SecReT4
T4SS ID571
StrainEnterobacter cloacae plasmid pEC-IMPQ (NC_012556)
Repliconplasmid pEC-IMPQ [Browse all T4SS(s) in this replicon]
AccessionNC_012556
Location1998..11636; 30622..39405; 205682..224220
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number001

The information of T4SS components from NC_012556
Region 1: 1998..11636
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pEC-IMPQ_0011..876 [+], 876226809878RepHIA 
2pEC-IMPQ_0021998..2378 [+], 381226809879TrhA  TraA_F
3pEC-IMPQ_0032396..2746 [+], 351226809880TrhL  TraL_F
4pEC-IMPQ_0042758..3546 [+], 789226809881TrhE  TraE_F
5pEC-IMPQ_0053543..4817 [+], 1275226809882TrhK  TraK_F
6pEC-IMPQ_0064819..5280 [+], 462226809883HtdO 
7pEC-IMPQ_0075258..6625 [+], 1368226809884TrhB  TraB_F
8pEC-IMPQ_0086633..7115 [+], 483226809885HtdV 
9pEC-IMPQ_0097129..7986 [+], 858226809886HtdT 
10pEC-IMPQ_0107996..8946 [+], 951226809887TrhV  TraV_F
11pEC-IMPQ_0118955..11636 [+], 2682226809888TrhC  TraC_F
 
Region 2: 30622..39405
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pEC-IMPQ_02330123..30635 [+], 513226809901TrhF 
2pEC-IMPQ_02430622..32133 [+], 1512226809902TrhW  TraW_F
3pEC-IMPQ_02532173..33333 [+], 1161226809903TrhU  TraU_F
4pEC-IMPQ_02633352..36540 [+], 3189226809904conjugal transfer mating pair stabilization protein TraN  TraN_F
5pEC-IMPQ_02736569..37441 [-], 873226809905hypothetical protein 
6pEC-IMPQ_02837621..39405 [+], 1785226809906TrhI  TraI_F
7pEC-IMPQ_02939800..40672 [+], 873226809907hypothetical protein 
8pEC-IMPQ_03040730..41107 [+], 378226809908hypothetical protein 
9pEC-IMPQ_03141168..42145 [+], 978226809909hypothetical protein 
10pEC-IMPQ_03242203..43261 [+], 1059226809910hypothetical protein 
11pEC-IMPQ_03343393..43566 [+], 174226809911hypothetical protein 
 
Region 3: 205682..224220
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pEC-IMPQ_191201020..202279 [+], 1260226810064MucB 
2pEC-IMPQ_192202325..203134 [-], 810226810065hypothetical protein 
3pEC-IMPQ_193203241..203852 [+], 612226810066hypothetical protein 
4pEC-IMPQ_194203912..204334 [-], 423226810067hypothetical protein 
5pEC-IMPQ_195204368..204766 [-], 399226810068hypothetical protein 
6pEC-IMPQ_196204785..205534 [-], 750226810069DsbC 
7pEC-IMPQ_197205682..206221 [+], 540226810070hypothetical protein  Orf169_F
8pEC-IMPQ_198206439..206861 [+], 423226810071hypothetical protein 
9pEC-IMPQ_199206985..208046 [+], 1062226810072hypothetical protein 
10pEC-IMPQ_200208056..208562 [+], 507226810073hypothetical protein 
11pEC-IMPQ_201208685..212635 [-], 3951226810074TrhG  TraG_F
12pEC-IMPQ_202212644..214122 [-], 1479226810075TrhH  TraH_F
13pEC-IMPQ_203214049..215095 [-], 1047226810076TrhF  TraF_F
14pEC-IMPQ_204215687..216199 [-], 513226810077TrhY 
15pEC-IMPQ_205216201..217001 [-], 801226810078TrhR 
16pEC-IMPQ_206217761..218246 [+], 486226810079TraH 
17pEC-IMPQ_207218243..218980 [+], 738226810080hypothetical protein 
18pEC-IMPQ_208218984..222136 [+], 3153226810081TraI 
19pEC-IMPQ_209222136..224220 [+], 2085226810082TraG  TraD_F
20pEC-IMPQ_210224220..225329 [+], 1110226810083hypothetical protein 
21pEC-IMPQ_211225316..225978 [+], 663226810084TraJ 
22pEC-IMPQ_212225989..227170 [+], 1182226810085hypothetical protein 
23pEC-IMPQ_213227172..227903 [+], 732226810086hypothetical protein 
24pEC-IMPQ_214228190..228543 [-], 354226810087hypothetical protein 
25pEC-IMPQ_215228609..228893 [-], 285226810088hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_012556

Genomics & Bioinformatics Group in MML, SJTU