SecReT4
Type F T4SSs

#NameOrganism Replicon Location Function
1Tra_F Acidithiobacillus ferrivorans SS3 chromosome [NC_015942] 2915918..2934238; 2967379..2985775 NA
2Tra_F Acidithiobacillus ferrooxidans ATCC 23270 chromosome [NC_011761] 943788..991827 NA
3Tra_F Acidovorax sp. JS42 chromosome [NC_008782] 1578073..1604431 NA
4Tra_F Acidovorax sp. JS42 plasmid pAOVO01 [NC_008765] 2127..31054 NA
5Tra_F Acinetobacter baumannii ACICU plasmid pACICU2 [NC_010606] 26558..58887 conjugation
6Tra_F experimental Aeromonas hydrophila plasmid pRA1 (NC_012885) plasmid pRA1 [NC_012885] 43775..71839; 131026..140667 conjugation
7Tra_F Aeromonas salmonicida subsp. salmonicida A449 plasmid 5 [NC_009350] 22598..48068; 121325..127877 NA
8Tra_F Alicycliphilus denitrificans K601 plasmid pALIDE201 [NC_015423] 396..29360 NA
9Tra_F Aliivibrio salmonicida LFI1238 plasmid pVSAL840 [NC_011311] 111..27827 conjugation
10Tra_F Aromatoleum aromaticum EbN1 plasmid 1 [NC_006823] 76806..102339 NA
11Tra_F Aromatoleum aromaticum EbN1 chromosome [NC_006513] 3914540..3934942 NA
12Tra_F Asticcacaulis excentricus CB 48 plasmid pASTEX02 (NC_014819) plasmid pASTEX02 [NC_014819] 43117..53707; 77866..98235 NA
13Tra_F Burkholderia cenocepacia HI2424 plasmid 1 [NC_008545] 1389..27585; 157460..162469 NA
14Tra_F Burkholderia cenocepacia J2315 plasmid pBCJ2315 [NC_011003] 26157..65064 NA
15Tra_F Burkholderia gladioli BSR3 plasmid bgla_2p [NC_015377] 20032..63223 NA
16Tra_F Burkholderia gladioli BSR3 plasmid bgla_3p [NC_015378] 70554..104725 NA
17Tra_F Burkholderia glumae BGR1 plasmid bglu_3p [NC_012720] 18630..61409 NA
18Tra_F Burkholderia glumae BGR1 plasmid bglu_4p [NC_012725] 21925..64332 NA
19Tra_F Burkholderia multivorans ATCC 17616 plasmid pBMUL01 [NC_010070] 50998..56971; 72065..97091 NA
20Tra_F Burkholderia multivorans ATCC 17616 plasmid pTGL1 [NC_010802] 16326..41421; 56515..62488 NA
21Tra_F Burkholderia rhizoxinica HKI 454 plasmid pBRH02 [NC_014723] 48695..75849 NA
22Tra_F Burkholderia vietnamiensis G4 plasmid pBVIE01 [NC_009230] 49..1712; 126223..158355 NA
23Tra_F Campylobacter jejuni subsp. doylei 269.97 chromosome [NC_009707] 824881..859566 NA
24Tra_F Candidatus Protochlamydia amoebophila UWE25 chromosome [NC_005861] 1697757..1716241 conjugation
25Tra_F Dechloromonas aromatica RCB chromosome [NC_007298] 2486033..2513898 NA
26Tra_F Dechloromonas aromatica RCB chromosome [NC_007298] 2841019..2861223 NA
27Tra_F Denitrovibrio acetiphilus DSM 12809 chromosome [NC_013943] 564166..578209; 603634..613175 NA
28Tra_F Enterobacter asburiae LF7a plasmid pENTAS01 [NC_015963] 47368..87173 NA
29Tra_F Enterobacter cloacae plasmid pEC-IMP (NC_012555) plasmid pEC-IMP [NC_012555] 1998..11636; 30622..39405; 199961..218499 NA
30Tra_F Enterobacter cloacae plasmid pEC-IMPQ (NC_012556) plasmid pEC-IMPQ [NC_012556] 1998..11636; 30622..39405; 205682..224220 NA
31Tra_F Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A [NC_014107] 3511..4281; 95497..130881 NA
32Tra_F Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B [NC_014108] 30751..50838; 70040..81295 NA
33Tra_F Enterobacter sp. 638 plasmid pENTE01 [NC_009425] 106444..144770 NA
