTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGCCGCT
TCAGCGACGCAGATGCATACCATCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGATATCAGCATACCGTCACGCTGAATGCAAAAGGGCTGACCTGCGAAGCCGACACCCTCGGCTCCTG
TGGTTACGTTTATCTGGCTGTTTATCCGACACCAGCACCCGCAACCACCTCATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A7U9LXR5

Antitoxin

Source ID Structure
AlphaFold DB A0A0B0VS41

References