SecReT4

T4SS
References

T4SS ID	602
Strain	Denitrovibrio acetiphilus DSM 12809
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_013943
Location	564166..578209; 603634..613175
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	1	1	1	1	1	0	1	0
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	0	1	0	1	0	1	1	0	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	0

The information of T4SS components from NC_013943
Region 1: 564166..578209

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Dacet_0545	559438..559674 [+], 237	291286483	hypothetical protein
2	Dacet_0546	559674..559883 [+], 210	291286484	XRE family transcriptional regulator
3	Dacet_0547	559933..560877 [+], 945	291286485	hypothetical protein
4	Dacet_0548	560866..562083 [-], 1218	291286486	transposase mutator type
5	Dacet_0549	562179..562505 [-], 327	291286487	hypothetical protein
6	Dacet_0550	562507..563718 [-], 1212	291286488	hypothetical protein
7	Dacet_0551	563867..564166 [+], 300	291286489	hypothetical protein
8	Dacet_0552	564166..564435 [+], 270	291286490	type IV conjugative transfer system protein TraL	TraL_F
9	Dacet_0553	564438..564995 [+], 558	291286491	hypothetical protein	TraE_F
10	Dacet_0554	564992..565705 [+], 714	291286492	hypothetical protein
11	Dacet_0555	565702..566877 [+], 1176	291286493	TraB pilus assembly family protein	TraB_F
12	Dacet_0556	566856..567263 [+], 408	291286494	Type IV conjugative transfer system protein TraV	TraV_F
13	Dacet_0557	567260..570034 [+], 2775	291286495	sex pilus assembly protein	TraC_F
14	Dacet_0558	570049..570333 [+], 285	291286496	hypothetical protein
15	Dacet_0559	570333..570983 [+], 651	291286497	putative cytoplasmic protein
16	Dacet_0560	570940..571941 [+], 1002	291286498	TraU family protein	TraU_F
17	Dacet_0561	571911..572645 [+], 735	291286499	glutaredoxin	TraF_F
18	Dacet_0562	572727..572942 [+], 216	291286500	hypothetical protein
19	Dacet_0563	572939..573139 [-], 201	291286501	hypothetical protein
20	Dacet_0564	573117..576848 [-], 3732	291286502	hypothetical protein
21	Dacet_0565	576848..578209 [-], 1362	291286503	TraH family protein	TraH_F
22	Dacet_0567	578467..579513 [+], 1047	291286504	hypothetical protein
23	Dacet_0568	579563..580153 [+], 591	291286505	hypothetical protein
24	Dacet_0569	580189..580713 [-], 525	291286506	Exonuclease RNase T and DNA polymerase III
25	Dacet_0570	580736..581656 [-], 921	291286507	transcriptional regulator protein-like protein

Region 2: 603634..613175

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Dacet_0583	599177..599928 [-], 752	291286519	transposase-like protein
2	Dacet_0584	601557..602414 [+], 858	291286520	hypothetical protein
3	Dacet_0585	602421..602726 [-], 306	291286521	putative cytoplasmic protein
4	Dacet_0586	602713..603417 [-], 705	291286522	hypothetical protein
5	Dacet_0587	603410..603625 [-], 216	291286523	hypothetical protein
6	Dacet_0588	603634..605802 [-], 2169	291286524	hypothetical protein
7	Dacet_0589	605792..606526 [-], 735	291286525	type-F conjugative transfer system pilin assembly protein TrbC
8	Dacet_0590	606486..606923 [-], 438	291286526	type IV secretory protease
9	Dacet_0591	606923..610228 [-], 3306	291286527	proteinase inhibitor I2 Kunitz metazoa	TraN_F
10	Dacet_0592	610225..611874 [-], 1650	291286528	metal dependent phosphohydrolase
11	Dacet_0593	611871..613175 [-], 1305	291286529	DNA transfer in the process of conjugation and F pilus assembly protein	TraD_F
12	Dacet_0594	613223..613504 [+], 282	291286530	plasmid maintenance system killer protein
13	Dacet_0595	613517..613819 [+], 303	291286531	XRE family plasmid maintenance system antidote protein
14	Dacet_0596	613828..614511 [-], 684	291286532	hypothetical protein
15	Dacet_0597	614502..614696 [-], 195	291286533	hypothetical protein
16	Dacet_0598	614763..615104 [-], 342	291286534	single-strand binding protein
17	Dacet_0599	615244..617292 [+], 2049	291286535	Ig family protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_013943