MGE detailed information
MGE type: Genomic_island MGE length: 12283 bp
Accession: NZ_CP010304 Location: 1395781..1408063 Organism: Escherichia coli O157:H7 str. SS52 Replicon: chromosome
Accession: NZ_CP010304 Location: 1395781..1408063 Organism: Escherichia coli O157:H7 str. SS52 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SS52_RS06795 () | 1392059..1392964 | + | 906 | WP_000203541.1 | chemotaxis protein | - |
| SS52_RS06800 () | 1392961..1394031 | + | 1071 | WP_000102669.1 | patatin-like phospholipase family protein | - |
| SS52_RS06810 () | 1394371..1395189 | + | 819 | WP_001234682.1 | DUF945 domain-containing protein | - |
| SS52_RS06815 () | 1395280..1395765 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| SS52_RS06820 () | 1395781..1396257 | + | 477 | WP_001186738.1 | RadC family protein | - |
| SS52_RS06825 () | 1396320..1396541 | + | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| SS52_RS06835 () | 1396704..1397078 | + | 375 | WP_001280954.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| SS52_RS06840 () | 1397125..1397499 | + | 375 | WP_000854914.1 | TA system toxin CbtA family protein | Toxin Detail |
| SS52_RS06845 () | 1397496..1397987 | + | 492 | WP_000976853.1 | hypothetical protein | - |
| SS52_RS06850 () | 1397999..1398196 | + | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| SS52_RS06855 () | 1398281..1399123 | + | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| SS52_RS06865 () | 1399594..1400532 | + | 939 | WP_000351284.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| SS52_RS06870 () | 1400587..1401324 | + | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| SS52_RS06875 () | 1401348..1401902 | + | 555 | WP_001001917.1 | molecular chaperone YcdY | - |
| SS52_RS06880 () | 1402004..1402495 | + | 492 | WP_001301587.1 | DUF1097 domain-containing protein | - |
| SS52_RS06885 () | 1402559..1403392 | - | 834 | WP_001189328.1 | hypothetical protein | VF |
| SS52_RS06890 () | 1403419..1403835 | - | 417 | WP_001264088.1 | hypothetical protein | VF |
| SS52_RS06895 () | 1403860..1404249 | - | 390 | WP_000833288.1 | hypothetical protein | VF |
| SS52_RS06900 () | 1404254..1404904 | - | 651 | WP_000481500.1 | hypothetical protein | VF |
| SS52_RS06910 () | 1405658..1406113 | + | 456 | WP_000791650.1 | hypothetical protein | VF |
| SS52_RS06915 () | 1406154..1406612 | + | 459 | WP_000771428.1 | hypothetical protein | VF |
| SS52_RS06920 () | 1406671..1407003 | + | 333 | WP_000992818.1 | hypothetical protein | VF |
| SS52_RS06925 () | 1407124..1407435 | + | 312 | WP_000489578.1 | type 1 fimbrial protein | - |
| SS52_RS06930 () | 1407530..1408063 | + | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| SS52_RS06935 () | 1408005..1409486 | + | 1482 | WP_010917790.1 | cardiolipin synthase ClsC | - |
| SS52_RS06940 () | 1409494..1410651 | - | 1158 | WP_001070358.1 | glucans biosynthesis protein MdoC | - |
| SS52_RS06950 () | 1411044..1412579 | + | 1536 | WP_001300662.1 | glucans biosynthesis protein MdoG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20353 | NC_002695 | 1453354..1465636 | 0 |