SecReT4

T4SS
References

T4SS ID	552
Strain	Syntrophus aciditrophicus SB
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_007759
Location	1740702..1765815
Name	Tra_F
Function	conjugation
Classification	Type IVA; Type F
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	1	1	0	1	1	1	1	0
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_007759

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SYN_01855	1736672..1737712 [+], 1041	85859513	DeoR family transcriptional regulator
2	SYN_01856	1737764..1738783 [+], 1020	85859514	cytoplasmic protein
3	SYN_01857	1739002..1739682 [+], 681	85859515	OmpA family outer membrane protein
4	SYN_01858	1739692..1740411 [+], 720	85859516	protein-disulfide isomerase
5	SYN_01859	1740413..1740730 [+], 318	85859517	hypothetical protein
6	SYN_01860	1740702..1741010 [+], 309	85859518	hypothetical protein	TraL_F
7	SYN_01861	1741007..1741591 [+], 585	85859519	sex pilus assembly/synthesis protein	TraE_F
8	SYN_01862	1741588..1742442 [+], 855	85859520	hypothetical protein	TraK_F
9	SYN_01863	1742432..1743625 [+], 1194	85859521	pilus assembly protein	TraB_F
10	SYN_01864	1743622..1744065 [+], 444	85859522	hypothetical protein	TraV_F
11	SYN_01865	1744023..1746557 [+], 2535	85859523	sex pilus assembly protein	TraC_F
12	SYN_01866	1746508..1748529 [+], 2022	85859524	hypothetical protein
13	SYN_01867	1748529..1752758 [+], 4230	85859525	hypothetical protein	TraN_F
14	SYN_01868	1752736..1753569 [+], 834	85859526	cytoplasmic protein	TraW_F
15	SYN_01869	1753532..1754551 [+], 1020	85859527	conjugal DNA transfer protein	TraU_F
16	SYN_01870	1754437..1755396 [+], 960	85859528	cytoplasmic protein
17	SYN_01871	1755393..1755791 [+], 399	85859529	hypothetical protein
18	SYN_01872	1755760..1756245 [+], 486	85859530	type IV secretory protease
19	SYN_01873	1756226..1757128 [+], 903	85859531	hypothetical protein	TraF_F
20	SYN_01874	1757139..1758605 [+], 1467	85859532	pilus assembly protein	TraH_F
21	SYN_01875	1758625..1761663 [+], 3039	85859533	DNA transfer and F pilus assembly protein	TraG_F
22	SYN_01876	1761693..1761998 [+], 306	85859534	cytoplasmic protein
23	SYN_01877	1762048..1762920 [+], 873	85859535	transcriptional regulator
24	SYN_01879	1762898..1763791 [+], 894	85859536	cytoplasmic protein
25	SYN_01880	1763788..1764042 [+], 255	85859537	hypothetical protein
26	SYN_01881	1764153..1764539 [-], 387	85859538	Cro/CI family transcriptional regulator
27	SYN_01882	1764555..1764764 [-], 210	85859539	cytoplasmic protein
28	SYN_01883	1764942..1765289 [+], 348	85859540	DNA topoisomerase III
29	SYN_01884	1765405..1765815 [+], 411	85859541	soluble lytic murein transglycosylase	Orf169_F
30	SYN_01885	1765812..1766564 [+], 753	85859542	cytoplasmic protein
31	SYN_01886	1766561..1767922 [+], 1362	85859543	DNA transfer in the process of conjugation and F pilus assembly protein
32	SYN_01887	1767919..1769310 [+], 1392	85859544	metal dependent phosphohydrolases

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) McInerney MJ; Rohlin L; Mouttaki H; Kim U; Krupp RS; Rios-Hernandez L; Sieber J; Struchtemeyer CG; Bhattacharyya A; Campbell JW; Gunsalus RP (2007). The genome of Syntrophus aciditrophicus: life at the thermodynamic limit of microbial growth. Proc Natl Acad Sci U S A. 104(18):7600-5. [PudMed:17442750]