34Tra_F Erwinia billingiae Eb661 plasmid pEB170 [NC_014305] 131075..167815 NA
35Tra_F Erwinia tasmaniensis Et1/99 plasmid pET45 [NC_010699] 2092..31261 NA
36Tra_F Erythrobacter litoralis HTCC2594 chromosome [NC_007722] 866799..903739 NA
37Tra_F Erythrobacter litoralis HTCC2594 chromosome [NC_007722] 2956825..2962065; 2980976..2998287 NA
38Tra_F Erythrobacter litoralis HTCC2594 chromosome [NC_007722] 186960..220140 NA
39Tra_F Escherichia coli 1520 plasmid pIP1206 (NC_010558) plasmid pIP1206 [NC_010558] 37256..69612 conjugation
40Tra_F Escherichia coli 53638 plasmid p53638_226 (NC_010719) plasmid p53638_226 [NC_010719] 69337..102753 NA
41Tra_F Escherichia coli 53638 plasmid p53638_75 (NC_010720) plasmid p53638_75 [NC_010720] 121..9116; 51620..73679 NA
42Tra_F Escherichia coli APEC O1 plasmid pAPEC-O1-R [NC_009838] 1998..11636; 31511..40294; 159533..177838 conjugation
43Tra_F Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM [NC_009837] 17533..50594 NA
44Tra_F Escherichia coli ETEC 1392/75 plasmid p1081 (NC_014232) plasmid p1081 [NC_014232] 11849..28363 NA
45Tra_F experimental Escherichia coli ETEC H10407 plasmid pEntH10407 (NC_013507) plasmid pEntH10407 [NC_013507] 45141..66811 conjugation
46Tra_F Escherichia coli O111:H- str. 11128 plasmid pO111_1 [NC_013365] 2230..11803; 29582..45087; 136313..154519 NA
47Tra_F Escherichia coli O111:H- str. 11128 plasmid pO111_3 [NC_013366] 43755..64053 NA
48Tra_F Escherichia coli O127:H6 str. E2348/69 plasmid pMAR2 [NC_011603] 36134..69183 NA
49Tra_F Escherichia coli O26:H11 str. 11368 plasmid pO26_2 [NC_013362] 23657..58665 NA
50Tra_F Escherichia coli plasmid NR1 (NC_009133) plasmid NR1 [NC_009133] 49964..84510 NA
51Tra_F Escherichia coli plasmid p1658/97 (NC_004998) plasmid p1658/97 [NC_004998] 1541..34695 conjugation
52Tra_F Escherichia coli plasmid pAPEC-O2-ColV (NC_007675) plasmid pAPEC-O2-ColV [NC_007675] 6566..39443 NA
53Tra_F Escherichia coli plasmid pAPEC-O2-R (NC_006671) plasmid pAPEC-O2-R [NC_006671] 7540..40351 conjugation
54Tra_F Escherichia coli plasmid pAR060302 (NC_012692) plasmid pAR060302 [NC_012692] 48097..80693; 155402..163413 conjugation
55Tra_F Escherichia coli plasmid pC15-1a (NC_005327) plasmid pC15-1a [NC_005327] 49913..84029 NA
56Tra_F Escherichia coli plasmid pEC14_114 (NC_013175) plasmid pEC14_114 [NC_013175] 76876..111301 conjugation
57Tra_F Escherichia coli plasmid pEC_B24 (NC_014382) plasmid pEC_B24 [NC_014382] 6567..22947 conjugation
58Tra_F Escherichia coli plasmid pEC_L46 (NC_014385) plasmid pEC_L46 [NC_014385] 54279..71591 conjugation
59Tra_F Escherichia coli plasmid pEC_L8 (NC_014384) plasmid pEC_L8 [NC_014384] 45099..77556 conjugation
60Tra_F Escherichia coli plasmid pETN48 (NC_014615) plasmid pETN48 [NC_014615] 1574..35145 NA
61Tra_F Escherichia coli plasmid pHK17a (NC_016039) plasmid pHK17a [NC_016039] 32239..66545 NA
62Tra_F Escherichia coli plasmid pMAR7 (NC_010862) plasmid pMAR7 [NC_010862] 41088..74137 conjugation
63Tra_F Escherichia coli plasmid pO26-L (NC_011812) plasmid pO26-L [NC_011812] 26689..63924 NA
64Tra_F Escherichia coli plasmid pO86A1 (NC_008460) plasmid pO86A1 [NC_008460] 64343..97327 NA
