MGE detailed information
MGE type: Genomic_island MGE length: 12280 bp
Accession: NZ_CP101292 Location: 2438280..2450559 Organism: Escherichia coli strain 2003-3014 Replicon: chromosome
Accession: NZ_CP101292 Location: 2438280..2450559 Organism: Escherichia coli strain 2003-3014 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMK58_RS12425 (2434558) | 2434558..2435463 | + | 906 | WP_000203541.1 | diguanylate cyclase regulator RdcB family protein | - |
| NMK58_RS12430 (2435460) | 2435460..2436530 | + | 1071 | WP_000102669.1 | patatin-like phospholipase family protein | - |
| NMK58_RS12435 (2436870) | 2436870..2437688 | + | 819 | WP_001234682.1 | DUF932 domain-containing protein | - |
| NMK58_RS12440 (2437779) | 2437779..2438264 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| NMK58_RS12445 (2438280) | 2438280..2438756 | + | 477 | WP_001186738.1 | RadC family protein | - |
| NMK58_RS12450 (2438819) | 2438819..2439040 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| NMK58_RS12455 (2439203) | 2439203..2439577 | + | 375 | WP_001280953.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NMK58_RS12460 (2439624) | 2439624..2439998 | + | 375 | WP_000854914.1 | TA system toxin CbtA family protein | Toxin Detail |
| NMK58_RS12465 (2439995) | 2439995..2440486 | + | 492 | WP_000976857.1 | DUF5983 family protein | - |
| NMK58_RS12470 (2440498) | 2440498..2440695 | + | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| NMK58_RS12475 (2440780) | 2440780..2441622 | + | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| NMK58_RS12485 (2442093) | 2442093..2443031 | + | 939 | WP_000351317.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| NMK58_RS12490 (2443086) | 2443086..2443823 | + | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| NMK58_RS12495 (2443847) | 2443847..2444401 | + | 555 | WP_001001902.1 | molecular chaperone YcdY | - |
| NMK58_RS12500 (2444503) | 2444503..2444994 | + | 492 | WP_001297187.1 | DUF1097 domain-containing protein | - |
| NMK58_RS12505 (2445058) | 2445058..2445891 | - | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| NMK58_RS12510 (2445918) | 2445918..2446334 | - | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| NMK58_RS12515 (2446359) | 2446359..2446748 | - | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| NMK58_RS12520 (2446753) | 2446753..2447403 | - | 651 | WP_000481500.1 | CsgBAC operon transcriptional regulatory protein | VF |
| NMK58_RS12525 (2448157) | 2448157..2448612 | + | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| NMK58_RS12530 (2448653) | 2448653..2449108 | + | 456 | WP_000771437.1 | Major curlin subunit | VF |
| NMK58_RS12535 (2449167) | 2449167..2449499 | + | 333 | WP_000992834.1 | Curli assembly protein CsgC | VF |
| NMK58_RS12540 (2449620) | 2449620..2449931 | + | 312 | WP_000489590.1 | protein YmdA | - |
| NMK58_RS12545 (2450026) | 2450026..2450559 | + | 534 | WP_000857399.1 | O-acetyl-ADP-ribose deacetylase | - |
| NMK58_RS12550 (2450501) | 2450501..2451982 | + | 1482 | WP_001307714.1 | cardiolipin synthase ClsC | - |
| NMK58_RS12555 (2451990) | 2451990..2453147 | - | 1158 | WP_001070350.1 | glucans biosynthesis protein MdoC | - |
| NMK58_RS12560 (2453541) | 2453541..2455076 | + | 1536 | WP_001300662.1 | glucans biosynthesis protein MdoG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20353 | NC_002695 | 1453354..1465636 | 0.01 |