| Protein ID: 225685407 |
 T4SS name [ID] | Tra_F [803] |
| Gene symbol | traC |
| Locus tag | PERMA_A0037 |
| Strain | Persephonella marina EX-H1 |
| Replicon | plasmid unnamed [GenBank: NC_012439] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 28176..30956 [-] |
| Product | type-IV secretion system protein TraC |
| Component type | TraC_F |
| UniProt ID | C0QUW6 |
| KEGG ID | pmx:PERMA_A0037 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | AAA_10 [PF12846], Evalue: 3.5e-50, Aligned region: 469..768 TraC_F_IV [PF11130], Evalue: 1.2e-19, Aligned region: 42..268 |
| Protein Sequence: 926 a.a. [Download] |
| >gi|225685407|ref|YP_002729765.1| type-IV secretion system protein TraC [Persephonella marina EX-H1] MITKIKELFLGENLEKYGTERRIINALIRNRVRAADYISVLEEKDNIFLTKEGFGFAFYLTLPAFLGQRQ EEAFETFLNHDYPDGTVINFMAFSSSNIKPFLDYWEQEHSAENVDIDNPGILKYIIKKRKEYLLNAVNNS FWEDVEAKPRIIYNIMSVHIPFESDNPDVVRIQFRRIRKLANRIREAIRAEGFGCDFANADMMLAIYKEI LNPELQGAIKYQKGLDFNRQVLDRNTTLRLVGGLESDLEVANDEKKKYWRGFWFSQYPNEMTLWKFSNIL FPYDDTNPSPIIPTDFFMCMQVKVEDIEKRQTKITAKAIQMQDQAEKSEFARWIPKIKRRGEYAKYIKEV IEDGKVPYSASMYLFISADNPEHLDDIASGAVQRFVSKKFKLAREIDASLFNVLMECLPLNQIKEREEFF INYSTLFDANIASLMPFQGTSLGSKRPITLYLDRKYSLWGFDPFHSDTNFNIVKIAASGGGKSFSENDFH VLNLSAGRKIRVIDIGWSYKPLCSLLGGEYIELDDERNPCFNPFTHIIEDEKGNIHEDELAVLIPFVGLL AGLDLNPEALISNEDNLMARYCSFIARAITNAYKSYGNKTGLKEVVEELQKLEDDTGDNIPQKLSQALYE FSHGHYARYFNGENNIHYSKDYVVLELEQIENKDPRLKQAILYSLILRIFREFFLAHLRKDYSRKFLVVD EAWSILRESKAGYFLETAARRFRKYGCSLVVITQKIEDLLASPATRAIYANSAHLMILKPSEQDIEDAKS EKRLPVSDFEKELILSLTTVPGKFSELIIRNSVLGTVVGRLIVDRYSYWTFTTNDAERRVRTELLEELKN YELVLETLAKRMPIGEILEKLGYITGEQKQLILWLQSNHPKYKGKLFGEIATELGFVSKEKVIEATEKQK NISLQLKQLVEAYKKK |
| Nucleotide Sequence: 2781 bp [Download] |
| >gi|225685337|ref|NC_012439.1|:c30956-28176 Persephonella marina EX-H1 plasmid unnamed, complete sequence ATGATAACTAAAATCAAGGAGCTGTTTTTAGGGGAAAATTTAGAAAAATACGGAACTGAAAGAAGAATAA TTAATGCTTTGATAAGAAACAGGGTAAGAGCCGCAGACTATATTTCTGTTTTGGAAGAAAAAGACAATAT ATTTCTGACCAAAGAAGGTTTTGGCTTTGCATTTTACTTGACACTTCCAGCTTTTCTTGGGCAAAGACAG GAAGAAGCCTTTGAGACATTCTTGAACCATGATTATCCAGACGGAACGGTAATAAACTTTATGGCTTTTT CATCTTCAAACATAAAGCCGTTTTTGGATTATTGGGAACAGGAGCATAGTGCTGAAAATGTAGATATAGA TAACCCCGGTATTCTGAAGTATATAATCAAAAAAAGAAAAGAATACCTGCTAAATGCTGTAAATAATAGC TTTTGGGAAGATGTAGAGGCAAAGCCAAGGATAATATACAACATCATGTCGGTTCATATTCCTTTTGAAA