MGE detailed information
MGE type: Genomic_island MGE length: 10834 bp
Accession: NZ_CP076230 Location: 3354661..3365494 Organism: Escherichia coli O157:H7 strain Rafaela_II Replicon: chromosome
Accession: NZ_CP076230 Location: 3354661..3365494 Organism: Escherichia coli O157:H7 strain Rafaela_II Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XF37_RS17400 (3350123) | 3350123..3351280 | + | 1158 | WP_001070358.1 | glucans biosynthesis protein MdoC | - |
| XF37_RS17405 (3351288) | 3351288..3352769 | - | 1482 | WP_010917790.1 | cardiolipin synthase ClsC | - |
| XF37_RS17410 (3352711) | 3352711..3353244 | - | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| XF37_RS17415 (3353339) | 3353339..3353650 | - | 312 | WP_000489578.1 | protein YmdA | - |
| XF37_RS17420 (3353771) | 3353771..3354103 | - | 333 | WP_000992818.1 | curli assembly chaperone CsgC | - |
| XF37_RS17425 (3354162) | 3354162..3354620 | - | 459 | WP_000771428.1 | curli major subunit CsgA | - |
| XF37_RS17430 (3354661) | 3354661..3355116 | - | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| XF37_RS17435 (3355870) | 3355870..3356520 | + | 651 | WP_000481500.1 | CsgBAC operon transcriptional regulatory protein | VF |
| XF37_RS17440 (3356525) | 3356525..3356914 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| XF37_RS17445 (3356939) | 3356939..3357355 | + | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| XF37_RS17450 (3357382) | 3357382..3358215 | + | 834 | WP_001189328.1 | Curli production assembly/transport component CsgG | VF |
| XF37_RS17455 (3358279) | 3358279..3358770 | - | 492 | WP_001301587.1 | DUF1097 domain-containing protein | - |
| XF37_RS17460 (3358872) | 3358872..3359426 | - | 555 | WP_001001917.1 | molecular chaperone YcdY | - |
| XF37_RS17465 (3359450) | 3359450..3360187 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| XF37_RS17470 (3360242) | 3360242..3361180 | - | 939 | WP_000351284.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| XF37_RS17480 (3361651) | 3361651..3362493 | - | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| XF37_RS17485 (3362578) | 3362578..3362775 | - | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| XF37_RS17490 (3362787) | 3362787..3363278 | - | 492 | WP_000976853.1 | DUF5983 family protein | - |
| XF37_RS17495 (3363275) | 3363275..3363649 | - | 375 | WP_000854914.1 | TA system toxin CbtA family protein | Toxin Detail |
| XF37_RS17500 (3363696) | 3363696..3364070 | - | 375 | WP_001280954.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| XF37_RS17505 (3364233) | 3364233..3364454 | - | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| XF37_RS17510 (3364517) | 3364517..3364993 | - | 477 | WP_001186738.1 | RadC family protein | - |
| XF37_RS17515 (3365009) | 3365009..3365494 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| XF37_RS17520 (3365585) | 3365585..3366403 | - | 819 | WP_001234682.1 | DUF932 domain-containing protein | - |
| XF37_RS17525 (3366743) | 3366743..3367813 | - | 1071 | WP_000102669.1 | patatin-like phospholipase family protein | - |
| XF37_RS17530 (3367810) | 3367810..3368715 | - | 906 | WP_000203541.1 | diguanylate cyclase regulator RdcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20353 | NC_002695 | 1453354..1465636 | 0.006 |