65Tra_F Escherichia coli plasmid pSFO157 (NC_009602) plasmid pSFO157 [NC_009602] 87969..121185 conjugation
66Tra_F Escherichia coli plasmid pVM01 (NC_010409) plasmid pVM01 [NC_010409] 93994..127662 conjugation
67Tra_F Escherichia coli S88 plasmid pECOS88 [NC_011747] 48716..80510 NA
68Tra_F Escherichia coli SE11 plasmid pSE11-2 [NC_011413] 39151..72102 NA
69Tra_F Escherichia coli SMS-3-5 plasmid pSMS35_130 [NC_010488] 5088..37805 conjugation
70Tra_F Escherichia coli UMN026 plasmid p1ESCUM [NC_011749] 56192..91970 NA
71Tra_F Escherichia coli UTI89 plasmid pUTI89 [NC_007941] 76883..111309 NA
72Tra_F Escherichia coli Vir68 plasmid pVir68 (NC_012944) plasmid pVir68 [NC_012944] 56097..89060 NA
73Tra_F Geobacter lovleyi SZ chromosome [NC_010814] 227290..233660; 283987..297466 NA
74Tra_F Klebsiella pneumoniae plasmid pc15-k (NC_015154) plasmid pc15-k [NC_015154] 59148..94872 NA
75Tra_F Klebsiella pneumoniae plasmid pK29 (NC_010870) plasmid pK29 [NC_010870] 855..10466; 29452..38235; 156213..174751 conjugation
76Tra_F Klebsiella pneumoniae plasmid pKF3-140 (NC_013951) plasmid pKF3-140 [NC_013951] 70476..103624 NA
77Tra_F Klebsiella pneumoniae plasmid pKF3-70 (NC_013542) plasmid pKF3-70 [NC_013542] 18651..52966 NA
78Tra_F Klebsiella pneumoniae plasmid pKF3-94 (NC_013950) plasmid pKF3-94 [NC_013950] 48804..83693 NA
79Tra_F Klebsiella pneumoniae plasmid pKP048 (NC_014312) plasmid pKP048 [NC_014312] 93240..127916 NA
80Tra_F Klebsiella pneumoniae plasmid pKpQIL (NC_014016) plasmid pKpQIL [NC_014016] 77908..112972 NA
81Tra_F Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2 [NC_016846] 45949..80464 NA
82Tra_F Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN4 [NC_009650] 71740..106803 NA
83Tra_F Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3 [NC_009649] 139855..175106 NA
84Tra_F Legionella longbeachae NSW150 chromosome [NC_013861] 2158596..2179396 NA
85Tra_F Legionella longbeachae NSW150 plasmid pLLO [NC_014544] 12373..36323 NA
86Tra_F Legionella pneumophila str. Lens plasmid pLPL [NC_006366] 13334..34411 conjugation
87Tra_F Legionella pneumophila str. Paris plasmid pLPP [NC_006365] 18713..42715 NA
88Tra_F Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome [NC_002942] 2319208..2343410 NA
89Tra_F Methylibium petroleiphilum PM1 plasmid RPME01 [NC_008826] 300274..335666 conjugation
90Tra_F Neisseria gonorrhoeae NCCP11945 chromosome [NC_011035] 866326..886920 DNA release
91Tra_F Novosphingobium aromaticivorans DSM 12444 plasmid pNL1 [NC_009426] 147458..182408 NA
92Tra_F Novosphingobium aromaticivorans DSM 12444 chromosome [NC_007794] 2295560..2328365 NA
93Tra_F experimental Novosphingobium aromaticivorans plasmid pNL1 (NC_002033) plasmid pNL1 [NC_002033] 90847..125874 conjugation
94Tra_F Orientia tsutsugamushi str. Ikeda chromosome [NC_010793] 168769..219172 NA
95Tra_F Orientia tsutsugamushi str. Ikeda chromosome [NC_010793] 95834..136215 NA
96Tra_F Orientia tsutsugamushi str. Ikeda chromosome [NC_010793] 1942394..1963342 NA
97Tra_F Orientia tsutsugamushi str. Ikeda chromosome [NC_010793] 1847799..1871543 NA
