SecReT4

T4SS
References

T4SS ID	592
Strain	Proteus vulgaris plasmid Rts1 (NC_003905)
Replicon	plasmid Rts1 [Browse all T4SS(s) in this replicon]
Accession	NC_003905
Location	137437..158579; 174795..186259
Name	Tra_F
Function	conjugation
Classification	Type IVA; Type F
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_003905
Region 1: 137437..158579

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ST585_p159 (orf191)	132842..134074 [+], 1233	21233853	hypothetical protein
2	ST585_p158 (orf192)	134131..134796 [+], 666	21233854	hypothetical protein
3	ST585_p157 (orf193)	134829..136304 [-], 1476	21233855	helicase
4	ST585_p156 (orf194)	136642..137022 [+], 381	21233856	hypothetical protein
5	ST585_p155 (orf195)	137071..137370 [+], 300	21233857	hypothetical protein
6	ST585_p154 (orf196)	137437..137775 [-], 339	21233858	putative innermembrane protein	TraA_F
7	ST585_p153 (orf197)	138078..138743 [+], 666	21233859	EDTA-resistant nuclease
8	ST585_p152 (orf198)	138797..139198 [-], 402	21233860	outer surface protein
9	ST585_p151 (orf199)	139221..140129 [-], 909	21233861	hypothetical membrane protein
10	ST585_p148 (orf200)	140158..140739 [-], 582	21233862	hypothetical protein
11	ST585_p147 (orf201)	140885..143563 [+], 2679	21233863	DNA helicase	TraI_F
12	ST585_p146 (orf202)	143556..145523 [+], 1968	21233864	DNA transfer	TraD_F
13	ST585_p145 (orf203)	145536..145913 [+], 378	21233865	hypothetical protein
14	ST585_p144 (orf204)	145906..146565 [+], 660	21233866	hypothetical protein
15	ST585_p143 (orf205)	146678..146968 [+], 291	21233867	hypothetical protein
16	ST585_p142 (orf206)	146969..147814 [+], 846	21233868	hypothetical protein
17	ST585_p141 (orf207)	147871..148155 [+], 285	21233869	pilus biogenesis protein	TraL_F
18	ST585_p140 (orf208)	148152..148769 [+], 618	21233870	pilus biogenesis protein	TraE_F
19	ST585_p139 (orf209)	148769..149935 [+], 1167	21233871	hypothetical protein	TraK_F
20	ST585_p137 (orf210)	149932..151290 [+], 1359	21233872	pilus biogenesis protein	TraB_F
21	ST585_p136 (orf211)	151287..151877 [+], 591	21233873	pilus biogenesis protein	TraV_F
22	ST585_p135 (orf212)	152192..152938 [+], 747	21233874	disulfide bond isomerase
23	ST585_p134 (orf213)	152959..155445 [+], 2487	21233875	pilus biogenesis protein	TraC_F
24	ST585_p133 (orf214)	155442..155717 [+], 276	21233876	hypothetical protein
25	ST585_p132 (orf215)	155807..156259 [+], 453	21233877	signal peptidase
26	ST585_p131 (orf216)	156253..157503 [+], 1251	21233878	pilus biogenesis protein	TraW_F
27	ST585_p130 (orf217)	157503..158579 [+], 1077	21233879	pilus biogenesis protein	TraU_F
28	ST585_p129 (orf218)	158710..159525 [-], 816	21233880	hypothetical protein
29	ST585_p128 (orf219)	159816..159977 [+], 162	21233881	hypothetical protein
30	ST585_p126 (orf220)	160090..160767 [+], 678	21233882	nickase
31	ST585_p125 (orf221)	161303..161836 [+], 534	21233883	hypothetical protein
32	ST585_p124 (orf222)	161889..162716 [+], 828	21233884	single-strand DNA binding protein

Region 2: 174795..186259

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ST585_p114 (orf231)	170112..171017 [+], 906	21233893	transposase
2	ST585_p113 (orf232)	171029..171301 [+], 273	21233894	hypothetical protein
3	ST585_p112 (orf233)	171379..172191 [+], 813	21233895	hypothetical protein
4	ST585_p111 (orf234)	172239..172718 [+], 480	21233896	hypothetical protein
5	ST585_p110 (orf235)	172895..173275 [+], 381	21233897	hypothetical protein
6	ST585_p109 (orf236)	173294..173524 [+], 231	21233898	hypothetical protein
7	ST585_p108 (orf237)	173560..173943 [+], 384	21233899	hypothetical protein
8	ST585_p107 (orf238)	174024..174203 [+], 180	21233900	hypothetical protein
9	ST585_p106 (orf239)	174479..174805 [+], 327	21233901	hypothetical protein
10	ST585_p104 (orf240)	174795..175886 [+], 1092	21233902	pilus biogenesis protein	TraF_F
11	ST585_p103 (orf241)	175900..177351 [+], 1452	21233903	pilus biogenesis protein	TraH_F
12	ST585_p102 (orf242)	177361..180657 [+], 3297	21233904	pilus biogenesis and aggregate stabilisation protein	TraG_F
13	ST585_p101 (orf243)	180672..180827 [+], 156	21233905	hypothetical protein
14	ST585_p100 (orf244)	181127..183829 [+], 2703	21233906	aggregate stabilisation protein	TraN_F
15	ST585_p099 (orf245)	183884..184663 [-], 780	21233907	hypothetical protein
16	ST585_p098 (orf246)	184694..185185 [-], 492	21233908	transcriptional activator
17	ST585_p097 (orf247)	185182..185706 [-], 525	21233909	hypothetical protein
18	ST585_p096 (orf248)	185699..186259 [-], 561	21233910	hypothetical protein	Orf169_F
19	ST585_p095 (orf249)	186278..186859 [-], 582	21233911	merozoite surface protein 2
20	ST585_p093 (orf250)	186878..187957 [-], 1080	21233912	rod shape determination protein
21	ST585_p092 (orf251)	188286..188534 [+], 249	21233913	hypothetical protein
22	ST585_p091 (orf252)	188766..189221 [+], 456	21233914	hypothetical protein
23	ST585_p090 (orf253)	189278..189766 [+], 489	21233915	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Murata T; Ohnishi M; Ara T; Kaneko J; Han CG; Li YF; Takashima K; Nojima H; Nakayama K; Kaji A; Kamio Y; Miki T; Mori H; Ohtsubo E; Terawaki Y; Hayashi T (2002). Complete nucleotide sequence of plasmid Rts1: implications for evolution of large plasmid genomes. J Bacteriol. 184(12):3194-202. [PudMed:12029035]