SecReT4

T4SS
References

T4SS ID	596
Strain	Acidithiobacillus ferrivorans SS3
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_015942
Location	2915918..2934238; 2967379..2985775
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	0
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_015942
Region 1: 2915918..2934238

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Acife_2961	2911033..2911458 [-], 426	344201035	hypothetical protein
2	Acife_2962	2911455..2912072 [-], 618	344201036	hypothetical protein
3	Acife_2963	2912111..2912761 [-], 651	344201037	hypothetical protein
4	Acife_2964	2912767..2913222 [-], 456	344201038	hypothetical protein
5	Acife_2965	2913236..2913457 [-], 222	344201039	hypothetical protein
6	Acife_2966	2913478..2914128 [-], 651	344201040	hypothetical protein
7	Acife_2967	2914259..2914672 [-], 414	344201041	PilT protein domain-containing protein
8	Acife_2968	2914669..2914899 [-], 231	344201042	virulence-associated protein
9	Acife_2969	2915033..2915539 [-], 507	344201043	GCN5-like N-acetyltransferase
10	Acife_2970	2915536..2915814 [-], 279	344201044	hypothetical protein
11	Acife_2971	2915918..2919280 [-], 3363	344201045	TraG domain-containing protein	TraG_F
12	Acife_2972	2919305..2920924 [-], 1620	344201046	TraH family protein	TraH_F
13	Acife_2973	2920935..2921900 [-], 966	344201047	pilus assembly protein TraF	TraF_F
14	Acife_2974	2921897..2922409 [-], 513	344201048	lytic transglycosylase	Orf169_F
15	Acife_2975	2922529..2922651 [+], 123	344201049	hypothetical protein
16	Acife_2976	2922638..2922904 [+], 267	344201050	hypothetical protein
17	Acife_2977	2922909..2923046 [+], 138	344201051	hypothetical protein
18	Acife_2978	2923055..2923228 [+], 174	344201052	hypothetical protein
19	Acife_2979	2923267..2924187 [-], 921	344201053	hypothetical protein
20	Acife_2980	2924187..2926601 [-], 2415	344201054	metal-dependent phosphohydrolase HD region
21	Acife_2981	2926841..2928178 [+], 1338	344201055	transposase IS4 family protein
22	Acife_2982	2928182..2929090 [+], 909	344201056	hypothetical protein
23	Acife_2983	2929138..2929482 [-], 345	344201057	hypothetical protein
24	Acife_2984	2929494..2930273 [-], 780	344201058	hypothetical protein
25	Acife_2985	2930422..2931837 [-], 1416	344201059	HNH endonuclease
26	Acife_2986	2932129..2932416 [-], 288	344201060	hypothetical protein
27	Acife_2987	2932409..2934238 [-], 1830	344201061	lipoprotein	TraD_F
28	Acife_2988	2934318..2934728 [-], 411	344201062	single-strand binding protein
29	Acife_2989	2934955..2935905 [-], 951	344201063	hypothetical protein
30	Acife_2990	2935899..2937263 [-], 1365	344201064	DNA topoisomerase type IA central domain-containing protein
31	Acife_2991	2937393..2937848 [+], 456	344201065	hypothetical protein
32	Acife_2992	2938021..2938284 [+], 264	344201066	hypothetical protein

Region 2: 2967379..2985775

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Acife_3030	2962796..2963353 [-], 558	344201103	hypothetical protein
2	Acife_3031	2963353..2964603 [-], 1251	344201104	conserved domain-containing protein
3	Acife_3032	2964603..2965610 [-], 1008	344201105	hypothetical protein
4	Acife_3033	2965621..2966679 [-], 1059	344201106	hypothetical protein
5	Acife_3034	2966716..2967057 [-], 342	344201107	transcriptional modulator of MazE/toxin, MazF
6	Acife_3035	2967057..2967296 [-], 240	344201108	transcriptional regulator/antitoxin, MazE
7	Acife_3036	2967379..2970438 [-], 3060	344201109	conjugal transfer protein TraN	TraN_F
8	Acife_3037	2970442..2971701 [-], 1260	344201110	TraU family protein	TraU_F
9	Acife_3038	2971703..2972968 [-], 1266	344201111	type-F conjugative transfer system pilin assembly protein TrbC	TraW_F
10	Acife_3039	2972965..2973765 [-], 801	344201112	hypothetical protein
11	Acife_3040	2973779..2974840 [-], 1062	344201113	hypothetical protein
12	Acife_3041	2974854..2975378 [-], 525	344201114	peptidase S26
13	Acife_3042	2975371..2975901 [-], 531	344201115	hypothetical protein
14	Acife_3043	2975898..2978492 [-], 2595	344201116	type-IV secretion system protein TraC	TraC_F
15	Acife_3044	2978489..2979175 [-], 687	344201117	DsbA family thiol:disulfide interchange protein
16	Acife_3045	2979172..2980374 [-], 1203	344201118	type II secretion system protein E
17	Acife_3046	2980374..2981201 [-], 828	344201119	thiol:disulfide interchange domain-containing protein
18	Acife_3047	2981201..2981605 [-], 405	344201120	conjugal transfer protein TraA	TraA_F
19	Acife_3048	2981649..2982179 [-], 531	344201121	type IV conjugative transfer system protein TraV	TraV_F
20	Acife_3049	2982176..2983735 [-], 1560	344201122	conjugal transfer protein	TraB_F
21	Acife_3050	2983729..2984895 [-], 1167	344201123	TraK lipoprotein	TraK_F
22	Acife_3051	2984892..2985500 [-], 609	344201124	type IV conjugative transfer system protein TraE	TraE_F
23	Acife_3052	2985497..2985775 [-], 279	344201125	type IV conjugative transfer system protein TraL	TraL_F
24	Acife_3053	2985763..2986530 [-], 768	344201126	hypothetical protein
25	Acife_3054	2986592..2987962 [-], 1371	344201127	HNH endonuclease
26	Acife_3055	2988249..2988557 [-], 309	344201128	hypothetical protein
27	Acife_3056	2988560..2989708 [-], 1149	344201129	hypothetical protein
28	Acife_3057	2989701..2989952 [-], 252	344201130	hypothetical protein
29	Acife_3058	2989942..2990292 [-], 351	344201131	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_015942