98Tra_F Orientia tsutsugamushi str. Ikeda chromosome [NC_010793] 1729740..1740903 NA
99Tra_F Orientia tsutsugamushi str. Ikeda chromosome [NC_010793] 1506773..1531266 NA
100Tra_F Orientia tsutsugamushi str. Ikeda chromosome [NC_010793] 1162791..1185104 NA
101Tra_F Orientia tsutsugamushi str. Ikeda chromosome [NC_010793] 502015..511838 NA
102Tra_F Orientia tsutsugamushi str. Ikeda chromosome [NC_010793] 413970..438170 NA
103Tra_F Pantoea sp. At-9b plasmid pPAT9B02 (NC_014839) plasmid pPAT9B02 [NC_014839] 65..8490; 228257..229033; 366626..391496 NA
104Tra_F Pantoea sp. At-9b plasmid pPAT9B05 (NC_014842) plasmid pPAT9B05 [NC_014842] 56445..92104 NA
105Tra_F Parvularcula bermudensis HTCC2503 chromosome [NC_014414] 8800..46320 NA
106Tra_F Pelobacter propionicus DSM 2379 plasmid pPRO1 [NC_008607] 131819..178811 NA
107Tra_F Pelobacter propionicus DSM 2379 chromosome [NC_008609] 239259..257606 NA
108Tra_F Persephonella marina EX-H1 plasmid unnamed [NC_012439] 972..36140 NA
109Tra_F Photobacterium damselae subsp. piscicida plasmid pP91278 (NC_008613) plasmid pP91278 [NC_008613] 27312..55478; 100711..108734 conjugation
110Tra_F Photobacterium damselae subsp. piscicida plasmid pP99-018 (NC_008612) plasmid pP99-018 [NC_008612] 32858..61024; 106276..114299 conjugation
111Tra_F Photobacterium profundum SS9 plasmid pPBPR1 [NC_005871] 317..29434 NA
112Tra_F experimental Plasmid F plasmid F [NC_002483] 65556..98709 Conjugation
113Tra_F Plasmid R100 plasmid R100 [NC_002134] 49965..84502 NA
114Tra_F Proteus mirabilis HI4320 chromosome [NC_010554] 2653922..2661726; 2682565..2704628 conjugation
115Tra_F Proteus vulgaris plasmid Rts1 (NC_003905) plasmid Rts1 [NC_003905] 137437..158579; 174795..186259 conjugation
116Tra_F Pseudomonas putida plasmid pDK1 (NC_014124) plasmid pDK1 [NC_014124] 21381..70422 conjugation
117Tra_F Pseudomonas resinovorans plasmid pCAR1 (NC_004444) plasmid pCAR1 [NC_004444] 110463..163703 NA
118Tra_F Rhodobacter sphaeroides 2.4.1 plasmid D [NC_007490] 67635..85247 NA
119Tra_F Rickettsia bellii OSU 85-389 chromosome [NC_009883] 1053993..1077641 NA
120Tra_F Rickettsia bellii RML369-C chromosome [NC_007940] 470665..494313 conjugation
121Tra_F Rickettsia massiliae MTU5 chromosome [NC_009900] 710788..735615 conjugation
122Tra_F Salmonella enterica plasmid pAM04528 (NC_012693) plasmid pAM04528 [NC_012693] 46409..60809; 81520..90637; 147086..155097 conjugation
123Tra_F Salmonella enterica plasmid pOU1113 (NC_007208) plasmid pOU1113 [NC_007208] 27307..53563 NA
124Tra_F Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1 (NC_009981) plasmid pMAK1 [NC_009981] 14492..27370; 126302..143195; 195510..205083 NA
125Tra_F Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188 plasmid pCVM29188_146 (NC_011076) plasmid pCVM29188_146 [NC_011076] 20476..52320 NA
126Tra_F experimental Salmonella enterica subsp. enterica serovar Newport str. SL254 plasmid pSN254 [NC_009140] 46409..58864; 81520..90637; 165346..173357 conjugation
127Tra_F Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSLT-BT (NC_013437) plasmid pSLT-BT [NC_013437] 79914..113004 NA
