SecReT4

T4SS
References

T4SS ID	106
Strain	Escherichia coli plasmid pETN48 (NC_014615)
Replicon	plasmid pETN48 [Browse all T4SS(s) in this replicon]
Accession	NC_014615
Location	1574..35145
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	1	1	1	1	0	1	1
Component	TraY_F	TrbC_F	Orf169_F
Number	1	1	1

The information of T4SS components from NC_014615

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ETN48_p0001 (yubO)	51..338 [+], 288	310286350	hypothetical protein
2	ETN48_p0002 (yubP)	348..1277 [+], 930	310286351	hypothetical protein
3	ETN48_p0003 (yubQ)	1574..2176 [-], 603	310286352	transglycosylase	Orf169_F
4	ETN48_p0004 (traM)	2497..2880 [+], 384	310286353	conjugal transfer protein M	TraM_F
5	ETN48_p0005 (traJ)	3067..3756 [+], 690	310286354	positive regulator of conjugal transfer operon
6	ETN48_p0006 (traY)	3849..4250 [+], 402	310286355	oriT nicking conjugative transfer protein	TraY_F
7	ETN48_p0007 (traA)	4283..4648 [+], 366	310286356	fimbrial protein precursor TraA	TraA_F
8	ETN48_p0008 (traL)	4663..4974 [+], 312	310286357	F pilus assembly protein TraL	TraL_F
9	ETN48_p0009 (traE)	4996..5562 [+], 567	310286358	F pilus assembly protein TraE	TraE_F
10	ETN48_p0010 (traK)	5549..6277 [+], 729	310286359	F pilus assembly protein TraK	TraK_F
11	ETN48_p0011 (traB)	6277..7704 [+], 1428	310286360	F pilus assembly protein TraB	TraB_F
12	ETN48_p0012 (traP)	7694..8284 [+], 591	310286361	conjugal transfert protein TraP
13	ETN48_p0013 (trbD)	8238..8468 [+], 231	310286362	hypothetical protein
14	ETN48_p0014 (trbG)	8480..8731 [+], 252	310286363	conjugal transfer protein TrbG
15	ETN48_p0015 (tnp)	8866..9192 [+], 327	310286364	transposase
16	ETN48_p0016 (tnp)	9192..10079 [+], 888	310286365	transposase
17	ETN48_p0018 (traR)	10686..10907 [+], 222	310286366	conjugal transfer protein TraR
18	ETN48_p0019 (traC)	11067..13694 [+], 2628	310286367	F pilus assembly protein TraC	TraC_F
19	ETN48_p0021 (trbI)	13691..14077 [+], 387	310286368	F pilus extension/retraction protein TrbI
20	ETN48_p0022 (traW)	14074..14706 [+], 633	310286369	F pilus assembly protein TraW	TraW_F
21	ETN48_p0023 (traU)	14703..15695 [+], 993	310286370	conjugal transfer protein TraU	TraU_F
22	ETN48_p0024 (trbC)	15701..16342 [+], 642	310286371	F pilus assembly protein TrbC	TrbC_F
23	ETN48_p0025 (traN)	16339..18147 [+], 1809	310286372	conjugal transfer mating contact stabilization protein TraN	TraN_F
24	ETN48_p0026 (trbE)	18174..18431 [+], 258	310286373	conjugal transfer protein TrbE
25	ETN48_p0027 (traF)	18394..19167 [+], 774	310286374	conjugal pilus assembly protein TraF	TraF_F
26	ETN48_p0028 (trbA)	19181..19522 [+], 342	310286375	protein trbA
27	ETN48_p0029 (artA)	19503..19838 [-], 336	310286376	protein artA
28	ETN48_p0030 (traQ)	19919..20203 [+], 285	310286377	F pilin synthesis protein TraQ	TraQ_F
29	ETN48_p0031 (trbB)	20190..20744 [+], 555	310286378	disulfide bond isomerase TrbB
30	ETN48_p0032 (trbJ)	20641..21048 [+], 408	310286379	conjugal transfer protein TrbJ
31	ETN48_p0033 (TrbF)	21002..21394 [+], 393	310286380	TrbF protein
32	ETN48_p0034 (traH)	21378..22754 [+], 1377	310286381	F pilus assembly protein TraH	TraH_F
33	ETN48_p0035 (traG)	22751..25576 [+], 2826	310286382	mating contact stabilization protein TraG	TraG_F
34	ETN48_p0036 (traS)	25573..26082 [+], 510	310286383	conjugal transfer entry exclusion protein TraS
35	ETN48_p0037 (traT)	26096..26827 [+], 732	310286384	complement resistance and surface exclusion outer membrane protein TraT
36	ETN48_p0038 (traD)	27079..29259 [+], 2181	310286385	conjugal transfer coupling protein TraD	TraD_F
37	ETN48_p0039 (traI)	29259..34379 [+], 5121	310286386	protein TraI (DNA helicase I)	TraI_F
38	ETN48_p0040 (traX)	34342..35145 [+], 804	310286387	F pilin acetylase traX	TraX_F
39	ETN48_p0041 (finO)	35200..35760 [+], 561	310286388	fertility inhibition protein FinO (Conjugal transfer repressor)
40	ETN48_p0042 (yigA)	35894..36106 [+], 213	310286389	hypothetical protein
41	ETN48_p0044	37212..37391 [+], 180	310286390	hypothetical protein
42	ETN48_p194 (srnB)	37473..37784 [+], 312	310286391	modulator of post-segregation killing protein SrnB
43	ETN48_p0045	37934..38101 [-], 168	310286392	hypothetical protein
44	ETN48_p0046 (repA2)	38068..38325 [+], 258	310286393	replication regulatory protein RepA2 (CopB)
45	ETN48_p0048	39186..39305 [-], 120	310286394	hypothetical protein
46	ETN48_p0049	39308..39553 [-], 246	310286395	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_014615