SecReT4

T4SS
References

T4SS ID	582
Strain	Escherichia coli plasmid pAR060302 (NC_012692)
Replicon	plasmid pAR060302 [Browse all T4SS(s) in this replicon]
Accession	NC_012692
Location	48097..80693; 155402..163413
Name	Tra_F
Function	conjugation
Classification	Type IVA; Type F
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_012692
Region 1: 48097..80693

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pAR060302_0063	43183..43800 [+], 618	237809970	hypothetical protein
2	pAR060302_0064	44033..44311 [+], 279	237809971	hypothetical protein
3	pAR060302_0065	44402..44890 [-], 489	237809972	hypothetical protein
4	pAR060302_0066 (topB)	44905..47097 [-], 2193	237809973	TopB
5	pAR060302_0067	47097..47330 [-], 234	237809974	hypothetical protein
6	pAR060302_0068	47312..47944 [-], 633	237809975	hypothetical protein
7	pAR060302_0069 (traI)	48097..51069 [+], 2973	237809976	TraI	TraI_F
8	pAR060302_0070 (traD)	51066..52931 [+], 1866	237809977	TraD	TraD_F
9	pAR060302_0071	52942..53526 [+], 585	237809978	hypothetical protein
10	pAR060302_0072	53483..54112 [+], 630	237809979	hypothetical protein
11	pAR060302_0073	54122..54568 [+], 447	237809980	hypothetical protein
12	pAR060302_0074	54578..54955 [+], 378	237809981	hypothetical protein
13	pAR060302_0075	55027..55617 [+], 591	237809982	hypothetical protein
14	pAR060302_0076	55941..56318 [+], 378	237809983	hypothetical protein
15	pAR060302_0077 (traL)	56463..56744 [+], 282	237809984	TraL	TraL_F
16	pAR060302_0078 (traE)	56741..57367 [+], 627	237809985	TraE	TraE_F
17	pAR060302_0079	57351..58268 [+], 918	237809986	TraK family protein	TraK_F
18	pAR060302_0080 (traB)	58265..59581 [+], 1317	237809987	TraB	TraB_F
19	pAR060302_0081 (traV)	59578..60156 [+], 579	237809988	TraV	TraV_F
20	pAR060302_0082 (traA)	60160..60552 [+], 393	237809989	TraA	TraA_F
21	pAR060302_0083	60837..62099 [+], 1263	237809990	transposase InsC3 for insertion sequence ISEc9
22	pAR060302_0084 (ampC)	62423..63568 [+], 1146	237809991	beta-lactamase
23	pAR060302_0085 (blc1)	63662..64195 [+], 534	237809992	outer membrane lipoprotein Blc
24	pAR060302_0086 (sugE1)	64192..64632 [-], 441	237809993	SugE1
25	pAR060302_0087	64766..65191 [+], 426	237809994	hypothetical protein
26	pAR060302_0088	65237..70723 [+], 5487	237809995	hypothetical protein
27	pAR060302_0089	70872..71579 [+], 708	237809996	hypothetical protein
28	pAR060302_0090 (traC)	71576..74023 [+], 2448	237809997	TraC	TraC_F
29	pAR060302_0091	74038..74355 [+], 318	237809998	hypothetical protein
30	pAR060302_0092 (trhF)	74352..74882 [+], 531	237809999	TrhF
31	pAR060302_0093 (traW)	74845..76110 [+], 1266	237810000	TraW	TraW_F
32	pAR060302_0094	76107..76778 [+], 672	237810001	hypothetical protein
33	pAR060302_0095 (traU)	76775..77782 [+], 1008	237810002	TraU	TraU_F
34	pAR060302_0096 (traN)	77886..80693 [+], 2808	237810003	conjugal transfer mating pair stabilization protein TraN	TraN_F
35	pAR060302_0097	80732..81592 [-], 861	237810004	hypothetical protein
36	pAR060302_0098	81715..82356 [-], 642	237810005	hypothetical protein
37	pAR060302_0099	82570..82971 [+], 402	237810006	hypothetical protein
38	pAR060302_0100	83209..83460 [+], 252	237810007	hypothetical protein
39	pAR060302_0101	83680..84648 [+], 969	237810008	ATPase associated with various cellular activities (AAA) family protein
40	pAR060302_0102	84659..85567 [+], 909	237810009	hypothetical protein

Region 2: 155402..163413

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pAR060302_0176	150586..151077 [+], 492	237810082	hypothetical protein
2	pAR060302_0177 (ter)	151404..152279 [+], 876	237810083	DNA replication terminus site-binding protein
3	pAR060302_0178	152441..153481 [+], 1041	237810084	hypothetical protein
4	pAR060302_0179	153768..155279 [+], 1512	237810085	UvrD/REP helicase family protein
5	pAR060302_0180 (traF)	155402..156430 [+], 1029	237810086	TraF	TraF_F
6	pAR060302_0181 (traH)	156432..157865 [+], 1434	237810087	TraH	TraH_F
7	pAR060302_0182 (traG)	157878..161492 [+], 3615	237810088	TraG	TraG_F
8	pAR060302_0183	161530..161892 [-], 363	237810089	hypothetical protein
9	pAR060302_0184	162608..162880 [+], 273	237810090	hypothetical protein
10	pAR060302_0185	162880..163413 [+], 534	237810091	transglycosylase SLT domain containing protein	Orf169_F
11	pAR060302_0186	163424..164032 [+], 609	237810092	hypothetical protein
12	pAR060302_0187	164029..164580 [+], 552	237810093	hypothetical protein
13	pAR060302_0188	164640..165059 [-], 420	237810094	hypothetical protein
14	pAR060302_0189	165061..165354 [-], 294	237810095	hypothetical protein
15	pAR060302_0190	165371..166354 [-], 984	237810096	StbA

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Call DR; Singer RS; Meng D; Broschat SL; Orfe LH; Anderson JM; Herndon DR; Kappmeyer LS; Daniels JB; Besser TE (2010). blaCMY-2-positive IncA/C plasmids from Escherichia coli and Salmonella enterica are a distinct component of a larger lineage of plasmids. Antimicrob Agents Chemother. 54(2):590-6. [PudMed:19949054]