The information of T4SS components from NC_012439 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | PERMA_A0001 | 113..892 [+], 780 | 225685374 | hypothetical protein | | |
| 2 | PERMA_A0002 | 972..2924 [+], 1953 | 225685384 | hypothetical protein | TraD_F | |
| 3 | PERMA_A0003 | 2911..3087 [+], 177 | 225685372 | hypothetical protein | | |
| 4 | PERMA_A0005 | 3084..3803 [+], 720 | 225685376 | hypothetical protein | | |
| 5 | PERMA_A0004 | 3787..4362 [-], 576 | 225685377 | hypothetical protein | | |
| 6 | PERMA_A0006 | 4349..4894 [-], 546 | 225685404 | hypothetical protein | | |
| 7 | PERMA_A0007 | 4940..5056 [-], 117 | 225685368 | hypothetical protein | | |
| 8 | PERMA_A0008 | 5151..5720 [-], 570 | 225685342 | hypothetical protein | | |
| 9 | PERMA_A0009 | 5879..6067 [-], 189 | 225685351 | hypothetical protein | | |
| 10 | PERMA_A0010 | 6064..6372 [-], 309 | 225685360 | hypothetical protein | | |
| 11 | PERMA_A0011 | 6369..7094 [-], 726 | 225685357 | DNA replication protein DnaC | | |
| 12 | PERMA_A0012 | 7112..8011 [-], 900 | 225685340 | putative integrase/recombinase | | |
| 13 | PERMA_A0013 | 8008..8484 [-], 477 | 225685350 | hypothetical protein | | |
| 14 | PERMA_A0014 | 8497..9612 [-], 1116 | 225685341 | hypothetical protein | | |
| 15 | PERMA_A0015 | 9609..9824 [-], 216 | 225685406 | hypothetical protein | | |
| 16 | PERMA_A0016 | 9817..10356 [-], 540 | 225685345 | hypothetical protein | | |
| 17 | PERMA_A0017 | 10457..10873 [-], 417 | 225685346 | hypothetical protein | | |
| 18 | PERMA_A0018 | 10885..11199 [-], 315 | 225685352 | putative IQ calmodulin-binding motif family protein | | |
| 19 | PERMA_A0019 | 11386..13944 [-], 2559 | 225685356 | hypothetical protein | TraN_F | |
| 20 | PERMA_A0020 | 13923..14813 [-], 891 | 225685349 | putative lipoprotein | | |
| 21 | PERMA_A0021 | 14776..15339 [-], 564 | 225685358 | hypothetical protein | | |
| 22 | PERMA_A0022 | 15327..16043 [-], 717 | 225685390 | hypothetical protein | TrbC_F | |
| 23 | PERMA_A0023 | 16016..16990 [-], 975 | 225685401 | putative TraU | TraU_F | |
| 24 | PERMA_A0024 | 16974..17585 [-], 612 | 225685344 | hypothetical protein | TraW_F | |
| 25 | PERMA_A0025 | 17722..17928 [+], 207 | 225685402 | DNA-damage-inducible protein J | | |
| 26 | PERMA_A0026 | 17925..18545 [+], 621 | 225685391 | putative lipoprotein | | |
| 27 | PERMA_A0027 | 18551..19297 [+], 747 | 225685363 | hypothetical protein | | |
| 28 | PERMA_A0028 | 19300..19581 [-], 282 | 225685353 | hypothetical protein | | |
| 29 | PERMA_A0029 | 19578..19877 [-], 300 | 225685362 | hypothetical protein | | |
| 30 | PERMA_A0030 | 19879..20268 [-], 390 | 225685343 | hypothetical protein | | |
| 31 | PERMA_A0031 | 20265..23756 [-], 3492 | 225685392 | hypothetical protein | TraG_F | |
| 32 | PERMA_A0032 | 23761..25164 [-], 1404 | 225685378 | hypothetical protein | TraH_F | |
| 33 | PERMA_A0033 | 25166..26053 [-], 888 | 225685395 | hypothetical protein | TraF_F | |
| 34 | PERMA_A0034 | 26100..26471 [-], 372 | 225685399 | hypothetical protein | | |
| 35 | PERMA_A0035 | 26443..27828 [-], 1386 | 225685396 | hypothetical protein | | |
| 36 | PERMA_A0036 | 27803..28165 [-], 363 | 225685381 | hypothetical protein | | |
| 37 | PERMA_A0037 (traC) | 28176..30956 [-], 2781 | 225685407 | type-IV secretion system protein TraC | TraC_F | |
| 38 | PERMA_A0038 (traV) | 30946..31461 [-], 516 | 225685386 | type IV conjugative transfer system protein TraV | TraV_F | |
| 39 | PERMA_A0039 | 31458..32126 [-], 669 | 225685405 | thiol:disulfide interchange protein | | |
| 40 | PERMA_A0040 | 32116..32490 [-], 375 | 225685347 | hypothetical protein | | |
| 41 | PERMA_A0041 | 32502..32894 [-], 393 | 225685389 | putative lipoprotein | | |
| 42 | PERMA_A0042 | 32848..34098 [-], 1251 | 225685355 | TraB pilus assembly family protein | TraB_F | |
| 43 | PERMA_A0043 | 34079..34552 [-], 474 | 225685370 | bacteriolytic enzyme | | |
| 44 | PERMA_A0044 | 34549..35307 [-], 759 | 225685367 | hypothetical protein | | |
| 45 | PERMA_A0045 (traE) | 35294..35821 [-], 528 | 225685380 | type IV conjugative transfer system protein TraE | TraE_F | |
| 46 | PERMA_A0046 (traL) | 35844..36140 [-], 297 | 225685369 | type IV conjugative transfer system protein TraL | TraL_F | |
| 47 | PERMA_A0047 | 36165..36566 [-], 402 | 225685398 | hypothetical protein | | |
| 48 | PERMA_A0048 | 36738..37430 [+], 693 | 225685339 | hypothetical protein | | |
| 49 | PERMA_A0049 | 37513..38217 [-], 705 | 225685393 | hypothetical protein | | |
| 50 | PERMA_A0050 | 38374..38772 [-], 399 | 225685379 | hypothetical protein | | |
| 51 | PERMA_A0051 | 38777..39106 [-], 330 | 225685382 | hypothetical protein | | |
| 52 | PERMA_A0052 | 39148..39993 [-], 846 | 225685387 | antirestriction protein | | |
| 53 | PERMA_A0053 | 40084..40929 [-], 846 | 225685338 | hypothetical protein | | |
| 54 | PERMA_A0054 | 40948..41088 [-], 141 | 225685373 | hypothetical protein | | |
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T4SS ID
This T4SS is identified in this study.
Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.