MGE detailed information
MGE type: Genomic_island MGE length: 13057 bp
Accession: NZ_CP085060 Location: 1784689..1797745 Organism: Escherichia coli strain P30_L1_05.20 Replicon: chromosome
Accession: NZ_CP085060 Location: 1784689..1797745 Organism: Escherichia coli strain P30_L1_05.20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH369_RS08415 (1780967) | 1780967..1781872 | + | 906 | WP_023149949.1 | diguanylate cyclase regulator RdcB family protein | - |
| LH369_RS08420 (1781869) | 1781869..1782939 | + | 1071 | WP_000102669.1 | patatin-like phospholipase family protein | - |
| LH369_RS08425 (1783044) | 1783044..1783199 | - | 156 | WP_001415943.1 | hypothetical protein | - |
| LH369_RS08430 (1783279) | 1783279..1784097 | + | 819 | WP_001234682.1 | DUF932 domain-containing protein | - |
| LH369_RS08435 (1784188) | 1784188..1784673 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| LH369_RS08440 (1784689) | 1784689..1785165 | + | 477 | WP_001186738.1 | RadC family protein | - |
| LH369_RS08445 (1785228) | 1785228..1785449 | + | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| LH369_RS08450 (1785612) | 1785612..1785986 | + | 375 | WP_001280955.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LH369_RS08455 (1786033) | 1786033..1786407 | + | 375 | WP_000854914.1 | TA system toxin CbtA family protein | Toxin Detail |
| LH369_RS08460 (1786404) | 1786404..1786895 | + | 492 | WP_000976857.1 | DUF5983 family protein | - |
| LH369_RS08465 (1786907) | 1786907..1787104 | + | 198 | WP_032278113.1 | DUF957 domain-containing protein | - |
| LH369_RS08470 (1787189) | 1787189..1788031 | + | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| LH369_RS08480 (1788502) | 1788502..1789440 | + | 939 | WP_000351317.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| LH369_RS08485 (1789495) | 1789495..1790232 | + | 738 | WP_000283667.1 | zinc-binding phosphatase | - |
| LH369_RS08490 (1790256) | 1790256..1790810 | + | 555 | WP_001001921.1 | molecular chaperone YcdY | - |
| LH369_RS08495 (1790912) | 1790912..1791403 | + | 492 | WP_001300785.1 | DUF1097 domain-containing protein | - |
| LH369_RS08500 (1791467) | 1791467..1792300 | - | 834 | WP_001189321.1 | hypothetical protein | VF |
| LH369_RS08505 (1792327) | 1792327..1792743 | - | 417 | WP_001264088.1 | hypothetical protein | VF |
| LH369_RS08510 (1792768) | 1792768..1793157 | - | 390 | WP_000833288.1 | hypothetical protein | VF |
| LH369_RS08515 (1793162) | 1793162..1793812 | - | 651 | WP_000481509.1 | HTH-type transcriptional regulator MalT | VF |
| LH369_RS08520 (1794163) | 1794163..1794860 | + | 698 | WP_223350503.1 | IS1 family transposase IS1X2 | Transposase |
| LH369_RS08525 (1795343) | 1795343..1795798 | + | 456 | WP_000791650.1 | hypothetical protein | VF |
| LH369_RS08530 (1795839) | 1795839..1796294 | + | 456 | WP_000771437.1 | hypothetical protein | VF |
| LH369_RS08535 (1796353) | 1796353..1796685 | + | 333 | WP_001094300.1 | hypothetical protein | VF |
| LH369_RS08540 (1796806) | 1796806..1797117 | + | 312 | WP_000489587.1 | protein YmdA | - |
| LH369_RS08545 (1797212) | 1797212..1797745 | + | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| LH369_RS08550 (1797687) | 1797687..1799168 | + | 1482 | WP_001307714.1 | cardiolipin synthase ClsC | - |
| LH369_RS08555 (1799176) | 1799176..1800333 | - | 1158 | WP_001070375.1 | glucans biosynthesis protein MdoC | - |
| LH369_RS08560 (1800727) | 1800727..1802262 | + | 1536 | WP_001343212.1 | glucans biosynthesis protein MdoG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20353 | NC_002695 | 1453354..1465636 | 0.01 |