GCGATAATCCTGATGTGGTTAGGATACAATTCAGGAGAATAAGGAAACTTGCAAACAGAATAAGGGAAGC AATAAGGGCAGAAGGTTTCGGATGCGATTTTGCAAATGCTGATATGATGCTTGCAATTTACAAAGAGATA TTAAATCCAGAACTTCAAGGAGCTATTAAATATCAAAAGGGGCTTGATTTTAATAGACAGGTTCTTGACA GAAACACAACACTACGGCTTGTAGGTGGGCTGGAAAGTGATTTAGAGGTTGCAAATGATGAGAAAAAGAA ATACTGGAGAGGCTTCTGGTTTAGCCAGTATCCAAATGAAATGACATTGTGGAAATTTTCCAATATTTTG TTTCCTTATGATGATACTAATCCAAGTCCGATTATACCCACTGATTTTTTCATGTGTATGCAGGTCAAGG TAGAAGATATAGAAAAAAGGCAAACGAAAATAACCGCAAAAGCTATTCAAATGCAAGACCAAGCTGAAAA ATCAGAGTTTGCAAGATGGATACCAAAGATAAAAAGAAGGGGAGAGTATGCCAAGTATATAAAAGAAGTT ATAGAAGATGGTAAAGTTCCTTATAGTGCTTCCATGTATCTGTTTATAAGTGCAGATAACCCAGAGCATT TAGATGATATAGCCTCTGGAGCTGTTCAAAGATTTGTTTCAAAGAAATTTAAGCTTGCAAGGGAAATAGA TGCCTCACTTTTCAATGTATTGATGGAATGTTTACCCTTAAACCAGATAAAAGAAAGAGAAGAATTTTTT ATTAACTATTCCACTTTGTTTGATGCAAATATAGCTTCCTTAATGCCATTTCAAGGGACAAGTTTAGGTT CTAAAAGACCAATAACTCTATATCTGGATAGGAAATACAGCCTTTGGGGATTTGACCCTTTTCATTCAGA CACAAATTTCAATATCGTAAAGATAGCCGCTTCTGGTGGTGGTAAATCTTTCTCGGAAAATGACTTCCAC GTGCTTAATCTGTCAGCTGGTAGAAAAATAAGAGTTATAGATATAGGATGGTCCTATAAACCACTTTGTA GTCTTTTAGGTGGTGAGTATATAGAACTTGATGATGAGAGAAACCCTTGTTTTAATCCATTTACTCATAT TATTGAAGATGAAAAAGGAAATATCCATGAAGATGAACTTGCCGTATTAATCCCATTTGTCGGACTACTT GCAGGTTTAGATTTAAATCCTGAAGCTCTCATATCAAATGAAGATAACTTAATGGCAAGATATTGTTCAT TCATAGCAAGGGCTATTACAAATGCTTATAAAAGCTACGGCAACAAAACAGGTCTGAAAGAAGTAGTTGA GGAACTGCAAAAACTTGAAGATGATACTGGAGACAATATTCCACAAAAACTATCTCAAGCCTTGTATGAG TTTTCACATGGGCATTATGCAAGATATTTCAATGGTGAAAATAATATCCACTATTCAAAGGATTATGTTG TATTAGAACTTGAACAGATAGAAAACAAAGACCCAAGGCTAAAACAGGCTATTCTTTATTCATTAATACT ACGGATATTTAGAGAATTTTTCCTTGCACATTTAAGGAAAGACTACTCAAGAAAATTCCTTGTCGTTGAC GAGGCGTGGTCAATTTTAAGAGAGAGCAAAGCTGGATATTTCCTTGAAACAGCTGCAAGAAGATTTAGAA AGTATGGTTGTTCTCTTGTAGTTATTACACAGAAAATAGAGGACTTGCTTGCTTCTCCAGCGACAAGGGC AATATATGCAAACTCTGCACATCTTATGATACTAAAGCCTTCGGAACAGGATATTGAGGATGCAAAGAGT GAAAAAAGGCTTCCTGTATCTGATTTTGAAAAGGAACTGATACTATCTCTTACTACCGTTCCAGGGAAGT TTTCGGAGTTAATCATAAGAAACTCTGTTCTGGGAACTGTTGTAGGTAGGTTAATAGTTGACAGATACTC ATACTGGACATTTACGACGAACGATGCTGAAAGAAGAGTTAGAACCGAATTATTGGAAGAATTGAAAAAC TATGAGCTTGTTCTGGAAACACTGGCTAAAAGAATGCCGATAGGGGAGATACTGGAAAAACTTGGATACA TTACTGGAGAACAAAAACAGCTAATTTTATGGCTTCAATCCAATCATCCAAAATATAAGGGTAAGCTATT TGGAGAAATAGCTACTGAACTTGGGTTCGTCAGCAAAGAAAAGGTTATAGAAGCAACAGAAAAACAAAAA AACATATCACTCCAGCTAAAACAACTTGTAGAAGCCTATAAGAAGAAGTAG |