SecReT4

T4SS
References

T4SS ID	518
Strain	Vibrio vulnificus YJ016
Replicon	plasmid pYJ016 [Browse all T4SS(s) in this replicon]
Accession	NC_005128
Location	1648..28855
Name	Tra_F
Function	conjugation
Classification	Type IVA; Type F
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	0	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	1	1	1

The information of T4SS components from NC_005128

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	VVP01	1142..1669 [+], 528	37595822	hypothetical protein
2	VVP02	1648..1824 [+], 177	37595823	putative conjugative transfer protein TraY	TraY_F
3	VVP03	1720..1902 [-], 183	37595824	hypothetical protein
4	VVP04	2190..2477 [+], 288	37595825	putative conjugative transfer protein TraA	TraA_F
5	VVP05	2487..2789 [+], 303	37595826	putative conjugative transfer protein TraL	TraL_F
6	VVP06	2777..3379 [+], 603	37595827	putative conjugative transfer protein TraE	TraE_F
7	VVP07	3366..4151 [+], 786	37595828	putative conjugative transfer protein TraK	TraK_F
8	VVP08	3862..5673 [+], 1812	37595829	putative conjugative transfer protein TraB	TraB_F
9	VVP09	5679..6071 [+], 393	37595830	hypothetical protein
10	VVP10	6081..8633 [+], 2553	37595831	putative conjugative transfer protein TraC	TraC_F
11	VVP11	8518..9315 [+], 798	37595832	putative conjugative transfer protein TraW	TraW_F
12	VVP12	9312..10322 [+], 1011	37595833	putative conjugative transfer protein TraU	TraU_F
13	VVP13	10332..10565 [+], 234	37595834	hypothetical protein
14	VVP14	10579..11292 [+], 714	37595835	putative conjugative transfer protein TrbC	TrbC_F
15	VVP15	11320..13053 [+], 1734	37595836	conjugal transfer mating pair stabilization protein TraN	TraN_F
16	VVP16	13013..13879 [+], 867	37595837	putative conjugative transfer protein TraF	TraF_F
17	VVP18	13895..14029 [-], 135	37595838	hypothetical protein
18	VVP17	13897..14310 [+], 414	37595839	putative conjugative transfer protein TrbB
19	VVP19	14307..15713 [+], 1407	37595840	putative conjugative transfer protein TraH	TraH_F
20	VVP20	15717..18527 [+], 2811	37595841	putative conjugative transfer protein TraG	TraG_F
21	VVP21	18610..19143 [+], 534	37595842	hypothetical protein
22	VVP22	19188..19355 [+], 168	37595843	hypothetical protein
23	VVP23	19288..19467 [+], 180	37595844	hypothetical protein
24	VVP24	19448..21565 [+], 2118	37595845	putative conjugative transfer protein TraD	TraD_F
25	VVP26	21593..21742 [-], 150	37595846	hypothetical protein
26	VVP25	21699..27473 [+], 5775	37595847	putative conjugative transfer protein TraI	TraI_F
27	VVP27	27492..27851 [-], 360	37595848	hypothetical protein
28	VVP28	28182..28316 [+], 135	37595849	hypothetical protein
29	VVP29	28409..28855 [-], 447	37595850	putative PilT protein	Orf169_F
30	VVP30	28937..30319 [-], 1383	37595851	hypothetical protein
31	VVP31	30628..30819 [-], 192	37595852	hypothetical protein
32	VVP32	30895..31191 [-], 297	37595853	hypothetical protein
33	VVP34	31267..31566 [-], 300	37595854	hypothetical protein
34	VVP33	31312..31491 [+], 180	37595855	hypothetical protein
35	VVP35	31604..31822 [-], 219	37595856	hypothetical protein
36	VVP36	31860..32009 [+], 150	37595857	hypothetical protein
37	VVP37	31867..32025 [-], 159	37595858	hypothetical protein
38	VVP38	32038..32412 [-], 375	37595859	hypothetical protein
39	VVP39	32428..32736 [-], 309	37595860	hypothetical protein
40	VVP40	32739..33242 [-], 504	37595861	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Chen CY; Wu KM; Chang YC; Chang CH; Tsai HC; Liao TL; Liu YM; Chen HJ; Shen AB; Li JC; Su TL; Shao CP; Lee CT; Hor LI; Tsai SF (2003). Comparative genome analysis of Vibrio vulnificus, a marine pathogen. Genome Res. 13(12):2577-87. [PudMed:14656965]