128Tra_F Salmonella enterica subsp. enterica serovar Typhimurium plasmid pYT1 (NC_014476) plasmid pYT1 [NC_014476] 76009..109099 NA
129Tra_F Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 plasmid pSLT [NC_003277] 60129..93300 NA
130Tra_F experimental Salmonella enterica subsp. enterica serovar Typhi plasmid R27 (NC_002305) plasmid R27 [NC_002305] 2116..10886; 28465..38038; 101815..118708 conjugation
131Tra_F Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1 [NC_003384] 44356..53929; 71193..84072; 190873..207765 conjugation
132Tra_F Serratia marcescens plasmid R478 (NC_005211) plasmid R478 [NC_005211] 2025..11636; 29556..38339; 179083..197621 NA
133Tra_F Shewanella baltica OS185 plasmid pS18501 [NC_009661] 41601..68320 NA
134Tra_F Shewanella baltica OS195 plasmid pS19502 [NC_009999] 18839..45525 NA
135Tra_F Shewanella baltica OS195 plasmid pS19501 [NC_009998] 573..17620; 67266..75604 NA
136Tra_F Shewanella baltica OS223 plasmid pS22301 [NC_011664] 39422..65618 NA
137Tra_F Shewanella baltica OS223 plasmid pS22302 [NC_011668] 3829..31586 NA
138Tra_F Shewanella baltica OS223 plasmid pS22303 [NC_011665] 18469..45433 NA
139Tra_F Shewanella sp. ANA-3 plasmid 1 [NC_008573] 68453..92450; 134681..155239 NA
140Tra_F experimental Shewanella sp. W3-18-1 chromosome [NC_008750] 1248113..1258339; 1288318..1297395; 1323458..1331262 conjugation
141Tra_F Shigella sonnei plasmid pEG356 (NC_013727) plasmid pEG356 [NC_013727] 32214..66760 NA
142Tra_F Sphingobium japonicum UT26S plasmid pCHQ1 [NC_014007] 79698..100474 NA
143Tra_F Sphingomonas sp. KA1 plasmid pCAR3 (NC_008308) plasmid pCAR3 [NC_008308] 120339..151491 NA
144Tra_F Sphingomonas wittichii RW1 plasmid pSWIT01 [NC_009507] 50996..56346; 113404..118729; 269613..291833 NA
145Tra_F Syntrophus aciditrophicus SB chromosome [NC_007759] 1740702..1765815 conjugation
146Tra_F Vibrio cholerae MJ-1236 chromosome 1 [NC_012668] 2962770..2970574; 2988974..3018443 conjugation
147Tra_F Vibrio nigripulchritudo plasmid VIBNI_pA (NC_015156) plasmid VIBNI_pA [NC_015156] 114682..139157 NA
148Tra_F experimental Vibrio tapetis plasmid pVT1 (NC_010614) plasmid pVT1 [NC_010614] 4062..37792 conjugation
149Tra_F Vibrio vulnificus CMCP6 chromosome II [NC_004460] 682882..721744 NA
150Tra_F experimental Vibrio vulnificus plasmid pC4602-1 (NC_009702) plasmid pC4602-1 [NC_009702] 20379..49553 conjugation
151Tra_F Vibrio vulnificus YJ016 plasmid pYJ016 [NC_005128] 1648..28855 conjugation
152Tra_F experimental Yersinia enterocolitica plasmid pYE854 (NC_010377) plasmid pYE854 [NC_010377] 15280..24200; 54838..74069 conjugation
153Tra_F experimental Yersinia pestis biovar Orientalis str. IP275 plasmid pIP1202 (NC_009141) plasmid pIP1202 [NC_009141] 64226..92392; 171785..179796 conjugation
154Tra_F Yersinia pestis Pestoides F plasmid MT [NC_009378] 83962..112172 NA
155Tra_F Yersinia pestis plasmid pG8786 (NC_006323) plasmid pG8786 [NC_006323] 82124..110255 conjugation
156Tra_F experimental Yersinia ruckeri plasmid pYR1 (NC_009139) plasmid pYR1 [NC_009139] 49823..77989; 146831..154920 conjugation

experimental T4SS derived from experimental literature

Genomics & Bioinformatics Group in MML, SJTU